RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
CDC42-203ENST00000400259 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDC42-203ENST00000400259 ARHGAP23Q9P227 1491 aa20.52■□□□□ 0.87
CDC42-203ENST00000400259 TOPAZ1Q8N9V7 1692 aa20.52■□□□□ 0.87
CDC42-203ENST00000400259 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
CDC42-203ENST00000400259 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
CDC42-203ENST00000400259 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.5■□□□□ 0.87
CDC42-203ENST00000400259 RRP7AQ9Y3A4 280 aaKnown RBP20.5■□□□□ 0.87
CDC42-203ENST00000400259 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
CDC42-203ENST00000400259 ROBO2Q9HCK4 1378 aa20.48■□□□□ 0.87
CDC42-203ENST00000400259 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
CDC42-203ENST00000400259 KDM2BQ8NHM5 1336 aa20.47■□□□□ 0.87
CDC42-203ENST00000400259 NRKQ7Z2Y5 1582 aa20.47■□□□□ 0.87
CDC42-203ENST00000400259 BCAR3O75815 825 aa20.46■□□□□ 0.87
CDC42-203ENST00000400259 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
CDC42-203ENST00000400259 DIP2AQ14689 1571 aa20.46■□□□□ 0.87
CDC42-203ENST00000400259 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
CDC42-203ENST00000400259 LTKP29376 864 aa20.46■□□□□ 0.87
CDC42-203ENST00000400259 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
CDC42-203ENST00000400259 MS4A1P11836 297 aa20.44■□□□□ 0.86
CDC42-203ENST00000400259 PDE3AQ14432 1141 aa20.44■□□□□ 0.86
CDC42-203ENST00000400259 AATKQ6ZMQ8 1374 aa20.44■□□□□ 0.86
CDC42-203ENST00000400259 CDK12Q9NYV4 1490 aaPredicted RBP20.44■□□□□ 0.86
CDC42-203ENST00000400259 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
CDC42-203ENST00000400259 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
CDC42-203ENST00000400259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDC42-203ENST00000400259 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
CDC42-203ENST00000400259 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
CDC42-203ENST00000400259 TMPOP42166 694 aaKnown RBP20.42■□□□□ 0.86
CDC42-203ENST00000400259 POLKQ9UBT6 870 aa20.42■□□□□ 0.86
CDC42-203ENST00000400259 CEBPAP49715 358 aaPredicted RBP20.42■□□□□ 0.86
CDC42-203ENST00000400259 CENPQQ7L2Z9 268 aaPredicted RBP20.42■□□□□ 0.86
CDC42-203ENST00000400259 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
CDC42-203ENST00000400259 PRR36Q9H6K5 1346 aa20.41■□□□□ 0.86
CDC42-203ENST00000400259 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
CDC42-203ENST00000400259 RARSP54136 660 aaKnown RBP20.41■□□□□ 0.86
CDC42-203ENST00000400259 ZNF692Q9BU19 519 aaPredicted RBP20.41■□□□□ 0.86
CDC42-203ENST00000400259 EID1Q9Y6B2 187 aa20.41■□□□□ 0.86
CDC42-203ENST00000400259 IL16Q14005 1332 aa20.4■□□□□ 0.86
CDC42-203ENST00000400259 ERICH6Q7L0X2 663 aa20.4■□□□□ 0.86
CDC42-203ENST00000400259 PTCH1Q13635 1447 aa20.39■□□□□ 0.86
CDC42-203ENST00000400259 RIMS1Q86UR5 1692 aaKnown RBP20.39■□□□□ 0.85
CDC42-203ENST00000400259 FCHSD2O94868 740 aa20.39■□□□□ 0.85
CDC42-203ENST00000400259 CT47B1P0C2W7 299 aaPredicted RBP20.39■□□□□ 0.85
CDC42-203ENST00000400259 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
CDC42-203ENST00000400259 NALCNQ8IZF0 1738 aa20.38■□□□□ 0.85
CDC42-203ENST00000400259 XRN1Q8IZH2 1706 aaKnown RBP20.38■□□□□ 0.85
CDC42-203ENST00000400259 NME9Q86XW9 330 aa20.37■□□□□ 0.85
CDC42-203ENST00000400259 TBX22Q9Y458 520 aa20.37■□□□□ 0.85
CDC42-203ENST00000400259 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
CDC42-203ENST00000400259 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
CDC42-203ENST00000400259 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
CDC42-203ENST00000400259 COG3Q96JB2 828 aa20.34■□□□□ 0.85
CDC42-203ENST00000400259 AAMPQ13685 434 aa20.34■□□□□ 0.85
CDC42-203ENST00000400259 THEMISQ8N1K5 641 aaPredicted RBP20.34■□□□□ 0.85
CDC42-203ENST00000400259 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.85
CDC42-203ENST00000400259 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
CDC42-203ENST00000400259 DLG5Q8TDM6 1919 aa20.32■□□□□ 0.84
CDC42-203ENST00000400259 IL13P35225 146 aa20.32■□□□□ 0.84
CDC42-203ENST00000400259 RIPK4P57078 832 aa20.32■□□□□ 0.84
CDC42-203ENST00000400259 SKAP1Q86WV1 359 aa20.32■□□□□ 0.84
CDC42-203ENST00000400259 SLC26A8Q96RN1 970 aa20.32■□□□□ 0.84
CDC42-203ENST00000400259 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
CDC42-203ENST00000400259 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 USP6P35125 1406 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 FBLN1P23142 703 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 PDE4AP27815 886 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 BACH2Q9BYV9 841 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
CDC42-203ENST00000400259 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
CDC42-203ENST00000400259 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
CDC42-203ENST00000400259 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
CDC42-203ENST00000400259 PPM1GO15355 546 aaPredicted RBP20.29■□□□□ 0.84
CDC42-203ENST00000400259 PANK1Q8TE04 598 aa20.29■□□□□ 0.84
CDC42-203ENST00000400259 AMOTL2Q9Y2J4 779 aa20.29■□□□□ 0.84
CDC42-203ENST00000400259 ACEP12821 1306 aa20.29■□□□□ 0.84
CDC42-203ENST00000400259 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
CDC42-203ENST00000400259 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
CDC42-203ENST00000400259 CLUAP1Q96AJ1 413 aa20.28■□□□□ 0.84
CDC42-203ENST00000400259 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
CDC42-203ENST00000400259 FRAT1Q92837 279 aaPredicted RBP20.28■□□□□ 0.84
CDC42-203ENST00000400259 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
CDC42-203ENST00000400259 NEFMP07197 916 aa20.27■□□□□ 0.84
CDC42-203ENST00000400259 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
CDC42-203ENST00000400259 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.83
CDC42-203ENST00000400259 EXOSC9Q06265 439 aaKnown RBP20.26■□□□□ 0.83
CDC42-203ENST00000400259 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
CDC42-203ENST00000400259 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
CDC42-203ENST00000400259 FMN2Q9NZ56 1722 aa20.26■□□□□ 0.83
CDC42-203ENST00000400259 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
CDC42-203ENST00000400259 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
CDC42-203ENST00000400259 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
CDC42-203ENST00000400259 PEAK1Q9H792 1746 aa20.25■□□□□ 0.83
CDC42-203ENST00000400259 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
CDC42-203ENST00000400259 RLBP1P12271 317 aa20.24■□□□□ 0.83
CDC42-203ENST00000400259 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
CDC42-203ENST00000400259 ADAMTSL3P82987 1691 aa20.23■□□□□ 0.83
CDC42-203ENST00000400259 ANKARQ7Z5J8 1434 aa20.23■□□□□ 0.83
CDC42-203ENST00000400259 RRS1Q15050 365 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms