RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 TIMP2P16035 220 aa7.56□□□□□ -1.2
RNU2-39P-201ENST00000410604 VARSP26640 1264 aaKnown RBP7.56□□□□□ -1.2
RNU2-39P-201ENST00000410604 SCARF1Q14162 830 aa7.56□□□□□ -1.2
RNU2-39P-201ENST00000410604 CCDC102AQ96A19 550 aa7.56□□□□□ -1.2
RNU2-39P-201ENST00000410604 CLCN1P35523 988 aa7.55□□□□□ -1.2
RNU2-39P-201ENST00000410604 ZNF511Q8NB15 262 aa7.55□□□□□ -1.2
RNU2-39P-201ENST00000410604 ZC3H15Q8WU90 426 aaKnown RBP7.55□□□□□ -1.2
RNU2-39P-201ENST00000410604 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
RNU2-39P-201ENST00000410604 ADH1CP00326 375 aa7.54□□□□□ -1.2
RNU2-39P-201ENST00000410604 GSK3AP49840 483 aa7.54□□□□□ -1.2
RNU2-39P-201ENST00000410604 WDR4P57081 412 aaKnown RBP7.54□□□□□ -1.2
RNU2-39P-201ENST00000410604 KCNH2Q12809 1159 aa7.54□□□□□ -1.2
RNU2-39P-201ENST00000410604 KCNMA1Q12791 1236 aa7.52□□□□□ -1.21
RNU2-39P-201ENST00000410604 ZMYND10O75800 440 aa7.51□□□□□ -1.21
RNU2-39P-201ENST00000410604 PRR7Q8TB68 274 aa7.51□□□□□ -1.21
RNU2-39P-201ENST00000410604 SPIRE2Q8WWL2 714 aa7.51□□□□□ -1.21
RNU2-39P-201ENST00000410604 NDUFV2P19404 249 aa7.5□□□□□ -1.21
RNU2-39P-201ENST00000410604 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
RNU2-39P-201ENST00000410604 MOXD2PA6NHM9 499 aa7.49□□□□□ -1.21
RNU2-39P-201ENST00000410604 PPFIA3O75145 1194 aa7.49□□□□□ -1.21
RNU2-39P-201ENST00000410604 DESI1Q6ICB0 168 aa7.49□□□□□ -1.21
RNU2-39P-201ENST00000410604 ZFAND3Q9H8U3 227 aa7.49□□□□□ -1.21
RNU2-39P-201ENST00000410604 MAN1A2O60476 641 aa7.48□□□□□ -1.21
RNU2-39P-201ENST00000410604 ZIC2O95409 532 aaPredicted RBP7.48□□□□□ -1.21
RNU2-39P-201ENST00000410604 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
RNU2-39P-201ENST00000410604 FAM174AQ8TBP5 190 aa7.48□□□□□ -1.21
RNU2-39P-201ENST00000410604 ITPKCQ96DU7 683 aa7.48□□□□□ -1.21
RNU2-39P-201ENST00000410604 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
RNU2-39P-201ENST00000410604 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
RNU2-39P-201ENST00000410604 KRI1Q8N9T8 703 aaKnown RBP7.47□□□□□ -1.21
RNU2-39P-201ENST00000410604 NR3C2P08235 984 aa7.46□□□□□ -1.22
RNU2-39P-201ENST00000410604 SSTR3P32745 418 aaPredicted RBP7.46□□□□□ -1.22
RNU2-39P-201ENST00000410604 MTMR2Q13614 643 aa7.46□□□□□ -1.22
RNU2-39P-201ENST00000410604 FOXJ1Q92949 421 aa7.46□□□□□ -1.22
RNU2-39P-201ENST00000410604 SPDYE5A6NIY4 337 aa7.45□□□□□ -1.22
RNU2-39P-201ENST00000410604 ARID5BQ14865 1188 aa7.45□□□□□ -1.22
RNU2-39P-201ENST00000410604 CTHP32929 405 aa7.44□□□□□ -1.22
RNU2-39P-201ENST00000410604 KRT76Q01546 638 aa7.44□□□□□ -1.22
RNU2-39P-201ENST00000410604 NR5A1Q13285 461 aa7.44□□□□□ -1.22
RNU2-39P-201ENST00000410604 LYPD8Q6UX82 237 aa7.44□□□□□ -1.22
RNU2-39P-201ENST00000410604 TMEM151AQ8N4L1 468 aa7.44□□□□□ -1.22
RNU2-39P-201ENST00000410604 BMP2P12643 396 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 GRM5P41594 1212 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 RASSF7Q02833 373 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 SLC24A3Q9HC58 644 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 DNMT3LQ9UJW3 386 aa7.43□□□□□ -1.22
RNU2-39P-201ENST00000410604 GDF11O95390 407 aa7.42□□□□□ -1.22
RNU2-39P-201ENST00000410604 MEIOBQ8N635 442 aa7.42□□□□□ -1.22
RNU2-39P-201ENST00000410604 GPR161Q8N6U8 529 aaKnown RBP7.42□□□□□ -1.22
RNU2-39P-201ENST00000410604 SOS2Q07890 1332 aaPredicted RBP7.42□□□□□ -1.22
RNU2-39P-201ENST00000410604 F12P00748 615 aaPredicted RBP7.41□□□□□ -1.22
RNU2-39P-201ENST00000410604 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
RNU2-39P-201ENST00000410604 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
RNU2-39P-201ENST00000410604 CFAP99D6REC4 459 aa7.4□□□□□ -1.22
RNU2-39P-201ENST00000410604 UPP2O95045 317 aa7.4□□□□□ -1.22
RNU2-39P-201ENST00000410604 CNTNAP3BQ96NU0 1288 aa7.4□□□□□ -1.22
RNU2-39P-201ENST00000410604 CNTNAP3Q9BZ76 1288 aa7.4□□□□□ -1.22
RNU2-39P-201ENST00000410604 RNF225M0QZC1 329 aaPredicted RBP7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 SPTLC1O15269 473 aa7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 GJA5P36382 358 aa7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 AGERQ15109 404 aa7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 RSBN1LQ6PCB5 846 aaPredicted RBP7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 AK7Q96M32 723 aa7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 PCDHB15Q9Y5E8 787 aa7.38□□□□□ -1.23
RNU2-39P-201ENST00000410604 TTLL12Q14166 644 aaPredicted RBP7.37□□□□□ -1.23
RNU2-39P-201ENST00000410604 BPHLQ86WA6 291 aaPredicted RBP7.37□□□□□ -1.23
RNU2-39P-201ENST00000410604 HRCP23327 699 aa7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 PTSQ03393 145 aa7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 ZNF385CQ66K41 422 aaPredicted RBP7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 GIGYF2Q6Y7W6 1299 aaKnown RBP7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 TSEN34Q9BSV6 310 aaKnown RBP7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 BEGAINQ9BUH8 593 aa7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 COL25A1Q9BXS0 654 aaPredicted RBP7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 TBC1D2Q9BYX2 928 aa7.36□□□□□ -1.23
RNU2-39P-201ENST00000410604 FSHRP23945 695 aa7.35□□□□□ -1.23
RNU2-39P-201ENST00000410604 AMHR2Q16671 573 aa7.35□□□□□ -1.23
RNU2-39P-201ENST00000410604 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
RNU2-39P-201ENST00000410604 C1QTNF2Q9BXJ5 285 aa7.35□□□□□ -1.23
RNU2-39P-201ENST00000410604 TTLL8A6PVC2 850 aa7.34□□□□□ -1.23
RNU2-39P-201ENST00000410604 TRIM66O15016 1216 aa7.34□□□□□ -1.23
RNU2-39P-201ENST00000410604 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
RNU2-39P-201ENST00000410604 RNFT1Q5M7Z0 435 aa7.34□□□□□ -1.23
RNU2-39P-201ENST00000410604 SH3RF1Q7Z6J0 888 aa7.34□□□□□ -1.23
RNU2-39P-201ENST00000410604 ZBTB3Q9H5J0 574 aa7.34□□□□□ -1.23
RNU2-39P-201ENST00000410604 SVOPQ8N4V2 548 aa7.33□□□□□ -1.24
RNU2-39P-201ENST00000410604 MAP4K5Q9Y4K4 846 aa7.33□□□□□ -1.24
RNU2-39P-201ENST00000410604 DIXDC1Q155Q3 683 aa7.32□□□□□ -1.24
RNU2-39P-201ENST00000410604 VASH1Q7L8A9 365 aaPredicted RBP7.32□□□□□ -1.24
RNU2-39P-201ENST00000410604 CCDC155Q8N6L0 562 aa7.32□□□□□ -1.24
RNU2-39P-201ENST00000410604 WHAMMQ8TF30 809 aa7.32□□□□□ -1.24
RNU2-39P-201ENST00000410604 EMILIN1Q9Y6C2 1016 aa7.32□□□□□ -1.24
RNU2-39P-201ENST00000410604 FIGNL2A6NMB9 653 aa7.31□□□□□ -1.24
RNU2-39P-201ENST00000410604 ARHGEF15O94989 841 aa7.31□□□□□ -1.24
RNU2-39P-201ENST00000410604 PRPF38BQ5VTL8 546 aaKnown RBP7.31□□□□□ -1.24
RNU2-39P-201ENST00000410604 GPAT2Q6NUI2 795 aa7.31□□□□□ -1.24
RNU2-39P-201ENST00000410604 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
RNU2-39P-201ENST00000410604 CCDC116Q8IYX3 515 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms