RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
CSNK2A1-204ENST00000400227 SOCS7O14512 581 aa10.72□□□□□ -0.69
CSNK2A1-204ENST00000400227 SLC19A1P41440 591 aa10.72□□□□□ -0.69
CSNK2A1-204ENST00000400227 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
CSNK2A1-204ENST00000400227 HMX1Q9NP08 348 aaPredicted RBP10.72□□□□□ -0.69
CSNK2A1-204ENST00000400227 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
CSNK2A1-204ENST00000400227 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
CSNK2A1-204ENST00000400227 V9GY48 417 aaPredicted RBP10.71□□□□□ -0.69
CSNK2A1-204ENST00000400227 NR6A1Q15406 480 aa10.69□□□□□ -0.7
CSNK2A1-204ENST00000400227 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
CSNK2A1-204ENST00000400227 TRIM26Q12899 539 aaPredicted RBP10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 TRIM32Q13049 653 aa10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 CD2BP2O95400 341 aaKnown RBP10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 MCM6Q14566 821 aa10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 SPRYD7Q5W111 196 aa10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 EPS8L1Q8TE68 723 aa10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
CSNK2A1-204ENST00000400227 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
CSNK2A1-204ENST00000400227 BICRAQ9NZM4 1560 aa10.66□□□□□ -0.7
CSNK2A1-204ENST00000400227 FLIIQ13045 1269 aa10.66□□□□□ -0.7
CSNK2A1-204ENST00000400227 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
CSNK2A1-204ENST00000400227 APBB1O00213 710 aa10.65□□□□□ -0.7
CSNK2A1-204ENST00000400227 ZNF598Q86UK7 904 aaKnown RBP10.64□□□□□ -0.71
CSNK2A1-204ENST00000400227 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
CSNK2A1-204ENST00000400227 BAP1Q92560 729 aa10.64□□□□□ -0.71
CSNK2A1-204ENST00000400227 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
CSNK2A1-204ENST00000400227 FKBPLQ9UIM3 349 aa10.63□□□□□ -0.71
CSNK2A1-204ENST00000400227 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
CSNK2A1-204ENST00000400227 WNT7BP56706 349 aa10.62□□□□□ -0.71
CSNK2A1-204ENST00000400227 ZNF511Q8NB15 262 aa10.62□□□□□ -0.71
CSNK2A1-204ENST00000400227 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
CSNK2A1-204ENST00000400227 SH3BP2P78314 561 aa10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 SKOR1P84550 965 aa10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 ZNF697Q5TEC3 545 aa10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 GPKOWQ92917 476 aaPredicted RBP eCLIP10.61□□□□□ -0.719e-9■□□□□ 8.3
CSNK2A1-204ENST00000400227 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 NDUFB9Q9Y6M9 179 aa10.61□□□□□ -0.71
CSNK2A1-204ENST00000400227 PDXDC2PQ6P474 469 aa10.58□□□□□ -0.72
CSNK2A1-204ENST00000400227 PEG3Q9GZU2 1588 aa10.58□□□□□ -0.72
CSNK2A1-204ENST00000400227 PRM3Q9NNZ6 103 aa10.58□□□□□ -0.72
CSNK2A1-204ENST00000400227 GPR37L1O60883 481 aa10.57□□□□□ -0.72
CSNK2A1-204ENST00000400227 PPARGC1BQ86YN6 1023 aaKnown RBP10.57□□□□□ -0.72
CSNK2A1-204ENST00000400227 ABCC8Q09428 1581 aa10.57□□□□□ -0.72
CSNK2A1-204ENST00000400227 WNT7AO00755 349 aa10.56□□□□□ -0.72
CSNK2A1-204ENST00000400227 RC3H1Q5TC82 1133 aaKnown RBP10.56□□□□□ -0.72
CSNK2A1-204ENST00000400227 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
CSNK2A1-204ENST00000400227 FOXJ1Q92949 421 aa10.56□□□□□ -0.72
CSNK2A1-204ENST00000400227 TBC1D2BQ9UPU7 963 aa10.56□□□□□ -0.72
CSNK2A1-204ENST00000400227 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
CSNK2A1-204ENST00000400227 PKD2L1Q9P0L9 805 aa10.55□□□□□ -0.72
CSNK2A1-204ENST00000400227 UBTFP17480 764 aaKnown RBP10.55□□□□□ -0.72
CSNK2A1-204ENST00000400227 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
CSNK2A1-204ENST00000400227 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
CSNK2A1-204ENST00000400227 GDF9O60383 454 aa10.54□□□□□ -0.72
CSNK2A1-204ENST00000400227 TRIM67Q6ZTA4 783 aa10.54□□□□□ -0.72
CSNK2A1-204ENST00000400227 GDPD2Q9HCC8 539 aa10.54□□□□□ -0.72
CSNK2A1-204ENST00000400227 COG6Q9Y2V7 657 aa10.54□□□□□ -0.72
CSNK2A1-204ENST00000400227 VARSP26640 1264 aaKnown RBP10.53□□□□□ -0.72
CSNK2A1-204ENST00000400227 PTK2Q05397 1052 aa10.53□□□□□ -0.72
CSNK2A1-204ENST00000400227 FOXC1Q12948 553 aa10.53□□□□□ -0.72
CSNK2A1-204ENST00000400227 AGERQ15109 404 aa10.53□□□□□ -0.72
CSNK2A1-204ENST00000400227 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
CSNK2A1-204ENST00000400227 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
CSNK2A1-204ENST00000400227 PRR20EP86478 221 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 PRR20CP86479 221 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 PRR20DP86480 221 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 PRR20BP86481 221 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 PRR20AP86496 221 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 POM121Q96HA1 1249 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 MRGPRX2Q96LB1 330 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 OCSTAMPQ9BR26 566 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 ARHGAP9Q9BRR9 750 aa10.52□□□□□ -0.73
CSNK2A1-204ENST00000400227 TNFRSF10AO00220 468 aa10.5□□□□□ -0.73
CSNK2A1-204ENST00000400227 RAD21O60216 631 aa10.5□□□□□ -0.73
CSNK2A1-204ENST00000400227 MAGEB6P1A0A0J9YX57 407 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 ZBBXA8MT70 800 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 ABL2P42684 1182 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 IRF5Q13568 498 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 C1QTNF2Q9BXJ5 285 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 SIAH2O43255 324 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 FBXO45P0C2W1 286 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 FAM174AQ8TBP5 190 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 CARD14Q9BXL6 1004 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
CSNK2A1-204ENST00000400227 ZBTB33Q86T24 672 aa10.48□□□□□ -0.73
CSNK2A1-204ENST00000400227 NR1H3Q13133 447 aa10.47□□□□□ -0.73
CSNK2A1-204ENST00000400227 ERFEQ4G0M1 354 aa10.47□□□□□ -0.73
CSNK2A1-204ENST00000400227 ADAM32Q8TC27 787 aa10.47□□□□□ -0.73
CSNK2A1-204ENST00000400227 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
CSNK2A1-204ENST00000400227 TRMT44Q8IYL2 757 aaKnown RBP10.46□□□□□ -0.74
CSNK2A1-204ENST00000400227 MPNDQ8N594 471 aa10.46□□□□□ -0.74
CSNK2A1-204ENST00000400227 SNIP1Q8TAD8 396 aaKnown RBP10.46□□□□□ -0.74
CSNK2A1-204ENST00000400227 TOR4AQ9NXH8 423 aa10.46□□□□□ -0.74
CSNK2A1-204ENST00000400227 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
CSNK2A1-204ENST00000400227 CYP4X1Q8N118 509 aa10.45□□□□□ -0.74
CSNK2A1-204ENST00000400227 EEA1Q15075 1411 aa10.45□□□□□ -0.74
CSNK2A1-204ENST00000400227 ATAD2BQ9ULI0 1458 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms