RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ABCA3Q99758 1704 aa22.7■■□□□ 1.22
ATG4B-203ENST00000400772 FAM83GA6ND36 823 aa22.69■■□□□ 1.22
ATG4B-203ENST00000400772 UPF1Q92900 1129 aaKnown RBP eCLIP22.69■■□□□ 1.22
ATG4B-203ENST00000400772 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
ATG4B-203ENST00000400772 GJD4Q96KN9 370 aaPredicted RBP22.68■■□□□ 1.22
ATG4B-203ENST00000400772 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
ATG4B-203ENST00000400772 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.65■■□□□ 1.22
ATG4B-203ENST00000400772 EVC2Q86UK5 1308 aa22.63■■□□□ 1.21
ATG4B-203ENST00000400772 CABP1Q9NZU7 370 aa22.63■■□□□ 1.21
ATG4B-203ENST00000400772 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
ATG4B-203ENST00000400772 NUTM2GQ5VZR2 741 aa22.62■■□□□ 1.21
ATG4B-203ENST00000400772 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
ATG4B-203ENST00000400772 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
ATG4B-203ENST00000400772 VPS72Q15906 364 aa22.61■■□□□ 1.21
ATG4B-203ENST00000400772 PLCH1Q4KWH8 1693 aa22.61■■□□□ 1.21
ATG4B-203ENST00000400772 GLI3P10071 1580 aa22.6■■□□□ 1.21
ATG4B-203ENST00000400772 NWD2Q9ULI1 1742 aa22.6■■□□□ 1.21
ATG4B-203ENST00000400772 ABTB2Q8N961 1025 aa22.58■■□□□ 1.21
ATG4B-203ENST00000400772 BTG4Q9NY30 223 aa22.58■■□□□ 1.21
ATG4B-203ENST00000400772 COL14A1Q05707 1796 aaKnown RBP22.55■■□□□ 1.2
ATG4B-203ENST00000400772 KIAA0232Q92628 1395 aa22.54■■□□□ 1.2
ATG4B-203ENST00000400772 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
ATG4B-203ENST00000400772 ONECUT3O60422 494 aaPredicted RBP22.54■■□□□ 1.2
ATG4B-203ENST00000400772 PRDM11Q9NQV5 511 aa22.54■■□□□ 1.2
ATG4B-203ENST00000400772 USP6P35125 1406 aa22.54■■□□□ 1.2
ATG4B-203ENST00000400772 SSH2Q76I76 1423 aa22.54■■□□□ 1.2
ATG4B-203ENST00000400772 NRAPQ86VF7 1730 aa22.54■■□□□ 1.2
ATG4B-203ENST00000400772 PHRF1Q9P1Y6 1649 aaKnown RBP22.53■■□□□ 1.2
ATG4B-203ENST00000400772 BRD4O60885 1362 aaPredicted RBP22.53■■□□□ 1.2
ATG4B-203ENST00000400772 ZC3H6P61129 1189 aaKnown RBP22.53■■□□□ 1.2
ATG4B-203ENST00000400772 USP19O94966 1318 aa22.53■■□□□ 1.2
ATG4B-203ENST00000400772 ATAD2Q6PL18 1390 aa22.52■■□□□ 1.2
ATG4B-203ENST00000400772 CHRNA2Q15822 529 aa22.52■■□□□ 1.2
ATG4B-203ENST00000400772 CCDC9Q9Y3X0 531 aaKnown RBP22.52■■□□□ 1.2
ATG4B-203ENST00000400772 NLRP13Q86W25 1043 aa22.51■■□□□ 1.19
ATG4B-203ENST00000400772 SEPT12Q8IYM1 358 aa22.51■■□□□ 1.19
ATG4B-203ENST00000400772 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
ATG4B-203ENST00000400772 GCP02774 474 aa22.49■■□□□ 1.19
ATG4B-203ENST00000400772 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
ATG4B-203ENST00000400772 NRKQ7Z2Y5 1582 aa22.48■■□□□ 1.19
ATG4B-203ENST00000400772 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
ATG4B-203ENST00000400772 SPATA31A5Q5VU36 1347 aa22.47■■□□□ 1.19
ATG4B-203ENST00000400772 SPATA31A7Q8IWB4 1347 aa22.47■■□□□ 1.19
ATG4B-203ENST00000400772 NLRP6P59044 892 aa22.46■■□□□ 1.19
ATG4B-203ENST00000400772 TESK2Q96S53 571 aa22.46■■□□□ 1.19
ATG4B-203ENST00000400772 TTC21BQ7Z4L5 1316 aa22.46■■□□□ 1.19
ATG4B-203ENST00000400772 CPDO75976 1380 aa22.46■■□□□ 1.19
ATG4B-203ENST00000400772 BRWD3Q6RI45 1802 aa22.45■■□□□ 1.19
ATG4B-203ENST00000400772 ST20-MTHFSA0A0A6YYL1 179 aa22.45■■□□□ 1.18
ATG4B-203ENST00000400772 FAM98CQ17RN3 349 aaKnown RBP22.45■■□□□ 1.18
ATG4B-203ENST00000400772 AKAP12Q02952 1782 aa22.44■■□□□ 1.18
ATG4B-203ENST00000400772 EP400Q96L91 3159 aa22.44■■□□□ 1.18
ATG4B-203ENST00000400772 STRN4Q9NRL3 753 aa22.43■■□□□ 1.18
ATG4B-203ENST00000400772 PIK3C2AO00443 1686 aa22.42■■□□□ 1.18
ATG4B-203ENST00000400772 CD163L1Q9NR16 1453 aa22.42■■□□□ 1.18
ATG4B-203ENST00000400772 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
ATG4B-203ENST00000400772 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
ATG4B-203ENST00000400772 CAMTA1Q9Y6Y1 1673 aa22.42■■□□□ 1.18
ATG4B-203ENST00000400772 SLIT3O75094 1523 aa22.41■■□□□ 1.18
ATG4B-203ENST00000400772 KTN1Q86UP2 1357 aaKnown RBP22.41■■□□□ 1.18
ATG4B-203ENST00000400772 SPATA31A1Q5TZJ5 1347 aa22.41■■□□□ 1.18
ATG4B-203ENST00000400772 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
ATG4B-203ENST00000400772 SLC12A5Q9H2X9 1139 aa22.41■■□□□ 1.18
ATG4B-203ENST00000400772 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
ATG4B-203ENST00000400772 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
ATG4B-203ENST00000400772 LMO7Q8WWI1 1683 aa22.39■■□□□ 1.18
ATG4B-203ENST00000400772 TTC21AQ8NDW8 1320 aa22.39■■□□□ 1.18
ATG4B-203ENST00000400772 CCDC125Q86Z20 511 aa22.39■■□□□ 1.17
ATG4B-203ENST00000400772 EVA1CP58658 441 aa22.38■■□□□ 1.17
ATG4B-203ENST00000400772 LARP1Q6PKG0 1096 aaKnown RBP22.38■■□□□ 1.17
ATG4B-203ENST00000400772 A0A0G2JS52 829 aa22.37■■□□□ 1.17
ATG4B-203ENST00000400772 MYT1Q01538 1121 aa22.37■■□□□ 1.17
ATG4B-203ENST00000400772 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
ATG4B-203ENST00000400772 MON2Q7Z3U7 1717 aa22.35■■□□□ 1.17
ATG4B-203ENST00000400772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.35■■□□□ 1.17
ATG4B-203ENST00000400772 THSD7AQ9UPZ6 1657 aa22.35■■□□□ 1.17
ATG4B-203ENST00000400772 AATKQ6ZMQ8 1374 aa22.35■■□□□ 1.17
ATG4B-203ENST00000400772 USP47Q96K76 1375 aa22.35■■□□□ 1.17
ATG4B-203ENST00000400772 ZBTB7CA1YPR0 619 aa22.34■■□□□ 1.17
ATG4B-203ENST00000400772 USP35Q9P2H5 1018 aa22.34■■□□□ 1.17
ATG4B-203ENST00000400772 COL5A2P05997 1499 aaPredicted RBP22.34■■□□□ 1.17
ATG4B-203ENST00000400772 BLMP54132 1417 aaPredicted RBP22.33■■□□□ 1.17
ATG4B-203ENST00000400772 SLC24A1O60721 1099 aa22.33■■□□□ 1.17
ATG4B-203ENST00000400772 HDGFL2Q7Z4V5 671 aaPredicted RBP22.33■■□□□ 1.17
ATG4B-203ENST00000400772 ARHGEF25Q86VW2 580 aa22.33■■□□□ 1.17
ATG4B-203ENST00000400772 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
ATG4B-203ENST00000400772 AXIN2Q9Y2T1 843 aa22.33■■□□□ 1.17
ATG4B-203ENST00000400772 BARGINQ6ZT62 677 aa22.32■■□□□ 1.16
ATG4B-203ENST00000400772 NME9Q86XW9 330 aa22.32■■□□□ 1.16
ATG4B-203ENST00000400772 A0A1W2PP64 1363 aa22.32■■□□□ 1.16
ATG4B-203ENST00000400772 USP31Q70CQ4 1352 aa22.32■■□□□ 1.16
ATG4B-203ENST00000400772 COL18A1P39060 1754 aa22.32■■□□□ 1.16
ATG4B-203ENST00000400772 SOX12O15370 315 aa22.31■■□□□ 1.16
ATG4B-203ENST00000400772 FAM182BQ5T319 152 aa22.31■■□□□ 1.16
ATG4B-203ENST00000400772 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
ATG4B-203ENST00000400772 TCP11L2Q8N4U5 519 aa22.3■■□□□ 1.16
ATG4B-203ENST00000400772 NFAT5O94916 1531 aa22.29■■□□□ 1.16
ATG4B-203ENST00000400772 EDC4Q6P2E9 1401 aaKnown RBP22.29■■□□□ 1.16
ATG4B-203ENST00000400772 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
ATG4B-203ENST00000400772 TMF1P82094 1093 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms