RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 RBM6P78332 1123 aaKnown RBP24.12■■□□□ 1.45
PDE6D-202ENST00000409772 CABLES1Q8TDN4 633 aa24.12■■□□□ 1.45
PDE6D-202ENST00000409772 TRPC5Q9UL62 973 aaPredicted RBP24.12■■□□□ 1.45
PDE6D-202ENST00000409772 ATAD2Q6PL18 1390 aa24.12■■□□□ 1.45
PDE6D-202ENST00000409772 PUS7Q96PZ0 661 aaKnown RBP24.11■■□□□ 1.45
PDE6D-202ENST00000409772 TOPAZ1Q8N9V7 1692 aa24.1■■□□□ 1.45
PDE6D-202ENST00000409772 TRPM3Q9HCF6 1732 aaPredicted RBP24.1■■□□□ 1.45
PDE6D-202ENST00000409772 ABTB2Q8N961 1025 aa24.09■■□□□ 1.45
PDE6D-202ENST00000409772 PLEKHG5O94827 1062 aa24.08■■□□□ 1.45
PDE6D-202ENST00000409772 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
PDE6D-202ENST00000409772 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
PDE6D-202ENST00000409772 NLRP13Q86W25 1043 aa24.06■■□□□ 1.44
PDE6D-202ENST00000409772 UNC5CLQ8IV45 518 aa24.06■■□□□ 1.44
PDE6D-202ENST00000409772 ALS2Q96Q42 1657 aa24.05■■□□□ 1.44
PDE6D-202ENST00000409772 CDK12Q9NYV4 1490 aaPredicted RBP24.04■■□□□ 1.44
PDE6D-202ENST00000409772 BCL9LQ86UU0 1499 aa24.01■■□□□ 1.43
PDE6D-202ENST00000409772 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
PDE6D-202ENST00000409772 TESK2Q96S53 571 aa24.01■■□□□ 1.43
PDE6D-202ENST00000409772 USP6P35125 1406 aa24.01■■□□□ 1.43
PDE6D-202ENST00000409772 SLIT2O94813 1529 aa24■■□□□ 1.43
PDE6D-202ENST00000409772 CDCA8Q53HL2 280 aa24■■□□□ 1.43
PDE6D-202ENST00000409772 NUTM2GQ5VZR2 741 aa24■■□□□ 1.43
PDE6D-202ENST00000409772 TMC1Q8TDI8 760 aa24■■□□□ 1.43
PDE6D-202ENST00000409772 USP47Q96K76 1375 aa24■■□□□ 1.43
PDE6D-202ENST00000409772 TMF1P82094 1093 aa23.99■■□□□ 1.43
PDE6D-202ENST00000409772 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
PDE6D-202ENST00000409772 GJD4Q96KN9 370 aaPredicted RBP23.99■■□□□ 1.43
PDE6D-202ENST00000409772 TERF2IPQ9NYB0 399 aa23.99■■□□□ 1.43
PDE6D-202ENST00000409772 ATRNO75882 1429 aa23.99■■□□□ 1.43
PDE6D-202ENST00000409772 PRDM11Q9NQV5 511 aa23.98■■□□□ 1.43
PDE6D-202ENST00000409772 NLRP6P59044 892 aa23.97■■□□□ 1.43
PDE6D-202ENST00000409772 TTC21AQ8NDW8 1320 aa23.97■■□□□ 1.43
PDE6D-202ENST00000409772 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
PDE6D-202ENST00000409772 VPS72Q15906 364 aa23.96■■□□□ 1.43
PDE6D-202ENST00000409772 CPSF1Q10570 1443 aaKnown RBP23.95■■□□□ 1.42
PDE6D-202ENST00000409772 NINLQ9Y2I6 1382 aa23.95■■□□□ 1.42
PDE6D-202ENST00000409772 TTC21BQ7Z4L5 1316 aa23.95■■□□□ 1.42
PDE6D-202ENST00000409772 BTG4Q9NY30 223 aa23.95■■□□□ 1.42
PDE6D-202ENST00000409772 ABCA3Q99758 1704 aa23.94■■□□□ 1.42
PDE6D-202ENST00000409772 GCP02774 474 aa23.94■■□□□ 1.42
PDE6D-202ENST00000409772 SSH2Q76I76 1423 aa23.93■■□□□ 1.42
PDE6D-202ENST00000409772 USP19O94966 1318 aa23.93■■□□□ 1.42
PDE6D-202ENST00000409772 ZC3H6P61129 1189 aaKnown RBP23.93■■□□□ 1.42
PDE6D-202ENST00000409772 SLC12A5Q9H2X9 1139 aa23.93■■□□□ 1.42
PDE6D-202ENST00000409772 CCDC9Q9Y3X0 531 aaKnown RBP23.93■■□□□ 1.42
PDE6D-202ENST00000409772 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
PDE6D-202ENST00000409772 NWD2Q9ULI1 1742 aa23.93■■□□□ 1.42
PDE6D-202ENST00000409772 KCNH5Q8NCM2 988 aa23.91■■□□□ 1.42
PDE6D-202ENST00000409772 COL14A1Q05707 1796 aaKnown RBP23.91■■□□□ 1.42
PDE6D-202ENST00000409772 KIAA0232Q92628 1395 aa23.91■■□□□ 1.42
PDE6D-202ENST00000409772 CPDO75976 1380 aa23.89■■□□□ 1.41
PDE6D-202ENST00000409772 CRYBG1Q9Y4K1 1723 aa23.88■■□□□ 1.41
PDE6D-202ENST00000409772 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
PDE6D-202ENST00000409772 EVA1CP58658 441 aa23.87■■□□□ 1.41
PDE6D-202ENST00000409772 AKAP12Q02952 1782 aa23.87■■□□□ 1.41
PDE6D-202ENST00000409772 RGS12O14924 1447 aa23.86■■□□□ 1.41
PDE6D-202ENST00000409772 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
PDE6D-202ENST00000409772 ONECUT3O60422 494 aaPredicted RBP23.85■■□□□ 1.41
PDE6D-202ENST00000409772 CHRNA2Q15822 529 aa23.85■■□□□ 1.41
PDE6D-202ENST00000409772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
PDE6D-202ENST00000409772 PHRF1Q9P1Y6 1649 aaKnown RBP23.84■■□□□ 1.41
PDE6D-202ENST00000409772 EDC4Q6P2E9 1401 aaKnown RBP23.84■■□□□ 1.41
PDE6D-202ENST00000409772 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
PDE6D-202ENST00000409772 A0A1W2PP64 1363 aa23.81■■□□□ 1.4
PDE6D-202ENST00000409772 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
PDE6D-202ENST00000409772 UPF1Q92900 1129 aaKnown RBP eCLIP23.8■■□□□ 1.4
PDE6D-202ENST00000409772 STRN4Q9NRL3 753 aa23.8■■□□□ 1.4
PDE6D-202ENST00000409772 SPATA31A5Q5VU36 1347 aa23.8■■□□□ 1.4
PDE6D-202ENST00000409772 SPATA31A7Q8IWB4 1347 aa23.8■■□□□ 1.4
PDE6D-202ENST00000409772 MON2Q7Z3U7 1717 aa23.79■■□□□ 1.4
PDE6D-202ENST00000409772 NRKQ7Z2Y5 1582 aa23.79■■□□□ 1.4
PDE6D-202ENST00000409772 SEPT12Q8IYM1 358 aa23.79■■□□□ 1.4
PDE6D-202ENST00000409772 SLIT3O75094 1523 aa23.79■■□□□ 1.4
PDE6D-202ENST00000409772 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
PDE6D-202ENST00000409772 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
PDE6D-202ENST00000409772 ZBTB7CA1YPR0 619 aa23.78■■□□□ 1.4
PDE6D-202ENST00000409772 PIK3C2AO00443 1686 aa23.78■■□□□ 1.4
PDE6D-202ENST00000409772 GLI3P10071 1580 aa23.78■■□□□ 1.4
PDE6D-202ENST00000409772 ARHGEF25Q86VW2 580 aa23.77■■□□□ 1.4
PDE6D-202ENST00000409772 A0A0G2JS52 829 aa23.76■■□□□ 1.39
PDE6D-202ENST00000409772 MYT1Q01538 1121 aa23.76■■□□□ 1.39
PDE6D-202ENST00000409772 FAM98CQ17RN3 349 aaKnown RBP23.76■■□□□ 1.39
PDE6D-202ENST00000409772 NME9Q86XW9 330 aa23.76■■□□□ 1.39
PDE6D-202ENST00000409772 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
PDE6D-202ENST00000409772 HSPA5P11021 654 aaKnown RBP23.75■■□□□ 1.39
PDE6D-202ENST00000409772 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
PDE6D-202ENST00000409772 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
PDE6D-202ENST00000409772 COG3Q96JB2 828 aa23.74■■□□□ 1.39
PDE6D-202ENST00000409772 THRAP3Q9Y2W1 955 aaKnown RBP23.74■■□□□ 1.39
PDE6D-202ENST00000409772 SOX12O15370 315 aa23.73■■□□□ 1.39
PDE6D-202ENST00000409772 KRT27Q7Z3Y8 459 aa23.72■■□□□ 1.39
PDE6D-202ENST00000409772 CAMTA1Q9Y6Y1 1673 aa23.72■■□□□ 1.39
PDE6D-202ENST00000409772 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
PDE6D-202ENST00000409772 BARGINQ6ZT62 677 aa23.71■■□□□ 1.39
PDE6D-202ENST00000409772 ZRANB1Q9UGI0 708 aa23.71■■□□□ 1.39
PDE6D-202ENST00000409772 TCP11L2Q8N4U5 519 aa23.7■■□□□ 1.38
PDE6D-202ENST00000409772 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
PDE6D-202ENST00000409772 LMO7Q8WWI1 1683 aa23.68■■□□□ 1.38
PDE6D-202ENST00000409772 TOM1L2Q6ZVM7 507 aa23.67■■□□□ 1.38
PDE6D-202ENST00000409772 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms