RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
RERE-204ENST00000400908 NUTM2FA1L443 756 aa16.57■□□□□ 0.24
RERE-204ENST00000400908 RBM10P98175 930 aaKnown RBP16.57■□□□□ 0.24
RERE-204ENST00000400908 ZKSCAN2Q63HK3 967 aa16.57■□□□□ 0.24
RERE-204ENST00000400908 MAGEC2Q9UBF1 373 aaPredicted RBP16.57■□□□□ 0.24
RERE-204ENST00000400908 DAPK1P53355 1430 aa16.57■□□□□ 0.24
RERE-204ENST00000400908 AMPHP49418 695 aa16.56■□□□□ 0.24
RERE-204ENST00000400908 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
RERE-204ENST00000400908 NF2P35240 595 aa16.56■□□□□ 0.24
RERE-204ENST00000400908 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
RERE-204ENST00000400908 CNTLNQ9NXG0 1405 aa16.56■□□□□ 0.24
RERE-204ENST00000400908 CCDC181Q5TID7 509 aa16.56■□□□□ 0.24
RERE-204ENST00000400908 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
RERE-204ENST00000400908 RNF214Q8ND24 703 aa16.55■□□□□ 0.24
RERE-204ENST00000400908 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
RERE-204ENST00000400908 XBP1P17861 261 aa16.55■□□□□ 0.24
RERE-204ENST00000400908 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
RERE-204ENST00000400908 DHX8Q14562 1220 aaKnown RBP16.55■□□□□ 0.24
RERE-204ENST00000400908 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
RERE-204ENST00000400908 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
RERE-204ENST00000400908 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
RERE-204ENST00000400908 ZNHIT6Q9NWK9 470 aaKnown RBP16.55■□□□□ 0.24
RERE-204ENST00000400908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.243e-9■□□□□ 9.8
RERE-204ENST00000400908 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
RERE-204ENST00000400908 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
RERE-204ENST00000400908 VPS37DQ86XT2 251 aa16.54■□□□□ 0.24
RERE-204ENST00000400908 INTS3Q68E01 1043 aaKnown RBP16.53■□□□□ 0.24
RERE-204ENST00000400908 TXLNBQ8N3L3 684 aa16.53■□□□□ 0.24
RERE-204ENST00000400908 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
RERE-204ENST00000400908 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.24
RERE-204ENST00000400908 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.24
RERE-204ENST00000400908 TMEM132AQ24JP5 1023 aa16.52■□□□□ 0.24
RERE-204ENST00000400908 CCDC112Q8NEF3 446 aa16.52■□□□□ 0.24
RERE-204ENST00000400908 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.23
RERE-204ENST00000400908 TSPY26PQ9H489 355 aa16.52■□□□□ 0.23
RERE-204ENST00000400908 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
RERE-204ENST00000400908 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
RERE-204ENST00000400908 BRPF1P55201 1214 aaPredicted RBP16.51■□□□□ 0.23
RERE-204ENST00000400908 LTV1Q96GA3 475 aaPredicted RBP16.5■□□□□ 0.23
RERE-204ENST00000400908 SLC26A8Q96RN1 970 aa16.5■□□□□ 0.23
RERE-204ENST00000400908 MBD3O95983 291 aa16.5■□□□□ 0.23
RERE-204ENST00000400908 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
RERE-204ENST00000400908 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
RERE-204ENST00000400908 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.5■□□□□ 0.23
RERE-204ENST00000400908 PLEKHH2Q8IVE3 1493 aa16.5■□□□□ 0.23
RERE-204ENST00000400908 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 PDCL3Q9H2J4 239 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 NAIPQ13075 1403 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
RERE-204ENST00000400908 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 FAM193AP78312 1265 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
RERE-204ENST00000400908 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
RERE-204ENST00000400908 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
RERE-204ENST00000400908 CCDC97Q96F63 343 aaPredicted RBP16.48■□□□□ 0.23
RERE-204ENST00000400908 CDK5RAP3Q96JB5 506 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 DDX19BQ9UMR2 479 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 G3BP1Q13283 466 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■□□□□ 9
RERE-204ENST00000400908 NBPF8Q3BBV2 869 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 CCDC91Q7Z6B0 441 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 TXLNAP40222 546 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
RERE-204ENST00000400908 NFKBIBQ15653 356 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 CEP63Q96MT8 703 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 E9PSI1 815 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 C1orf141Q5JVX7 400 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 EXOC6Q8TAG9 804 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 ERICH4A6NGS2 130 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
RERE-204ENST00000400908 PLB1Q6P1J6 1458 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
RERE-204ENST00000400908 ERC2O15083 957 aa16.46■□□□□ 0.23
RERE-204ENST00000400908 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
RERE-204ENST00000400908 CCDC102AQ96A19 550 aa16.46■□□□□ 0.23
RERE-204ENST00000400908 STAMBPO95630 424 aa16.46■□□□□ 0.23
RERE-204ENST00000400908 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.23
RERE-204ENST00000400908 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
RERE-204ENST00000400908 BCCIPQ9P287 314 aaKnown RBP eCLIP16.45■□□□□ 0.22
RERE-204ENST00000400908 PLIN1O60240 522 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
RERE-204ENST00000400908 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
RERE-204ENST00000400908 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 COG3Q96JB2 828 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 APAF1O14727 1248 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 MAP2K1Q02750 393 aaPredicted RBP16.45■□□□□ 0.22
RERE-204ENST00000400908 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
RERE-204ENST00000400908 WDR97A6NE52 1622 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 SERPINC1P01008 464 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 PSMA5P28066 241 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 ZNF608Q9ULD9 1512 aaPredicted RBP16.44■□□□□ 0.22
RERE-204ENST00000400908 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms