RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PPP1R12CQ9BZL4 782 aa7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 F12P00748 615 aaPredicted RBP7.36□□□□□ -1.23
RNU2-28P-201ENST00000410457 JUNDP17535 347 aa7.36□□□□□ -1.23
RNU2-28P-201ENST00000410457 EIF4G2P78344 907 aaKnown RBP eCLIP7.36□□□□□ -1.23
RNU2-28P-201ENST00000410457 NR1H3Q13133 447 aa7.35□□□□□ -1.23
RNU2-28P-201ENST00000410457 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
RNU2-28P-201ENST00000410457 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
RNU2-28P-201ENST00000410457 FKBPLQ9UIM3 349 aa7.35□□□□□ -1.23
RNU2-28P-201ENST00000410457 PALM3A6NDB9 673 aaPredicted RBP7.34□□□□□ -1.23
RNU2-28P-201ENST00000410457 SRPK2P78362 688 aaKnown RBP7.34□□□□□ -1.23
RNU2-28P-201ENST00000410457 UCN2Q96RP3 112 aa7.34□□□□□ -1.23
RNU2-28P-201ENST00000410457 ZBBXA8MT70 800 aa7.33□□□□□ -1.24
RNU2-28P-201ENST00000410457 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.32□□□□□ -1.24
RNU2-28P-201ENST00000410457 DXOO77932 396 aaKnown RBP7.32□□□□□ -1.24
RNU2-28P-201ENST00000410457 FBXO45P0C2W1 286 aa7.32□□□□□ -1.24
RNU2-28P-201ENST00000410457 NYAP1Q6ZVC0 841 aa7.32□□□□□ -1.24
RNU2-28P-201ENST00000410457 WBP1LQ9NX94 342 aa7.32□□□□□ -1.24
RNU2-28P-201ENST00000410457 USTQ9Y2C2 406 aa7.32□□□□□ -1.24
RNU2-28P-201ENST00000410457 CCNYL3P0C7X3 344 aa7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 MMP16P51512 607 aa7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 ARMC2Q8NEN0 867 aa7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 GPKOWQ92917 476 aaPredicted RBP eCLIP7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 MAP10Q9P2G4 905 aa7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 GPSM3Q9Y4H4 160 aa7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 MAFBQ9Y5Q3 323 aaPredicted RBP7.31□□□□□ -1.24
RNU2-28P-201ENST00000410457 A0A0G2JS52 829 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 RFX1P22670 979 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 THSD4Q6ZMP0 1018 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 SPSB2Q99619 263 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 EVA1BQ9NVM1 165 aa7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 TFIP11Q9UBB9 837 aaKnown RBP7.3□□□□□ -1.24
RNU2-28P-201ENST00000410457 ATP9BO43861 1147 aa7.29□□□□□ -1.24
RNU2-28P-201ENST00000410457 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
RNU2-28P-201ENST00000410457 Q6ZNB5 142 aa7.29□□□□□ -1.24
RNU2-28P-201ENST00000410457 FAM160A2Q8N612 972 aaPredicted RBP7.29□□□□□ -1.24
RNU2-28P-201ENST00000410457 NUDT12Q9BQG2 462 aa7.29□□□□□ -1.24
RNU2-28P-201ENST00000410457 ATG7O95352 703 aa7.28□□□□□ -1.24
RNU2-28P-201ENST00000410457 CTHP32929 405 aa7.28□□□□□ -1.24
RNU2-28P-201ENST00000410457 KCNH2Q12809 1159 aa7.28□□□□□ -1.24
RNU2-28P-201ENST00000410457 NBPF14Q5TI25 921 aa7.28□□□□□ -1.24
RNU2-28P-201ENST00000410457 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
RNU2-28P-201ENST00000410457 PATL2C9JE40 543 aaKnown RBP7.27□□□□□ -1.25
RNU2-28P-201ENST00000410457 MCCD1P59942 119 aaPredicted RBP7.27□□□□□ -1.25
RNU2-28P-201ENST00000410457 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
RNU2-28P-201ENST00000410457 CCDC9Q9Y3X0 531 aaKnown RBP7.27□□□□□ -1.25
RNU2-28P-201ENST00000410457 ZPR1O75312 459 aa7.26□□□□□ -1.25
RNU2-28P-201ENST00000410457 ADH1BP00325 375 aa7.26□□□□□ -1.25
RNU2-28P-201ENST00000410457 COPS2P61201 443 aa7.26□□□□□ -1.25
RNU2-28P-201ENST00000410457 PTK2Q05397 1052 aa7.26□□□□□ -1.25
RNU2-28P-201ENST00000410457 AEBP1Q8IUX7 1158 aa7.26□□□□□ -1.25
RNU2-28P-201ENST00000410457 PRDM9Q9NQV7 894 aa7.25□□□□□ -1.25
RNU2-28P-201ENST00000410457 BRD1O95696 1058 aa7.24□□□□□ -1.25
RNU2-28P-201ENST00000410457 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
RNU2-28P-201ENST00000410457 KCNA1Q09470 495 aa7.23□□□□□ -1.25
RNU2-28P-201ENST00000410457 ELOAQ14241 798 aaKnown RBP7.23□□□□□ -1.25
RNU2-28P-201ENST00000410457 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
RNU2-28P-201ENST00000410457 MTRQ99707 1265 aa7.23□□□□□ -1.25
RNU2-28P-201ENST00000410457 OCSTAMPQ9BR26 566 aa7.23□□□□□ -1.25
RNU2-28P-201ENST00000410457 VRTNQ9H8Y1 702 aa7.23□□□□□ -1.25
RNU2-28P-201ENST00000410457 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 PIK3CDO00329 1044 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 TLL1O43897 1013 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 LAPTM4AQ15012 233 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 USP17L2Q6R6M4 530 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
RNU2-28P-201ENST00000410457 TMEM88BA6NKF7 163 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 USP17L5A8MUK1 530 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 LZTS3O60299 673 aaPredicted RBP7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 TJAP1Q5JTD0 557 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 SH3BP5LQ7L8J4 393 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 UNC93B1Q9H1C4 597 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 IL21Q9HBE4 155 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 CEP126Q9P2H0 1117 aa7.21□□□□□ -1.26
RNU2-28P-201ENST00000410457 SKIP12755 728 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 FAM174AQ8TBP5 190 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 ADAM32Q8TC27 787 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 ARHGAP9Q9BRR9 750 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 CHIC2Q9UKJ5 165 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 PCDHB9Q9Y5E1 797 aa7.2□□□□□ -1.26
RNU2-28P-201ENST00000410457 FAM196BA6NMK8 535 aa7.19□□□□□ -1.26
RNU2-28P-201ENST00000410457 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
RNU2-28P-201ENST00000410457 SH3RF1Q7Z6J0 888 aa7.19□□□□□ -1.26
RNU2-28P-201ENST00000410457 PHTF2Q8N3S3 785 aa7.19□□□□□ -1.26
RNU2-28P-201ENST00000410457 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
RNU2-28P-201ENST00000410457 B4GALNT3Q6L9W6 998 aa7.18□□□□□ -1.26
RNU2-28P-201ENST00000410457 ZBTB33Q86T24 672 aa7.18□□□□□ -1.26
RNU2-28P-201ENST00000410457 RNF135Q8IUD6 432 aa7.18□□□□□ -1.26
RNU2-28P-201ENST00000410457 ATP5J2-PTCD1G3V325 749 aa7.17□□□□□ -1.26
RNU2-28P-201ENST00000410457 PTCRAQ6ISU1 281 aaPredicted RBP7.17□□□□□ -1.26
RNU2-28P-201ENST00000410457 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
RNU2-28P-201ENST00000410457 PLPP7Q8NBV4 271 aa7.17□□□□□ -1.26
RNU2-28P-201ENST00000410457 ZMIZ1Q9ULJ6 1067 aa7.17□□□□□ -1.26
RNU2-28P-201ENST00000410457 NCOA4Q13772 614 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms