RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
PMS1-204ENST00000409823 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
PMS1-204ENST00000409823 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
PMS1-204ENST00000409823 EDC4Q6P2E9 1401 aaKnown RBP17.12■□□□□ 0.33
PMS1-204ENST00000409823 FBLN1P23142 703 aa17.12■□□□□ 0.33
PMS1-204ENST00000409823 SOX12O15370 315 aa17.11■□□□□ 0.33
PMS1-204ENST00000409823 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
PMS1-204ENST00000409823 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
PMS1-204ENST00000409823 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
PMS1-204ENST00000409823 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
PMS1-204ENST00000409823 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
PMS1-204ENST00000409823 CERKQ8TCT0 537 aa17.09■□□□□ 0.33
PMS1-204ENST00000409823 AKAP12Q02952 1782 aa17.09■□□□□ 0.33
PMS1-204ENST00000409823 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.32
PMS1-204ENST00000409823 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.32
PMS1-204ENST00000409823 RALBP1Q15311 655 aa17.08■□□□□ 0.32
PMS1-204ENST00000409823 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
PMS1-204ENST00000409823 NPHP3Q7Z494 1330 aa17.07■□□□□ 0.32
PMS1-204ENST00000409823 NLRP6P59044 892 aa17.07■□□□□ 0.32
PMS1-204ENST00000409823 TOM1O60784 492 aa17.06■□□□□ 0.32
PMS1-204ENST00000409823 COG3Q96JB2 828 aa17.06■□□□□ 0.32
PMS1-204ENST00000409823 NPC1L1Q9UHC9 1359 aa17.05■□□□□ 0.32
PMS1-204ENST00000409823 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
PMS1-204ENST00000409823 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
PMS1-204ENST00000409823 NRKQ7Z2Y5 1582 aa17.04■□□□□ 0.32
PMS1-204ENST00000409823 TTC21AQ8NDW8 1320 aa17.03■□□□□ 0.32
PMS1-204ENST00000409823 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
PMS1-204ENST00000409823 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
PMS1-204ENST00000409823 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
PMS1-204ENST00000409823 NSD2O96028 1365 aa17.02■□□□□ 0.32
PMS1-204ENST00000409823 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.31
PMS1-204ENST00000409823 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
PMS1-204ENST00000409823 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
PMS1-204ENST00000409823 PIK3C2AO00443 1686 aa17■□□□□ 0.31
PMS1-204ENST00000409823 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
PMS1-204ENST00000409823 PXDNQ92626 1479 aa17■□□□□ 0.31
PMS1-204ENST00000409823 MTHFSP49914 203 aa17■□□□□ 0.31
PMS1-204ENST00000409823 NLRP13Q86W25 1043 aa17■□□□□ 0.31
PMS1-204ENST00000409823 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
PMS1-204ENST00000409823 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
PMS1-204ENST00000409823 OVOS2A0A0J9YW53 1432 aa16.98■□□□□ 0.31
PMS1-204ENST00000409823 OVOS2Q6IE36 1432 aa16.98■□□□□ 0.31
PMS1-204ENST00000409823 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
PMS1-204ENST00000409823 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
PMS1-204ENST00000409823 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
PMS1-204ENST00000409823 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
PMS1-204ENST00000409823 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
PMS1-204ENST00000409823 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.3
PMS1-204ENST00000409823 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
PMS1-204ENST00000409823 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
PMS1-204ENST00000409823 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
PMS1-204ENST00000409823 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
PMS1-204ENST00000409823 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
PMS1-204ENST00000409823 GCP02774 474 aa16.94■□□□□ 0.3
PMS1-204ENST00000409823 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
PMS1-204ENST00000409823 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
PMS1-204ENST00000409823 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
PMS1-204ENST00000409823 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
PMS1-204ENST00000409823 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
PMS1-204ENST00000409823 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
PMS1-204ENST00000409823 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
PMS1-204ENST00000409823 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
PMS1-204ENST00000409823 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
PMS1-204ENST00000409823 ARHGEF10O15013 1369 aa16.9■□□□□ 0.3
PMS1-204ENST00000409823 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
PMS1-204ENST00000409823 AMPHP49418 695 aa16.89■□□□□ 0.3
PMS1-204ENST00000409823 HSP90AB2PQ58FF8 381 aa16.89■□□□□ 0.3
PMS1-204ENST00000409823 PNISRQ8TF01 805 aaKnown RBP16.89■□□□□ 0.29
PMS1-204ENST00000409823 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.29
PMS1-204ENST00000409823 KCNH5Q8NCM2 988 aa16.89■□□□□ 0.29
PMS1-204ENST00000409823 USP19O94966 1318 aa16.88■□□□□ 0.29
PMS1-204ENST00000409823 MED1Q15648 1581 aaPredicted RBP16.88■□□□□ 0.29
PMS1-204ENST00000409823 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
PMS1-204ENST00000409823 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
PMS1-204ENST00000409823 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
PMS1-204ENST00000409823 AHDC1Q5TGY3 1603 aaPredicted RBP16.87■□□□□ 0.29
PMS1-204ENST00000409823 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
PMS1-204ENST00000409823 PHLPP1O60346 1717 aa16.86■□□□□ 0.29
PMS1-204ENST00000409823 HSPA1LP34931 641 aa16.86■□□□□ 0.29
PMS1-204ENST00000409823 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
PMS1-204ENST00000409823 WDR43Q15061 677 aaKnown RBP eCLIP16.85■□□□□ 0.29
PMS1-204ENST00000409823 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
PMS1-204ENST00000409823 NFAT5O94916 1531 aa16.84■□□□□ 0.29
PMS1-204ENST00000409823 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
PMS1-204ENST00000409823 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
PMS1-204ENST00000409823 ARHGEF25Q86VW2 580 aa16.84■□□□□ 0.29
PMS1-204ENST00000409823 NUTM2AQ8IVF1 878 aaPredicted RBP16.84■□□□□ 0.29
PMS1-204ENST00000409823 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
PMS1-204ENST00000409823 HOXC9P31274 260 aa16.84■□□□□ 0.29
PMS1-204ENST00000409823 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
PMS1-204ENST00000409823 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.29
PMS1-204ENST00000409823 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.29
PMS1-204ENST00000409823 KIAA0232Q92628 1395 aa16.83■□□□□ 0.29
PMS1-204ENST00000409823 SLIT3O75094 1523 aa16.83■□□□□ 0.28
PMS1-204ENST00000409823 PEAK1Q9H792 1746 aa16.83■□□□□ 0.28
PMS1-204ENST00000409823 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
PMS1-204ENST00000409823 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
PMS1-204ENST00000409823 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
PMS1-204ENST00000409823 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
PMS1-204ENST00000409823 FLT4P35916 1363 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms