RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 AFF2P51816 1311 aa26.78■■□□□ 1.88
PPM1B-207ENST00000409486 POLR3GLQ9BT43 218 aa26.78■■□□□ 1.88
PPM1B-207ENST00000409486 ABCA3Q99758 1704 aa26.76■■□□□ 1.88
PPM1B-207ENST00000409486 TMF1P82094 1093 aa26.75■■□□□ 1.87
PPM1B-207ENST00000409486 POTEAQ6S8J7 498 aa26.74■■□□□ 1.87
PPM1B-207ENST00000409486 ABTB2Q8N961 1025 aa26.74■■□□□ 1.87
PPM1B-207ENST00000409486 MARF1Q9Y4F3 1742 aaKnown RBP26.74■■□□□ 1.87
PPM1B-207ENST00000409486 AKAP12Q02952 1782 aa26.74■■□□□ 1.87
PPM1B-207ENST00000409486 HSPA5P11021 654 aaKnown RBP26.74■■□□□ 1.87
PPM1B-207ENST00000409486 SLC12A5Q9H2X9 1139 aa26.74■■□□□ 1.87
PPM1B-207ENST00000409486 USP6P35125 1406 aa26.72■■□□□ 1.87
PPM1B-207ENST00000409486 EIF4G2P78344 907 aaKnown RBP eCLIP26.72■■□□□ 1.87
PPM1B-207ENST00000409486 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
PPM1B-207ENST00000409486 ZNF772Q68DY9 489 aaPredicted RBP26.69■■□□□ 1.86
PPM1B-207ENST00000409486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.69■■□□□ 1.86
PPM1B-207ENST00000409486 ZBTB7CA1YPR0 619 aa26.68■■□□□ 1.86
PPM1B-207ENST00000409486 HDGFL2Q7Z4V5 671 aaPredicted RBP26.68■■□□□ 1.86
PPM1B-207ENST00000409486 USP21Q9UK80 565 aa26.68■■□□□ 1.86
PPM1B-207ENST00000409486 PHRF1Q9P1Y6 1649 aaKnown RBP26.66■■□□□ 1.86
PPM1B-207ENST00000409486 SOX12O15370 315 aa26.66■■□□□ 1.86
PPM1B-207ENST00000409486 MON2Q7Z3U7 1717 aa26.65■■□□□ 1.86
PPM1B-207ENST00000409486 CRYBG1Q9Y4K1 1723 aa26.65■■□□□ 1.86
PPM1B-207ENST00000409486 SLC24A1O60721 1099 aa26.64■■□□□ 1.86
PPM1B-207ENST00000409486 NLRP6P59044 892 aa26.64■■□□□ 1.86
PPM1B-207ENST00000409486 ZC3H6P61129 1189 aaKnown RBP26.64■■□□□ 1.86
PPM1B-207ENST00000409486 ZNF692Q9BU19 519 aaPredicted RBP26.64■■□□□ 1.86
PPM1B-207ENST00000409486 TTC21BQ7Z4L5 1316 aa26.63■■□□□ 1.85
PPM1B-207ENST00000409486 TERF2IPQ9NYB0 399 aa26.63■■□□□ 1.85
PPM1B-207ENST00000409486 CD163L1Q9NR16 1453 aa26.63■■□□□ 1.85
PPM1B-207ENST00000409486 PIK3C2AO00443 1686 aa26.63■■□□□ 1.85
PPM1B-207ENST00000409486 A0A1W2PP64 1363 aa26.63■■□□□ 1.85
PPM1B-207ENST00000409486 QTRT2Q9H974 415 aaKnown RBP26.62■■□□□ 1.85
PPM1B-207ENST00000409486 PLCH1Q4KWH8 1693 aa26.62■■□□□ 1.85
PPM1B-207ENST00000409486 CPSF1Q10570 1443 aaKnown RBP26.62■■□□□ 1.85
PPM1B-207ENST00000409486 NRKQ7Z2Y5 1582 aa26.62■■□□□ 1.85
PPM1B-207ENST00000409486 NLRP13Q86W25 1043 aa26.62■■□□□ 1.85
PPM1B-207ENST00000409486 CHRNA2Q15822 529 aa26.61■■□□□ 1.85
PPM1B-207ENST00000409486 CDCA8Q53HL2 280 aa26.61■■□□□ 1.85
PPM1B-207ENST00000409486 PRDM11Q9NQV5 511 aa26.6■■□□□ 1.85
PPM1B-207ENST00000409486 ZRANB1Q9UGI0 708 aa26.6■■□□□ 1.85
PPM1B-207ENST00000409486 FAM83GA6ND36 823 aa26.59■■□□□ 1.85
PPM1B-207ENST00000409486 NME9Q86XW9 330 aa26.58■■□□□ 1.85
PPM1B-207ENST00000409486 PUS7Q96PZ0 661 aaKnown RBP26.58■■□□□ 1.85
PPM1B-207ENST00000409486 CCDC9Q9Y3X0 531 aaKnown RBP26.58■■□□□ 1.85
PPM1B-207ENST00000409486 KIAA0232Q92628 1395 aa26.58■■□□□ 1.85
PPM1B-207ENST00000409486 SSH2Q76I76 1423 aa26.57■■□□□ 1.84
PPM1B-207ENST00000409486 RXRBP28702 533 aa26.57■■□□□ 1.84
PPM1B-207ENST00000409486 FNBP4Q8N3X1 1017 aaPredicted RBP26.56■■□□□ 1.84
PPM1B-207ENST00000409486 BRD4O60885 1362 aaPredicted RBP26.56■■□□□ 1.84
PPM1B-207ENST00000409486 TTC21AQ8NDW8 1320 aa26.55■■□□□ 1.84
PPM1B-207ENST00000409486 MYOM1P52179 1685 aa26.55■■□□□ 1.84
PPM1B-207ENST00000409486 NINLQ9Y2I6 1382 aa26.55■■□□□ 1.84
PPM1B-207ENST00000409486 BTG4Q9NY30 223 aa26.55■■□□□ 1.84
PPM1B-207ENST00000409486 BCL9LQ86UU0 1499 aa26.54■■□□□ 1.84
PPM1B-207ENST00000409486 COL14A1Q05707 1796 aaKnown RBP26.54■■□□□ 1.84
PPM1B-207ENST00000409486 TRPC5Q9UL62 973 aaPredicted RBP26.54■■□□□ 1.84
PPM1B-207ENST00000409486 GCP02774 474 aa26.53■■□□□ 1.84
PPM1B-207ENST00000409486 UNC5CLQ8IV45 518 aa26.53■■□□□ 1.84
PPM1B-207ENST00000409486 EDC4Q6P2E9 1401 aaKnown RBP26.53■■□□□ 1.84
PPM1B-207ENST00000409486 USP19O94966 1318 aa26.53■■□□□ 1.84
PPM1B-207ENST00000409486 SLIT2O94813 1529 aa26.52■■□□□ 1.84
PPM1B-207ENST00000409486 ANKRD36BQ8N2N9 1353 aa26.52■■□□□ 1.84
PPM1B-207ENST00000409486 STRN4Q9NRL3 753 aa26.51■■□□□ 1.83
PPM1B-207ENST00000409486 NWD2Q9ULI1 1742 aa26.5■■□□□ 1.83
PPM1B-207ENST00000409486 ATRNO75882 1429 aa26.49■■□□□ 1.83
PPM1B-207ENST00000409486 C11orf95C9JLR9 678 aaPredicted RBP26.49■■□□□ 1.83
PPM1B-207ENST00000409486 RBM6P78332 1123 aaKnown RBP26.49■■□□□ 1.83
PPM1B-207ENST00000409486 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.48■■□□□ 1.83
PPM1B-207ENST00000409486 SLIT3O75094 1523 aa26.47■■□□□ 1.83
PPM1B-207ENST00000409486 NRAPQ86VF7 1730 aa26.46■■□□□ 1.83
PPM1B-207ENST00000409486 A0A0G2JS52 829 aa26.44■■□□□ 1.82
PPM1B-207ENST00000409486 EVA1CP58658 441 aa26.44■■□□□ 1.82
PPM1B-207ENST00000409486 MYT1Q01538 1121 aa26.44■■□□□ 1.82
PPM1B-207ENST00000409486 NSD3Q9BZ95 1437 aa26.44■■□□□ 1.82
PPM1B-207ENST00000409486 GJD4Q96KN9 370 aaPredicted RBP26.43■■□□□ 1.82
PPM1B-207ENST00000409486 GGNBP2Q9H3C7 697 aa26.42■■□□□ 1.82
PPM1B-207ENST00000409486 KIF20BQ96Q89 1820 aa26.42■■□□□ 1.82
PPM1B-207ENST00000409486 RGS12O14924 1447 aa26.42■■□□□ 1.82
PPM1B-207ENST00000409486 KCNH5Q8NCM2 988 aa26.42■■□□□ 1.82
PPM1B-207ENST00000409486 COG3Q96JB2 828 aa26.41■■□□□ 1.82
PPM1B-207ENST00000409486 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
PPM1B-207ENST00000409486 GLI3P10071 1580 aa26.4■■□□□ 1.82
PPM1B-207ENST00000409486 VPS72Q15906 364 aa26.4■■□□□ 1.82
PPM1B-207ENST00000409486 CARD14Q9BXL6 1004 aa26.4■■□□□ 1.82
PPM1B-207ENST00000409486 CPDO75976 1380 aa26.39■■□□□ 1.82
PPM1B-207ENST00000409486 CAMTA1Q9Y6Y1 1673 aa26.39■■□□□ 1.81
PPM1B-207ENST00000409486 KIF7Q2M1P5 1343 aa26.38■■□□□ 1.81
PPM1B-207ENST00000409486 RGPD5Q99666 1765 aa26.38■■□□□ 1.81
PPM1B-207ENST00000409486 SOCS7O14512 581 aa26.38■■□□□ 1.81
PPM1B-207ENST00000409486 USP31Q70CQ4 1352 aa26.38■■□□□ 1.81
PPM1B-207ENST00000409486 NFAT5O94916 1531 aa26.38■■□□□ 1.81
PPM1B-207ENST00000409486 LTN1O94822 1766 aa26.38■■□□□ 1.81
PPM1B-207ENST00000409486 FBLN1P23142 703 aa26.37■■□□□ 1.81
PPM1B-207ENST00000409486 OVOS2A0A0J9YW53 1432 aa26.37■■□□□ 1.81
PPM1B-207ENST00000409486 OVOS2Q6IE36 1432 aa26.37■■□□□ 1.81
PPM1B-207ENST00000409486 LMO7Q8WWI1 1683 aa26.37■■□□□ 1.81
PPM1B-207ENST00000409486 PANK3Q9H999 370 aa26.36■■□□□ 1.81
PPM1B-207ENST00000409486 USP54Q70EL1 1684 aa26.36■■□□□ 1.81
PPM1B-207ENST00000409486 FYB1O15117 783 aa26.35■■□□□ 1.81
PPM1B-207ENST00000409486 FAM98CQ17RN3 349 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms