RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 UPP2O95045 317 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 ZIC2O95409 532 aaPredicted RBP6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 Q8N3U1 123 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 BAP1Q92560 729 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 SYMPKQ92797 1274 aaKnown RBP6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 CFAP44Q96MT7 982 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 SPOCK3Q9BQ16 436 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 ZFAND3Q9H8U3 227 aa6.08□□□□□ -1.44
RNU6-1140P-201ENST00000410517 VARSP26640 1264 aaKnown RBP6.07□□□□□ -1.44
RNU6-1140P-201ENST00000410517 PLA2G4EQ3MJ16 856 aa6.07□□□□□ -1.44
RNU6-1140P-201ENST00000410517 MPNDQ8N594 471 aa6.07□□□□□ -1.44
RNU6-1140P-201ENST00000410517 KCNV2Q8TDN2 545 aa6.07□□□□□ -1.44
RNU6-1140P-201ENST00000410517 DNMT3LQ9UJW3 386 aa6.07□□□□□ -1.44
RNU6-1140P-201ENST00000410517 SLURP2P0DP57 97 aa6.06□□□□□ -1.44
RNU6-1140P-201ENST00000410517 CD46P15529 392 aa6.06□□□□□ -1.44
RNU6-1140P-201ENST00000410517 GUCA2AQ02747 115 aa6.06□□□□□ -1.44
RNU6-1140P-201ENST00000410517 PAXIP1Q6ZW49 1069 aaPredicted RBP6.06□□□□□ -1.44
RNU6-1140P-201ENST00000410517 ITPKCQ96DU7 683 aa6.06□□□□□ -1.44
RNU6-1140P-201ENST00000410517 CCNYL3P0C7X3 344 aa6.05□□□□□ -1.44
RNU6-1140P-201ENST00000410517 USP46P62068 366 aa6.05□□□□□ -1.44
RNU6-1140P-201ENST00000410517 GALNT6Q8NCL4 622 aa6.05□□□□□ -1.44
RNU6-1140P-201ENST00000410517 UNC93B1Q9H1C4 597 aa6.05□□□□□ -1.44
RNU6-1140P-201ENST00000410517 SOS2Q07890 1332 aaPredicted RBP6.04□□□□□ -1.44
RNU6-1140P-201ENST00000410517 K7ELQ4 463 aaPredicted RBP6.04□□□□□ -1.44
RNU6-1140P-201ENST00000410517 PTSQ03393 145 aa6.04□□□□□ -1.44
RNU6-1140P-201ENST00000410517 ARID5BQ14865 1188 aa6.04□□□□□ -1.44
RNU6-1140P-201ENST00000410517 RBM26Q5T8P6 1007 aaKnown RBP6.04□□□□□ -1.44
RNU6-1140P-201ENST00000410517 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
RNU6-1140P-201ENST00000410517 SEMA3EO15041 775 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 HOXA2O43364 376 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 MS4A1P11836 297 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 PLCB2Q00722 1185 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 RETREG3Q86VR2 466 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 ZNF511Q8NB15 262 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 NANOS1Q8WY41 292 aaKnown RBP6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 DCAF5Q96JK2 942 aa6.03□□□□□ -1.44
RNU6-1140P-201ENST00000410517 MAP3K10Q02779 954 aa6.02□□□□□ -1.45
RNU6-1140P-201ENST00000410517 VWA5B2Q8N398 1253 aa6.02□□□□□ -1.45
RNU6-1140P-201ENST00000410517 FAM174AQ8TBP5 190 aa6.02□□□□□ -1.45
RNU6-1140P-201ENST00000410517 ITGB2P05107 769 aa6.01□□□□□ -1.45
RNU6-1140P-201ENST00000410517 LYPD4Q6UWN0 246 aa6.01□□□□□ -1.45
RNU6-1140P-201ENST00000410517 CCDC155Q8N6L0 562 aa6.01□□□□□ -1.45
RNU6-1140P-201ENST00000410517 CDC14CA4D256 554 aa6□□□□□ -1.45
RNU6-1140P-201ENST00000410517 FIGNL2A6NMB9 653 aa6□□□□□ -1.45
RNU6-1140P-201ENST00000410517 PROCP04070 461 aa6□□□□□ -1.45
RNU6-1140P-201ENST00000410517 NR3C2P08235 984 aa6□□□□□ -1.45
RNU6-1140P-201ENST00000410517 MEIOBQ8N635 442 aa6□□□□□ -1.45
RNU6-1140P-201ENST00000410517 EVA1BQ9NVM1 165 aa6□□□□□ -1.45
RNU6-1140P-201ENST00000410517 TTLL8A6PVC2 850 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 PHF20L1A8MW92 1017 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 KCNH2Q12809 1159 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 SV2AQ7L0J3 742 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 CDK15Q96Q40 435 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 CNTNAP5Q8WYK1 1306 aa5.99□□□□□ -1.45
RNU6-1140P-201ENST00000410517 C6orf229H3BNL8 230 aa5.98□□□□□ -1.45
RNU6-1140P-201ENST00000410517 SPTLC1O15269 473 aa5.98□□□□□ -1.45
RNU6-1140P-201ENST00000410517 NR5A1Q13285 461 aa5.98□□□□□ -1.45
RNU6-1140P-201ENST00000410517 PTPRNQ16849 979 aa5.98□□□□□ -1.45
RNU6-1140P-201ENST00000410517 ENAMQ9NRM1 1142 aa5.98□□□□□ -1.45
RNU6-1140P-201ENST00000410517 GPR37O15354 613 aa5.97□□□□□ -1.45
RNU6-1140P-201ENST00000410517 TSEN34Q9BSV6 310 aaKnown RBP5.97□□□□□ -1.45
RNU6-1140P-201ENST00000410517 CELA2BP08218 269 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1140P-201ENST00000410517 ITGA6P23229 1130 aa5.96□□□□□ -1.46
RNU6-1140P-201ENST00000410517 HAP1P54257 671 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1140P-201ENST00000410517 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
RNU6-1140P-201ENST00000410517 BEND7Q8N7W2 519 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1140P-201ENST00000410517 GRM5P41594 1212 aa5.95□□□□□ -1.46
RNU6-1140P-201ENST00000410517 PODNQ7Z5L7 613 aa5.95□□□□□ -1.46
RNU6-1140P-201ENST00000410517 FOXJ1Q92949 421 aa5.95□□□□□ -1.46
RNU6-1140P-201ENST00000410517 SLC35F4A4IF30 521 aa5.94□□□□□ -1.46
RNU6-1140P-201ENST00000410517 FURINP09958 794 aa5.94□□□□□ -1.46
RNU6-1140P-201ENST00000410517 BAG6P46379 1132 aa5.94□□□□□ -1.46
RNU6-1140P-201ENST00000410517 SRSF11Q05519 484 aaKnown RBP5.94□□□□□ -1.46
RNU6-1140P-201ENST00000410517 SH3RF1Q7Z6J0 888 aa5.94□□□□□ -1.46
RNU6-1140P-201ENST00000410517 FDX1P10109 184 aa5.93□□□□□ -1.46
RNU6-1140P-201ENST00000410517 CTHP32929 405 aa5.93□□□□□ -1.46
RNU6-1140P-201ENST00000410517 MDM2Q00987 491 aaPredicted RBP5.93□□□□□ -1.46
RNU6-1140P-201ENST00000410517 NUTM1Q86Y26 1132 aa5.93□□□□□ -1.46
RNU6-1140P-201ENST00000410517 AGERQ15109 404 aa5.92□□□□□ -1.46
RNU6-1140P-201ENST00000410517 SMYD5Q6GMV2 418 aa5.92□□□□□ -1.46
RNU6-1140P-201ENST00000410517 PCDHGC3Q9UN70 934 aa5.92□□□□□ -1.46
RNU6-1140P-201ENST00000410517 NEDD1Q8NHV4 660 aa5.91□□□□□ -1.46
RNU6-1140P-201ENST00000410517 PRR7Q8TB68 274 aa5.91□□□□□ -1.46
RNU6-1140P-201ENST00000410517 VSIG10Q8N0Z9 540 aa5.9□□□□□ -1.46
RNU6-1140P-201ENST00000410517 FSHRP23945 695 aa5.89□□□□□ -1.47
RNU6-1140P-201ENST00000410517 TESPA1A2RU30 521 aaPredicted RBP5.88□□□□□ -1.47
RNU6-1140P-201ENST00000410517 GAS6Q14393 721 aa5.88□□□□□ -1.47
RNU6-1140P-201ENST00000410517 P3H3Q8IVL6 736 aa5.88□□□□□ -1.47
RNU6-1140P-201ENST00000410517 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
RNU6-1140P-201ENST00000410517 EMILIN1Q9Y6C2 1016 aa5.88□□□□□ -1.47
RNU6-1140P-201ENST00000410517 BTBD11A6QL63 1104 aa5.87□□□□□ -1.47
RNU6-1140P-201ENST00000410517 SPINT1O43278 529 aa5.87□□□□□ -1.47
RNU6-1140P-201ENST00000410517 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
RNU6-1140P-201ENST00000410517 KRBA1A5PL33 1030 aa5.86□□□□□ -1.47
RNU6-1140P-201ENST00000410517 CBLBQ13191 982 aa5.86□□□□□ -1.47
RNU6-1140P-201ENST00000410517 BPHLQ86WA6 291 aaPredicted RBP5.86□□□□□ -1.47
RNU6-1140P-201ENST00000410517 BCRP11274 1271 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms