RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 ARID3AQ99856 593 aa2.44□□□□□ -2.02
RNU6-1054P-201ENST00000411293 POLR3EQ9NVU0 708 aa2.44□□□□□ -2.02
RNU6-1054P-201ENST00000411293 DAXXQ9UER7 740 aaPredicted RBP2.44□□□□□ -2.02
RNU6-1054P-201ENST00000411293 ALDH1A1P00352 501 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 SSTR3P32745 418 aaPredicted RBP2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 RASSF7Q02833 373 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 RC3H1Q5TC82 1133 aaKnown RBP2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 BRICD5Q6PL45 260 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 RDH13Q8NBN7 331 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 PROCA1Q8NCQ7 364 aaPredicted RBP2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 PXYLP1Q8TE99 480 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 SLC27A5Q9Y2P5 690 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 DNMT3AQ9Y6K1 912 aaPredicted RBP2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 WASF2Q9Y6W5 498 aa2.43□□□□□ -2.02
RNU6-1054P-201ENST00000411293 ARID3CA6NKF2 412 aa2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 FUT2Q10981 343 aa2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 KANK3Q6NY19 840 aa2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 GIGYF2Q6Y7W6 1299 aaKnown RBP2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 KRTAP19-1Q8IUB9 90 aa2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 Q8N3U1 123 aa2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 ERBB4Q15303 1308 aa2.42□□□□□ -2.02
RNU6-1054P-201ENST00000411293 COBLO75128 1261 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 DXOO77932 396 aaKnown RBP2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 GCGRP47871 477 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 GSK3AP49840 483 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 CSPP1Q1MSJ5 1256 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 TRIM46Q7Z4K8 759 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 USB1Q9BQ65 265 aaKnown RBP2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 BEGAINQ9BUH8 593 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 ZMYND15Q9H091 742 aa2.41□□□□□ -2.02
RNU6-1054P-201ENST00000411293 DDX11L8A8MPP1 907 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 ADAM23O75077 832 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 BMP1P13497 986 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 VEGFBP49765 207 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 AMHR2Q16671 573 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 METTL3Q86U44 580 aaKnown RBP2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 EHBP1Q8NDI1 1231 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 CLUAP1Q96AJ1 413 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SCARF2Q96GP6 870 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 ZFP42Q96MM3 310 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 PRDM9Q9NQV7 894 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 ADAMTS8Q9UP79 889 aa2.4□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SIAH2O43255 324 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 UBTFP17480 764 aaKnown RBP2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SKOR1P84550 965 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 FBXO31Q5XUX0 539 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 GPAT2Q6NUI2 795 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MRPL14Q6P1L8 145 aaKnown RBP2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 RNF19BQ6ZMZ0 732 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 CCDC24Q8N4L8 307 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MPNDQ8N594 471 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 DDRGK1Q96HY6 314 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 PCMTD1Q96MG8 357 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 GPCPD1Q9NPB8 672 aa2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 ZNF777Q9ULD5 760 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1054P-201ENST00000411293 APBB1O00213 710 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MAN1A2O60476 641 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 UPP2O95045 317 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 ADH1CP00326 375 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 NDUFV2P19404 249 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 CLCN1P35523 988 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MARSP56192 900 aaKnown RBP2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 USP46P62068 366 aa2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 FAM217BQ9NTX9 383 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1054P-201ENST00000411293 PPFIA3O75145 1194 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 JUNDP17535 347 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SKIV2LQ15477 1246 aaKnown RBP2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 ERICH6Q7L0X2 663 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SVOPQ8N4V2 548 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 POM121Q96HA1 1249 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 PURBQ96QR8 312 aaKnown RBP2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 TBC1D2Q9BYX2 928 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 C1orf115Q9H7X2 142 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SNRKQ9NRH2 765 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 LIMD1Q9UGP4 676 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 PCDHB15Q9Y5E8 787 aa2.37□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MOXD2PA6NHM9 499 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MSTNO14793 375 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 VARSP26640 1264 aaKnown RBP2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 IRS1P35568 1242 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 WDR4P57081 412 aaKnown RBP2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 GUCA2AQ02747 115 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 MYSM1Q5VVJ2 828 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 RIC3Q7Z5B4 369 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 CABLES1Q8TDN4 633 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SPIRE2Q8WWL2 714 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 TSC1Q92574 1164 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 HLA-CQ95604 372 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 RSPH6AQ9H0K4 717 aa2.36□□□□□ -2.03
RNU6-1054P-201ENST00000411293 NUTM2BA6NNL0 878 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 PHF20L1A8MW92 1017 aa2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 NUTM2EB1AL46 878 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 SPTLC1O15269 473 aa2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 KDM4AO75164 1064 aa2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 TIMP2P16035 220 aa2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 NNTQ13423 1086 aa2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 QPCTQ16769 361 aa2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 RTL5Q5HYW3 569 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1054P-201ENST00000411293 NUTM2DQ5VT03 806 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms