RNA–Protein interactions for RNA: ENST00000403642.5

CHEK2-207, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CHEK2, Length 1,359 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-207ENST00000403642 FNBP4Q8N3X1 1017 aaPredicted RBP14.43□□□□□ -0.1
CHEK2-207ENST00000403642 USP21Q9UK80 565 aa14.43□□□□□ -0.1
CHEK2-207ENST00000403642 SBNO2Q9Y2G9 1366 aa14.43□□□□□ -0.1
CHEK2-207ENST00000403642 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
CHEK2-207ENST00000403642 BCL9LQ86UU0 1499 aa14.41□□□□□ -0.1
CHEK2-207ENST00000403642 RXRBP28702 533 aa14.41□□□□□ -0.1
CHEK2-207ENST00000403642 QTRT2Q9H974 415 aaKnown RBP14.41□□□□□ -0.1
CHEK2-207ENST00000403642 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.41□□□□□ -0.1
CHEK2-207ENST00000403642 PLCH1Q4KWH8 1693 aa14.41□□□□□ -0.1
CHEK2-207ENST00000403642 SLIT2O94813 1529 aa14.4□□□□□ -0.1
CHEK2-207ENST00000403642 CDK12Q9NYV4 1490 aaPredicted RBP14.4□□□□□ -0.1
CHEK2-207ENST00000403642 ATRNO75882 1429 aa14.4□□□□□ -0.1
CHEK2-207ENST00000403642 PHRF1Q9P1Y6 1649 aaKnown RBP14.4□□□□□ -0.1
CHEK2-207ENST00000403642 RGS12O14924 1447 aa14.39□□□□□ -0.11
CHEK2-207ENST00000403642 ATAD2Q6PL18 1390 aa14.39□□□□□ -0.11
CHEK2-207ENST00000403642 CABP1Q9NZU7 370 aa14.38□□□□□ -0.11
CHEK2-207ENST00000403642 TRPC5Q9UL62 973 aaPredicted RBP14.38□□□□□ -0.11
CHEK2-207ENST00000403642 USP6P35125 1406 aa14.38□□□□□ -0.11
CHEK2-207ENST00000403642 RBM6P78332 1123 aaKnown RBP14.37□□□□□ -0.11
CHEK2-207ENST00000403642 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
CHEK2-207ENST00000403642 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
CHEK2-207ENST00000403642 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
CHEK2-207ENST00000403642 NRKQ7Z2Y5 1582 aa14.36□□□□□ -0.11
CHEK2-207ENST00000403642 UNC5CLQ8IV45 518 aa14.35□□□□□ -0.11
CHEK2-207ENST00000403642 TIMELESSQ9UNS1 1208 aa14.35□□□□□ -0.11
CHEK2-207ENST00000403642 AKAP12Q02952 1782 aa14.35□□□□□ -0.11
CHEK2-207ENST00000403642 NRAPQ86VF7 1730 aa14.35□□□□□ -0.11
CHEK2-207ENST00000403642 COL14A1Q05707 1796 aaKnown RBP14.35□□□□□ -0.11
CHEK2-207ENST00000403642 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
CHEK2-207ENST00000403642 USP47Q96K76 1375 aa14.34□□□□□ -0.11
CHEK2-207ENST00000403642 GLI3P10071 1580 aa14.34□□□□□ -0.11
CHEK2-207ENST00000403642 SSH2Q76I76 1423 aa14.34□□□□□ -0.11
CHEK2-207ENST00000403642 ST20-MTHFSA0A0A6YYL1 179 aa14.34□□□□□ -0.11
CHEK2-207ENST00000403642 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
CHEK2-207ENST00000403642 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.11
CHEK2-207ENST00000403642 CPSF1Q10570 1443 aaKnown RBP14.33□□□□□ -0.12
CHEK2-207ENST00000403642 FAM83GA6ND36 823 aa14.33□□□□□ -0.12
CHEK2-207ENST00000403642 TESK2Q96S53 571 aa14.33□□□□□ -0.12
CHEK2-207ENST00000403642 USP19O94966 1318 aa14.32□□□□□ -0.12
CHEK2-207ENST00000403642 MON2Q7Z3U7 1717 aa14.32□□□□□ -0.12
CHEK2-207ENST00000403642 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
CHEK2-207ENST00000403642 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
CHEK2-207ENST00000403642 CD163L1Q9NR16 1453 aa14.32□□□□□ -0.12
CHEK2-207ENST00000403642 PRDM11Q9NQV5 511 aa14.31□□□□□ -0.12
CHEK2-207ENST00000403642 BTG4Q9NY30 223 aa14.3□□□□□ -0.12
CHEK2-207ENST00000403642 SLIT3O75094 1523 aa14.3□□□□□ -0.12
CHEK2-207ENST00000403642 KTN1Q86UP2 1357 aaKnown RBP14.29□□□□□ -0.12
CHEK2-207ENST00000403642 VPS72Q15906 364 aa14.29□□□□□ -0.12
CHEK2-207ENST00000403642 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
CHEK2-207ENST00000403642 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
CHEK2-207ENST00000403642 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
CHEK2-207ENST00000403642 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
CHEK2-207ENST00000403642 CHRNA2Q15822 529 aa14.28□□□□□ -0.12
CHEK2-207ENST00000403642 TMC1Q8TDI8 760 aa14.28□□□□□ -0.12
CHEK2-207ENST00000403642 A0A1W2PP64 1363 aa14.27□□□□□ -0.12
CHEK2-207ENST00000403642 CPDO75976 1380 aa14.27□□□□□ -0.12
CHEK2-207ENST00000403642 LMO7Q8WWI1 1683 aa14.27□□□□□ -0.12
CHEK2-207ENST00000403642 NLRP6P59044 892 aa14.27□□□□□ -0.12
CHEK2-207ENST00000403642 CCDC9Q9Y3X0 531 aaKnown RBP14.27□□□□□ -0.12
CHEK2-207ENST00000403642 TTC21AQ8NDW8 1320 aa14.27□□□□□ -0.13
CHEK2-207ENST00000403642 GCP02774 474 aa14.26□□□□□ -0.13
CHEK2-207ENST00000403642 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
CHEK2-207ENST00000403642 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
CHEK2-207ENST00000403642 NINLQ9Y2I6 1382 aa14.26□□□□□ -0.13
CHEK2-207ENST00000403642 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
CHEK2-207ENST00000403642 EDC4Q6P2E9 1401 aaKnown RBP14.25□□□□□ -0.13
CHEK2-207ENST00000403642 USP54Q70EL1 1684 aa14.24□□□□□ -0.13
CHEK2-207ENST00000403642 TMF1P82094 1093 aa14.24□□□□□ -0.13
CHEK2-207ENST00000403642 HDGFL2Q7Z4V5 671 aaPredicted RBP14.24□□□□□ -0.13
CHEK2-207ENST00000403642 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHEK2-207ENST00000403642 CAMTA1Q9Y6Y1 1673 aa14.24□□□□□ -0.13
CHEK2-207ENST00000403642 EP400Q96L91 3159 aa14.24□□□□□ -0.13
CHEK2-207ENST00000403642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.23□□□□□ -0.13
CHEK2-207ENST00000403642 NFAT5O94916 1531 aa14.23□□□□□ -0.13
CHEK2-207ENST00000403642 STRN4Q9NRL3 753 aa14.22□□□□□ -0.13
CHEK2-207ENST00000403642 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
CHEK2-207ENST00000403642 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
CHEK2-207ENST00000403642 NME9Q86XW9 330 aa14.22□□□□□ -0.13
CHEK2-207ENST00000403642 SPATA31A5Q5VU36 1347 aa14.21□□□□□ -0.13
CHEK2-207ENST00000403642 SPATA31A7Q8IWB4 1347 aa14.21□□□□□ -0.13
CHEK2-207ENST00000403642 BRWD3Q6RI45 1802 aa14.21□□□□□ -0.13
CHEK2-207ENST00000403642 MYOM1P52179 1685 aa14.21□□□□□ -0.13
CHEK2-207ENST00000403642 THSD7AQ9UPZ6 1657 aa14.21□□□□□ -0.13
CHEK2-207ENST00000403642 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.14
CHEK2-207ENST00000403642 SOX12O15370 315 aa14.21□□□□□ -0.14
CHEK2-207ENST00000403642 FAM98CQ17RN3 349 aaKnown RBP14.21□□□□□ -0.14
CHEK2-207ENST00000403642 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.14
CHEK2-207ENST00000403642 ZRANB1Q9UGI0 708 aa14.21□□□□□ -0.14
CHEK2-207ENST00000403642 USP31Q70CQ4 1352 aa14.2□□□□□ -0.14
CHEK2-207ENST00000403642 ANKRD36BQ8N2N9 1353 aa14.2□□□□□ -0.14
CHEK2-207ENST00000403642 A0A0G2JS52 829 aa14.2□□□□□ -0.14
CHEK2-207ENST00000403642 ONECUT3O60422 494 aaPredicted RBP14.2□□□□□ -0.14
CHEK2-207ENST00000403642 MYT1Q01538 1121 aa14.2□□□□□ -0.14
CHEK2-207ENST00000403642 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
CHEK2-207ENST00000403642 OVOS2A0A0J9YW53 1432 aa14.19□□□□□ -0.14
CHEK2-207ENST00000403642 COL18A1P39060 1754 aa14.19□□□□□ -0.14
CHEK2-207ENST00000403642 SPATA31A1Q5TZJ5 1347 aa14.19□□□□□ -0.14
CHEK2-207ENST00000403642 OVOS2Q6IE36 1432 aa14.19□□□□□ -0.14
CHEK2-207ENST00000403642 KCNH5Q8NCM2 988 aa14.19□□□□□ -0.14
CHEK2-207ENST00000403642 EVA1CP58658 441 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms