RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 NGDNQ8NEJ9 315 aaKnown RBP19.72■□□□□ 0.75
GYPC-203ENST00000409836 NWD2Q9ULI1 1742 aa19.7■□□□□ 0.74
GYPC-203ENST00000409836 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
GYPC-203ENST00000409836 SLIT3O75094 1523 aa19.69■□□□□ 0.74
GYPC-203ENST00000409836 TMF1P82094 1093 aa19.68■□□□□ 0.74
GYPC-203ENST00000409836 PLCH1Q4KWH8 1693 aa19.68■□□□□ 0.74
GYPC-203ENST00000409836 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.742e-8■■■■■ 45.9
GYPC-203ENST00000409836 USP19O94966 1318 aa19.67■□□□□ 0.74
GYPC-203ENST00000409836 ZNF692Q9BU19 519 aaPredicted RBP19.66■□□□□ 0.74
GYPC-203ENST00000409836 EDC4Q6P2E9 1401 aaKnown RBP19.66■□□□□ 0.74
GYPC-203ENST00000409836 CDCA8Q53HL2 280 aa19.65■□□□□ 0.74
GYPC-203ENST00000409836 A0A1W2PP64 1363 aa19.65■□□□□ 0.74
GYPC-203ENST00000409836 SLIT2O94813 1529 aa19.65■□□□□ 0.74
GYPC-203ENST00000409836 NRAPQ86VF7 1730 aa19.65■□□□□ 0.74
GYPC-203ENST00000409836 COL14A1Q05707 1796 aaKnown RBP19.65■□□□□ 0.74
GYPC-203ENST00000409836 RGS17Q9UGC6 210 aaPredicted RBP19.64■□□□□ 0.73
GYPC-203ENST00000409836 TTC21AQ8NDW8 1320 aa19.64■□□□□ 0.73
GYPC-203ENST00000409836 ANKRD36BQ8N2N9 1353 aa19.64■□□□□ 0.73
GYPC-203ENST00000409836 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
GYPC-203ENST00000409836 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
GYPC-203ENST00000409836 LMO7Q8WWI1 1683 aa19.62■□□□□ 0.73
GYPC-203ENST00000409836 ABCC6O95255 1503 aa19.61■□□□□ 0.73
GYPC-203ENST00000409836 USP31Q70CQ4 1352 aa19.6■□□□□ 0.73
GYPC-203ENST00000409836 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
GYPC-203ENST00000409836 NFAT5O94916 1531 aa19.6■□□□□ 0.73
GYPC-203ENST00000409836 CPDO75976 1380 aa19.59■□□□□ 0.73
GYPC-203ENST00000409836 TTC21BQ7Z4L5 1316 aa19.59■□□□□ 0.73
GYPC-203ENST00000409836 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
GYPC-203ENST00000409836 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
GYPC-203ENST00000409836 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
GYPC-203ENST00000409836 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
GYPC-203ENST00000409836 KIF20BQ96Q89 1820 aa19.59■□□□□ 0.73
GYPC-203ENST00000409836 BCL9LQ86UU0 1499 aa19.59■□□□□ 0.73
GYPC-203ENST00000409836 OVOS2A0A0J9YW53 1432 aa19.59■□□□□ 0.73
GYPC-203ENST00000409836 OVOS2Q6IE36 1432 aa19.59■□□□□ 0.73
GYPC-203ENST00000409836 SLC12A5Q9H2X9 1139 aa19.58■□□□□ 0.72
GYPC-203ENST00000409836 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.72
GYPC-203ENST00000409836 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.72
GYPC-203ENST00000409836 AFF2P51816 1311 aa19.57■□□□□ 0.72
GYPC-203ENST00000409836 MEX3CQ5U5Q3 659 aaKnown RBP19.57■□□□□ 0.72
GYPC-203ENST00000409836 ZNF772Q68DY9 489 aaPredicted RBP19.57■□□□□ 0.72
GYPC-203ENST00000409836 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
GYPC-203ENST00000409836 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
GYPC-203ENST00000409836 ATRNO75882 1429 aa19.56■□□□□ 0.72
GYPC-203ENST00000409836 COL18A1P39060 1754 aa19.55■□□□□ 0.72
GYPC-203ENST00000409836 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
GYPC-203ENST00000409836 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
GYPC-203ENST00000409836 NLRP13Q86W25 1043 aa19.54■□□□□ 0.72
GYPC-203ENST00000409836 CABLES1Q8TDN4 633 aa19.54■□□□□ 0.72
GYPC-203ENST00000409836 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
GYPC-203ENST00000409836 C8orf37Q96NL8 207 aa19.53■□□□□ 0.72
GYPC-203ENST00000409836 ANKRD26Q9UPS8 1709 aa19.53■□□□□ 0.72
GYPC-203ENST00000409836 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
GYPC-203ENST00000409836 POTEAQ6S8J7 498 aa19.51■□□□□ 0.71
GYPC-203ENST00000409836 LTN1O94822 1766 aa19.5■□□□□ 0.71
GYPC-203ENST00000409836 GLI3P10071 1580 aa19.5■□□□□ 0.71
GYPC-203ENST00000409836 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
GYPC-203ENST00000409836 NGLY1Q96IV0 654 aa19.5■□□□□ 0.71
GYPC-203ENST00000409836 GCP02774 474 aa19.48■□□□□ 0.71
GYPC-203ENST00000409836 NLRP6P59044 892 aa19.48■□□□□ 0.71
GYPC-203ENST00000409836 CAMTA1Q9Y6Y1 1673 aa19.47■□□□□ 0.71
GYPC-203ENST00000409836 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
GYPC-203ENST00000409836 USP21Q9UK80 565 aa19.47■□□□□ 0.71
GYPC-203ENST00000409836 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
GYPC-203ENST00000409836 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
GYPC-203ENST00000409836 FAM83GA6ND36 823 aa19.46■□□□□ 0.71
GYPC-203ENST00000409836 C11orf95C9JLR9 678 aaPredicted RBP19.46■□□□□ 0.71
GYPC-203ENST00000409836 ILDR2Q71H61 639 aa19.46■□□□□ 0.71
GYPC-203ENST00000409836 UNC5CLQ8IV45 518 aa19.46■□□□□ 0.71
GYPC-203ENST00000409836 KIF7Q2M1P5 1343 aa19.46■□□□□ 0.71
GYPC-203ENST00000409836 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
GYPC-203ENST00000409836 NME9Q86XW9 330 aa19.45■□□□□ 0.7
GYPC-203ENST00000409836 KCNH5Q8NCM2 988 aa19.45■□□□□ 0.7
GYPC-203ENST00000409836 COL5A2P05997 1499 aaPredicted RBP19.45■□□□□ 0.7
GYPC-203ENST00000409836 PRDM11Q9NQV5 511 aa19.44■□□□□ 0.7
GYPC-203ENST00000409836 TRPC5Q9UL62 973 aaPredicted RBP19.44■□□□□ 0.7
GYPC-203ENST00000409836 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
GYPC-203ENST00000409836 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
GYPC-203ENST00000409836 WNK3Q9BYP7 1800 aa19.43■□□□□ 0.7
GYPC-203ENST00000409836 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
GYPC-203ENST00000409836 FAM208AQ9UK61 1670 aaKnown RBP19.43■□□□□ 0.7
GYPC-203ENST00000409836 RGS12O14924 1447 aa19.42■□□□□ 0.7
GYPC-203ENST00000409836 RGPD5Q99666 1765 aa19.42■□□□□ 0.7
GYPC-203ENST00000409836 VPS72Q15906 364 aa19.42■□□□□ 0.7
GYPC-203ENST00000409836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.42■□□□□ 0.7
GYPC-203ENST00000409836 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
GYPC-203ENST00000409836 ARHGEF25Q86VW2 580 aa19.41■□□□□ 0.7
GYPC-203ENST00000409836 NSD2O96028 1365 aa19.4■□□□□ 0.7
GYPC-203ENST00000409836 FYB1O15117 783 aa19.39■□□□□ 0.69
GYPC-203ENST00000409836 QTRT2Q9H974 415 aaKnown RBP19.39■□□□□ 0.69
GYPC-203ENST00000409836 ZRANB1Q9UGI0 708 aa19.39■□□□□ 0.69
GYPC-203ENST00000409836 RXRBP28702 533 aa19.38■□□□□ 0.69
GYPC-203ENST00000409836 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
GYPC-203ENST00000409836 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
GYPC-203ENST00000409836 BTG4Q9NY30 223 aa19.38■□□□□ 0.69
GYPC-203ENST00000409836 BLMP54132 1417 aaPredicted RBP19.37■□□□□ 0.69
GYPC-203ENST00000409836 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
GYPC-203ENST00000409836 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
GYPC-203ENST00000409836 GJD4Q96KN9 370 aaPredicted RBP19.37■□□□□ 0.69
GYPC-203ENST00000409836 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms