RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
POLR1A-202ENST00000409024 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
POLR1A-202ENST00000409024 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
POLR1A-202ENST00000409024 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
POLR1A-202ENST00000409024 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
POLR1A-202ENST00000409024 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
POLR1A-202ENST00000409024 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
POLR1A-202ENST00000409024 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
POLR1A-202ENST00000409024 RGS12O14924 1447 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
POLR1A-202ENST00000409024 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
POLR1A-202ENST00000409024 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
POLR1A-202ENST00000409024 ATF3P18847 181 aa13.14□□□□□ -0.31
POLR1A-202ENST00000409024 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
POLR1A-202ENST00000409024 SHPRHQ149N8 1683 aa13.14□□□□□ -0.31
POLR1A-202ENST00000409024 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
POLR1A-202ENST00000409024 C19orf44Q9H6X5 657 aa13.13□□□□□ -0.31
POLR1A-202ENST00000409024 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
POLR1A-202ENST00000409024 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
POLR1A-202ENST00000409024 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
POLR1A-202ENST00000409024 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
POLR1A-202ENST00000409024 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
POLR1A-202ENST00000409024 ITSN1Q15811 1721 aa13.11□□□□□ -0.31
POLR1A-202ENST00000409024 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
POLR1A-202ENST00000409024 FYB1O15117 783 aa13.11□□□□□ -0.31
POLR1A-202ENST00000409024 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
POLR1A-202ENST00000409024 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
POLR1A-202ENST00000409024 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
POLR1A-202ENST00000409024 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
POLR1A-202ENST00000409024 AKAP12Q02952 1782 aa13.09□□□□□ -0.31
POLR1A-202ENST00000409024 MON2Q7Z3U7 1717 aa13.09□□□□□ -0.31
POLR1A-202ENST00000409024 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
POLR1A-202ENST00000409024 LRRC59Q96AG4 307 aaKnown RBP13.09□□□□□ -0.31
POLR1A-202ENST00000409024 CFAP53Q96M91 514 aa13.09□□□□□ -0.31
POLR1A-202ENST00000409024 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
POLR1A-202ENST00000409024 TTC21AQ8NDW8 1320 aa13.08□□□□□ -0.32
POLR1A-202ENST00000409024 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
POLR1A-202ENST00000409024 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
POLR1A-202ENST00000409024 KIF20BQ96Q89 1820 aa13.07□□□□□ -0.32
POLR1A-202ENST00000409024 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
POLR1A-202ENST00000409024 ACEP12821 1306 aa13.06□□□□□ -0.32
POLR1A-202ENST00000409024 USP6P35125 1406 aa13.05□□□□□ -0.32
POLR1A-202ENST00000409024 DCCP43146 1447 aa13.05□□□□□ -0.32
POLR1A-202ENST00000409024 SSH2Q76I76 1423 aa13.05□□□□□ -0.32
POLR1A-202ENST00000409024 MTHFSP49914 203 aa13.04□□□□□ -0.32
POLR1A-202ENST00000409024 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
POLR1A-202ENST00000409024 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
POLR1A-202ENST00000409024 GGNBP2Q9H3C7 697 aa13.04□□□□□ -0.32
POLR1A-202ENST00000409024 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
POLR1A-202ENST00000409024 NALCNQ8IZF0 1738 aa13.04□□□□□ -0.32
POLR1A-202ENST00000409024 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
POLR1A-202ENST00000409024 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
POLR1A-202ENST00000409024 COG3Q96JB2 828 aa13.03□□□□□ -0.32
POLR1A-202ENST00000409024 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
POLR1A-202ENST00000409024 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
POLR1A-202ENST00000409024 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
POLR1A-202ENST00000409024 EP400Q96L91 3159 aa13.02□□□□□ -0.32
POLR1A-202ENST00000409024 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
POLR1A-202ENST00000409024 USP21Q9UK80 565 aa13.02□□□□□ -0.33
POLR1A-202ENST00000409024 NUDCQ9Y266 331 aa13.02□□□□□ -0.33
POLR1A-202ENST00000409024 USP31Q70CQ4 1352 aa13.02□□□□□ -0.33
POLR1A-202ENST00000409024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.01□□□□□ -0.33
POLR1A-202ENST00000409024 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
POLR1A-202ENST00000409024 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
POLR1A-202ENST00000409024 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
POLR1A-202ENST00000409024 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
POLR1A-202ENST00000409024 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
POLR1A-202ENST00000409024 NME9Q86XW9 330 aa12.99□□□□□ -0.33
POLR1A-202ENST00000409024 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
POLR1A-202ENST00000409024 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
POLR1A-202ENST00000409024 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
POLR1A-202ENST00000409024 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
POLR1A-202ENST00000409024 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
POLR1A-202ENST00000409024 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
POLR1A-202ENST00000409024 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
POLR1A-202ENST00000409024 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
POLR1A-202ENST00000409024 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
POLR1A-202ENST00000409024 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
POLR1A-202ENST00000409024 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
POLR1A-202ENST00000409024 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
POLR1A-202ENST00000409024 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
POLR1A-202ENST00000409024 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
POLR1A-202ENST00000409024 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
POLR1A-202ENST00000409024 ATRNO75882 1429 aa12.94□□□□□ -0.34
POLR1A-202ENST00000409024 MST1RQ04912 1400 aa12.94□□□□□ -0.34
POLR1A-202ENST00000409024 PSME1Q06323 249 aa12.93□□□□□ -0.34
POLR1A-202ENST00000409024 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
POLR1A-202ENST00000409024 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
POLR1A-202ENST00000409024 NHSL1Q5SYE7 1610 aa12.92□□□□□ -0.34
POLR1A-202ENST00000409024 FCHSD2O94868 740 aa12.92□□□□□ -0.34
POLR1A-202ENST00000409024 CCDC27Q2M243 656 aa12.92□□□□□ -0.34
POLR1A-202ENST00000409024 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
POLR1A-202ENST00000409024 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
POLR1A-202ENST00000409024 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
POLR1A-202ENST00000409024 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms