RNA–Protein interactions for RNA: ENST00000404289.1

AC099552.1-202, humanhuman

TSL 3

Gene AC099552.1, Length 582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099552.1-202ENST00000404289 USP21Q9UK80 565 aa20.02■□□□□ 0.8
AC099552.1-202ENST00000404289 PLCH1Q4KWH8 1693 aa20.02■□□□□ 0.8
AC099552.1-202ENST00000404289 AKAP12Q02952 1782 aa20.01■□□□□ 0.79
AC099552.1-202ENST00000404289 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
AC099552.1-202ENST00000404289 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
AC099552.1-202ENST00000404289 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
AC099552.1-202ENST00000404289 SLIT2O94813 1529 aa20.01■□□□□ 0.79
AC099552.1-202ENST00000404289 TNKS1BP1Q9C0C2 1729 aaKnown RBP20■□□□□ 0.79
AC099552.1-202ENST00000404289 RXRBP28702 533 aa19.99■□□□□ 0.79
AC099552.1-202ENST00000404289 TIMELESSQ9UNS1 1208 aa19.99■□□□□ 0.79
AC099552.1-202ENST00000404289 ATRNO75882 1429 aa19.99■□□□□ 0.79
AC099552.1-202ENST00000404289 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
AC099552.1-202ENST00000404289 NUTM2GQ5VZR2 741 aa19.98■□□□□ 0.79
AC099552.1-202ENST00000404289 TESK2Q96S53 571 aa19.98■□□□□ 0.79
AC099552.1-202ENST00000404289 NWD2Q9ULI1 1742 aa19.97■□□□□ 0.79
AC099552.1-202ENST00000404289 USP6P35125 1406 aa19.97■□□□□ 0.79
AC099552.1-202ENST00000404289 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
AC099552.1-202ENST00000404289 SSH2Q76I76 1423 aa19.96■□□□□ 0.79
AC099552.1-202ENST00000404289 RGS12O14924 1447 aa19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 RBM6P78332 1123 aaKnown RBP19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 NRAPQ86VF7 1730 aa19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 NRKQ7Z2Y5 1582 aa19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 USP47Q96K76 1375 aa19.95■□□□□ 0.78
AC099552.1-202ENST00000404289 PIK3C2AO00443 1686 aa19.94■□□□□ 0.78
AC099552.1-202ENST00000404289 MON2Q7Z3U7 1717 aa19.94■□□□□ 0.78
AC099552.1-202ENST00000404289 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
AC099552.1-202ENST00000404289 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
AC099552.1-202ENST00000404289 COL14A1Q05707 1796 aaKnown RBP19.93■□□□□ 0.78
AC099552.1-202ENST00000404289 ABTB2Q8N961 1025 aa19.93■□□□□ 0.78
AC099552.1-202ENST00000404289 CD163L1Q9NR16 1453 aa19.92■□□□□ 0.78
AC099552.1-202ENST00000404289 GLI3P10071 1580 aa19.92■□□□□ 0.78
AC099552.1-202ENST00000404289 UNC5CLQ8IV45 518 aa19.92■□□□□ 0.78
AC099552.1-202ENST00000404289 USP19O94966 1318 aa19.9■□□□□ 0.78
AC099552.1-202ENST00000404289 BRD4O60885 1362 aaPredicted RBP19.9■□□□□ 0.78
AC099552.1-202ENST00000404289 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
AC099552.1-202ENST00000404289 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
AC099552.1-202ENST00000404289 SLC12A5Q9H2X9 1139 aa19.88■□□□□ 0.77
AC099552.1-202ENST00000404289 TTC21BQ7Z4L5 1316 aa19.87■□□□□ 0.77
AC099552.1-202ENST00000404289 ZC3H6P61129 1189 aaKnown RBP19.87■□□□□ 0.77
AC099552.1-202ENST00000404289 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
AC099552.1-202ENST00000404289 BTG4Q9NY30 223 aa19.87■□□□□ 0.77
AC099552.1-202ENST00000404289 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
AC099552.1-202ENST00000404289 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
AC099552.1-202ENST00000404289 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
AC099552.1-202ENST00000404289 PRDM11Q9NQV5 511 aa19.86■□□□□ 0.77
AC099552.1-202ENST00000404289 SLIT3O75094 1523 aa19.86■□□□□ 0.77
AC099552.1-202ENST00000404289 VPS72Q15906 364 aa19.85■□□□□ 0.77
AC099552.1-202ENST00000404289 NLRP13Q86W25 1043 aa19.85■□□□□ 0.77
AC099552.1-202ENST00000404289 PUS7Q96PZ0 661 aaKnown RBP19.85■□□□□ 0.77
AC099552.1-202ENST00000404289 LMO7Q8WWI1 1683 aa19.84■□□□□ 0.77
AC099552.1-202ENST00000404289 NLRP6P59044 892 aa19.84■□□□□ 0.77
AC099552.1-202ENST00000404289 A0A1W2PP64 1363 aa19.83■□□□□ 0.77
AC099552.1-202ENST00000404289 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.77
AC099552.1-202ENST00000404289 GCP02774 474 aa19.83■□□□□ 0.77
AC099552.1-202ENST00000404289 CAMTA1Q9Y6Y1 1673 aa19.82■□□□□ 0.76
AC099552.1-202ENST00000404289 ZRANB1Q9UGI0 708 aa19.82■□□□□ 0.76
AC099552.1-202ENST00000404289 CPDO75976 1380 aa19.82■□□□□ 0.76
AC099552.1-202ENST00000404289 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
AC099552.1-202ENST00000404289 TTC21AQ8NDW8 1320 aa19.8■□□□□ 0.76
AC099552.1-202ENST00000404289 TMF1P82094 1093 aa19.8■□□□□ 0.76
AC099552.1-202ENST00000404289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.8■□□□□ 0.76
AC099552.1-202ENST00000404289 COL18A1P39060 1754 aa19.8■□□□□ 0.76
AC099552.1-202ENST00000404289 MYOM1P52179 1685 aa19.79■□□□□ 0.76
AC099552.1-202ENST00000404289 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
AC099552.1-202ENST00000404289 NME9Q86XW9 330 aa19.78■□□□□ 0.76
AC099552.1-202ENST00000404289 UPF1Q92900 1129 aaKnown RBP eCLIP19.78■□□□□ 0.76
AC099552.1-202ENST00000404289 RGPD5Q99666 1765 aa19.78■□□□□ 0.76
AC099552.1-202ENST00000404289 EDC4Q6P2E9 1401 aaKnown RBP19.77■□□□□ 0.76
AC099552.1-202ENST00000404289 NFAT5O94916 1531 aa19.77■□□□□ 0.76
AC099552.1-202ENST00000404289 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
AC099552.1-202ENST00000404289 HDGFL2Q7Z4V5 671 aaPredicted RBP19.77■□□□□ 0.76
AC099552.1-202ENST00000404289 USP31Q70CQ4 1352 aa19.76■□□□□ 0.75
AC099552.1-202ENST00000404289 NINLQ9Y2I6 1382 aa19.76■□□□□ 0.75
AC099552.1-202ENST00000404289 TERF2IPQ9NYB0 399 aa19.76■□□□□ 0.75
AC099552.1-202ENST00000404289 SPATA31A5Q5VU36 1347 aa19.76■□□□□ 0.75
AC099552.1-202ENST00000404289 SPATA31A7Q8IWB4 1347 aa19.76■□□□□ 0.75
AC099552.1-202ENST00000404289 ONECUT3O60422 494 aaPredicted RBP19.75■□□□□ 0.75
AC099552.1-202ENST00000404289 STRN4Q9NRL3 753 aa19.75■□□□□ 0.75
AC099552.1-202ENST00000404289 SOX12O15370 315 aa19.74■□□□□ 0.75
AC099552.1-202ENST00000404289 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
AC099552.1-202ENST00000404289 ANKRD36BQ8N2N9 1353 aa19.73■□□□□ 0.75
AC099552.1-202ENST00000404289 THSD7AQ9UPZ6 1657 aa19.73■□□□□ 0.75
AC099552.1-202ENST00000404289 ZBTB7CA1YPR0 619 aa19.73■□□□□ 0.75
AC099552.1-202ENST00000404289 HSPA5P11021 654 aaKnown RBP19.73■□□□□ 0.75
AC099552.1-202ENST00000404289 FAM98CQ17RN3 349 aaKnown RBP19.73■□□□□ 0.75
AC099552.1-202ENST00000404289 COL5A2P05997 1499 aaPredicted RBP19.73■□□□□ 0.75
AC099552.1-202ENST00000404289 LTN1O94822 1766 aa19.72■□□□□ 0.75
AC099552.1-202ENST00000404289 EP400Q96L91 3159 aa19.72■□□□□ 0.75
AC099552.1-202ENST00000404289 OVOS2A0A0J9YW53 1432 aa19.72■□□□□ 0.75
AC099552.1-202ENST00000404289 OVOS2Q6IE36 1432 aa19.72■□□□□ 0.75
AC099552.1-202ENST00000404289 LARP1Q6PKG0 1096 aaKnown RBP19.72■□□□□ 0.75
AC099552.1-202ENST00000404289 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
AC099552.1-202ENST00000404289 AATKQ6ZMQ8 1374 aa19.71■□□□□ 0.75
AC099552.1-202ENST00000404289 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
AC099552.1-202ENST00000404289 ARHGEF25Q86VW2 580 aa19.71■□□□□ 0.75
AC099552.1-202ENST00000404289 AXIN2Q9Y2T1 843 aa19.71■□□□□ 0.75
AC099552.1-202ENST00000404289 KCNH5Q8NCM2 988 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms