RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 YTHDC2Q9H6S0 1430 aaKnown RBP3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 RRBP1Q9P2E9 1410 aaKnown RBP3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 DHX57Q6P158 1386 aaKnown RBP3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 ACIN1Q9UKV3 1341 aaKnown RBP3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 CHRNA2Q15822 529 aa3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 TCP11L2Q8N4U5 519 aa3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 NGDNQ8NEJ9 315 aaKnown RBP3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 THRAP3Q9Y2W1 955 aaKnown RBP3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 CLTCL1P53675 1640 aa3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 BRWD3Q6RI45 1802 aa3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 EIF3AQ14152 1382 aaKnown RBP3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 KIAA0232Q92628 1395 aa3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 PLSCR1O15162 318 aa3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 ZC3H6P61129 1189 aaKnown RBP3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 CFAP70Q5T0N1 1121 aa3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 LARP1Q6PKG0 1096 aaKnown RBP3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 SYT17Q9BSW7 474 aa3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 HIRIP3Q9BW71 556 aaPredicted RBP3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 BCL11BQ9C0K0 894 aaPredicted RBP3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 ADGRB2O60241 1585 aa3.53□□□□□ -1.84
RNU4-53P-201ENST00000410828 NWD2Q9ULI1 1742 aa3.53□□□□□ -1.85
RNU4-53P-201ENST00000410828 MARF1Q9Y4F3 1742 aaKnown RBP3.53□□□□□ -1.85
RNU4-53P-201ENST00000410828 PIK3C2GO75747 1445 aa3.53□□□□□ -1.85
RNU4-53P-201ENST00000410828 KIF1AQ12756 1690 aa3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 WASLO00401 505 aaPredicted RBP3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 GIGYF1O75420 1035 aaPredicted RBP3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 ZBTB7AO95365 584 aa3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 PPARGC1BQ86YN6 1023 aaKnown RBP3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 MPHOSPH9Q99550 1183 aa3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 FHDC1Q9C0D6 1143 aaPredicted RBP3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 ANO8Q9HCE9 1232 aaPredicted RBP3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 STK32BQ9NY57 414 aa3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 TRAK1Q9UPV9 953 aa3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 ATF5Q9Y2D1 282 aaPredicted RBP3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 SPATA31E1Q6ZUB1 1445 aa3.52□□□□□ -1.85
RNU4-53P-201ENST00000410828 MINK1Q8N4C8 1332 aaPredicted RBP3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 PRR36Q9H6K5 1346 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 RGPD1P0DJD0 1748 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 PTGER2P43116 358 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 SLC15A2Q16348 729 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 DDB1Q16531 1140 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 GPR162Q16538 588 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 TXNRD1Q16881 649 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 NUTM2GQ5VZR2 741 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 NLRP13Q86W25 1043 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 PROM2Q8N271 834 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 ABTB2Q8N961 1025 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 ARXQ96QS3 562 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 PDGFDQ9GZP0 370 aaPredicted RBP3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 MTFR1LQ9H019 292 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 PLCH1Q4KWH8 1693 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 SSH2Q76I76 1423 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 KIF1BO60333 1816 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 CPDO75976 1380 aa3.51□□□□□ -1.85
RNU4-53P-201ENST00000410828 FMN2Q9NZ56 1722 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 THSD7AQ9UPZ6 1657 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 GCP02774 474 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 TOM1L2Q6ZVM7 507 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 PTF1AQ7RTS3 328 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 NUDT16Q96DE0 195 aaKnown RBP3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 SGIP1Q9BQI5 828 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 CDCA7Q9BWT1 371 aaPredicted RBP3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 CCDC61Q9Y6R9 512 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 OVOS2A0A0G2JMS6 1433 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 OVOS2A0A0J9YW53 1432 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 OVOS2Q6IE36 1432 aa3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 COL14A1Q05707 1796 aaKnown RBP3.5□□□□□ -1.85
RNU4-53P-201ENST00000410828 ACEP12821 1306 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 PLEKHG3A1L390 1219 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 ZBTB7CA1YPR0 619 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 GRIN3BO60391 1043 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 POLD1P28340 1107 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 PELP1Q8IZL8 1130 aaKnown RBP3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 MARCH10Q8NA82 808 aaPredicted RBP3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 STAC3Q96MF2 364 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 CDK19Q9BWU1 502 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 NRAPQ86VF7 1730 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 MAP3K5Q99683 1374 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 DLC1Q96QB1 1528 aa3.49□□□□□ -1.85
RNU4-53P-201ENST00000410828 PPLO60437 1756 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 ATP7BP35670 1465 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 USP19O94966 1318 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 KNDC1Q76NI1 1749 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 TNS1Q9HBL0 1735 aaKnown RBP3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 BCL9O00512 1426 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 CRB1P82279 1406 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 EXOC5O00471 708 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 CSB-PGBD3P0DP91 1061 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 NLRP6P59044 892 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 KLHL34Q8N239 644 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 DCAF11Q8TEB1 546 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 SLC16A10Q8TF71 515 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 KDM2AQ9Y2K7 1162 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 CAMTA1Q9Y6Y1 1673 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 TULP4Q9NRJ4 1543 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 POLR3AO14802 1390 aaPredicted RBP3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 AATKQ6ZMQ8 1374 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 CEP350Q5VT06 3117 aa3.48□□□□□ -1.85
RNU4-53P-201ENST00000410828 WDR17Q8IZU2 1322 aa3.47□□□□□ -1.85
RNU4-53P-201ENST00000410828 UTRNP46939 3433 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms