RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 KIF20BQ96Q89 1820 aa33.55■■■□□ 2.96
RUNX1-205ENST00000399240 TTC21BQ7Z4L5 1316 aa33.54■■■□□ 2.96
RUNX1-205ENST00000399240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.54■■■□□ 2.96
RUNX1-205ENST00000399240 PHLPP1O60346 1717 aa33.54■■■□□ 2.96
RUNX1-205ENST00000399240 SOS2Q07890 1332 aaPredicted RBP33.53■■■□□ 2.96
RUNX1-205ENST00000399240 KNSTRNQ9Y448 316 aa33.53■■■□□ 2.96
RUNX1-205ENST00000399240 PIK3C2AO00443 1686 aa33.52■■■□□ 2.96
RUNX1-205ENST00000399240 ALS2Q96Q42 1657 aa33.51■■■□□ 2.95
RUNX1-205ENST00000399240 BRD4O60885 1362 aaPredicted RBP33.51■■■□□ 2.95
RUNX1-205ENST00000399240 PAK3O75914 559 aaPredicted RBP33.5■■■□□ 2.95
RUNX1-205ENST00000399240 COL16A1Q07092 1604 aaPredicted RBP33.49■■■□□ 2.95
RUNX1-205ENST00000399240 AMER1Q5JTC6 1135 aaPredicted RBP33.48■■■□□ 2.95
RUNX1-205ENST00000399240 SBNO1A3KN83 1393 aa33.48■■■□□ 2.95
RUNX1-205ENST00000399240 TTC21AQ8NDW8 1320 aa33.47■■■□□ 2.95
RUNX1-205ENST00000399240 NME9Q86XW9 330 aa33.47■■■□□ 2.95
RUNX1-205ENST00000399240 CGNL1Q0VF96 1302 aa33.46■■■□□ 2.95
RUNX1-205ENST00000399240 FYB1O15117 783 aa33.46■■■□□ 2.95
RUNX1-205ENST00000399240 MARF1Q9Y4F3 1742 aaKnown RBP33.45■■■□□ 2.95
RUNX1-205ENST00000399240 TNS3Q68CZ2 1445 aa33.45■■■□□ 2.95
RUNX1-205ENST00000399240 ANKRD26Q9UPS8 1709 aa33.45■■■□□ 2.94
RUNX1-205ENST00000399240 SPATA31A3Q5VYP0 1347 aa33.43■■■□□ 2.94
RUNX1-205ENST00000399240 ZRANB1Q9UGI0 708 aa33.43■■■□□ 2.94
RUNX1-205ENST00000399240 ABTB2Q8N961 1025 aa33.42■■■□□ 2.94
RUNX1-205ENST00000399240 GGNBP2Q9H3C7 697 aa33.42■■■□□ 2.94
RUNX1-205ENST00000399240 USP54Q70EL1 1684 aa33.41■■■□□ 2.94
RUNX1-205ENST00000399240 CNGB1Q14028 1251 aaPredicted RBP33.41■■■□□ 2.94
RUNX1-205ENST00000399240 CC2D1BQ5T0F9 858 aaKnown RBP33.4■■■□□ 2.94
RUNX1-205ENST00000399240 NUTM2GQ5VZR2 741 aa33.4■■■□□ 2.94
RUNX1-205ENST00000399240 NPC1L1Q9UHC9 1359 aa33.4■■■□□ 2.94
RUNX1-205ENST00000399240 LMOD2Q6P5Q4 547 aa33.39■■■□□ 2.94
RUNX1-205ENST00000399240 OVOS2A0A0J9YW53 1432 aa33.37■■■□□ 2.93
RUNX1-205ENST00000399240 OVOS2Q6IE36 1432 aa33.37■■■□□ 2.93
RUNX1-205ENST00000399240 DIEXFQ68CQ4 756 aaKnown RBP33.37■■■□□ 2.93
RUNX1-205ENST00000399240 NSD2O96028 1365 aa33.37■■■□□ 2.93
RUNX1-205ENST00000399240 USP31Q70CQ4 1352 aa33.36■■■□□ 2.93
RUNX1-205ENST00000399240 LRRC59Q96AG4 307 aaKnown RBP33.35■■■□□ 2.93
RUNX1-205ENST00000399240 NLRP6P59044 892 aa33.34■■■□□ 2.93
RUNX1-205ENST00000399240 CRYBG1Q9Y4K1 1723 aa33.34■■■□□ 2.93
RUNX1-205ENST00000399240 ARHGEF10O15013 1369 aa33.33■■■□□ 2.93
RUNX1-205ENST00000399240 HSPA1LP34931 641 aa33.33■■■□□ 2.93
RUNX1-205ENST00000399240 MED1Q15648 1581 aaPredicted RBP33.32■■■□□ 2.92
RUNX1-205ENST00000399240 COG3Q96JB2 828 aa33.3■■■□□ 2.92
RUNX1-205ENST00000399240 COL22A1Q8NFW1 1626 aaPredicted RBP33.29■■■□□ 2.92
RUNX1-205ENST00000399240 PHRF1Q9P1Y6 1649 aaKnown RBP33.29■■■□□ 2.92
RUNX1-205ENST00000399240 NLRP13Q86W25 1043 aa33.29■■■□□ 2.92
RUNX1-205ENST00000399240 FBXO41Q8TF61 875 aa33.29■■■□□ 2.92
RUNX1-205ENST00000399240 ABCA3Q99758 1704 aa33.29■■■□□ 2.92
RUNX1-205ENST00000399240 PLEKHG5O94827 1062 aa33.28■■■□□ 2.92
RUNX1-205ENST00000399240 PNPLA6Q8IY17 1366 aa33.28■■■□□ 2.92
RUNX1-205ENST00000399240 PARD3Q8TEW0 1356 aa33.27■■■□□ 2.92
RUNX1-205ENST00000399240 SLIT3O75094 1523 aa33.27■■■□□ 2.92
RUNX1-205ENST00000399240 MORC1Q86VD1 984 aa33.26■■■□□ 2.92
RUNX1-205ENST00000399240 SHPRHQ149N8 1683 aa33.26■■■□□ 2.92
RUNX1-205ENST00000399240 USP19O94966 1318 aa33.26■■■□□ 2.92
RUNX1-205ENST00000399240 CABLES1Q8TDN4 633 aa33.25■■■□□ 2.91
RUNX1-205ENST00000399240 PRKRIP1Q9H875 184 aaPredicted RBP33.25■■■□□ 2.91
RUNX1-205ENST00000399240 FBLN1P23142 703 aa33.22■■■□□ 2.91
RUNX1-205ENST00000399240 TNNT2P45379 298 aaPredicted RBP33.22■■■□□ 2.91
RUNX1-205ENST00000399240 MAP2P11137 1827 aaKnown RBP33.21■■■□□ 2.91
RUNX1-205ENST00000399240 SOX12O15370 315 aa33.21■■■□□ 2.91
RUNX1-205ENST00000399240 NFAT5O94916 1531 aa33.2■■■□□ 2.91
RUNX1-205ENST00000399240 ANP32CO43423 234 aa33.2■■■□□ 2.91
RUNX1-205ENST00000399240 JCADQ9P266 1359 aa33.19■■■□□ 2.9
RUNX1-205ENST00000399240 RALBP1Q15311 655 aa33.18■■■□□ 2.9
RUNX1-205ENST00000399240 GCP02774 474 aa33.17■■■□□ 2.9
RUNX1-205ENST00000399240 LTN1O94822 1766 aa33.16■■■□□ 2.9
RUNX1-205ENST00000399240 KCNH5Q8NCM2 988 aa33.13■■■□□ 2.89
RUNX1-205ENST00000399240 AATKQ6ZMQ8 1374 aa33.13■■■□□ 2.89
RUNX1-205ENST00000399240 PPP2R1AP30153 589 aa33.11■■■□□ 2.89
RUNX1-205ENST00000399240 RRS1Q15050 365 aaKnown RBP33.11■■■□□ 2.89
RUNX1-205ENST00000399240 PEAK1Q9H792 1746 aa33.09■■■□□ 2.89
RUNX1-205ENST00000399240 MYBBP1AQ9BQG0 1328 aaKnown RBP33.08■■■□□ 2.89
RUNX1-205ENST00000399240 HAP1P54257 671 aaPredicted RBP33.08■■■□□ 2.89
RUNX1-205ENST00000399240 ZC3H6P61129 1189 aaKnown RBP33.08■■■□□ 2.89
RUNX1-205ENST00000399240 POLKQ9UBT6 870 aa33.08■■■□□ 2.89
RUNX1-205ENST00000399240 EMILIN1Q9Y6C2 1016 aa33.08■■■□□ 2.89
RUNX1-205ENST00000399240 MAP3K19Q56UN5 1328 aa33.07■■■□□ 2.88
RUNX1-205ENST00000399240 ARHGEF25Q86VW2 580 aa33.04■■■□□ 2.88
RUNX1-205ENST00000399240 MIER1Q8N108 512 aa33.04■■■□□ 2.88
RUNX1-205ENST00000399240 SMG6Q86US8 1419 aaKnown RBP33.04■■■□□ 2.88
RUNX1-205ENST00000399240 NUTM2BA6NNL0 878 aaPredicted RBP33.04■■■□□ 2.88
RUNX1-205ENST00000399240 NUTM2EB1AL46 878 aaPredicted RBP33.04■■■□□ 2.88
RUNX1-205ENST00000399240 NUTM2AQ8IVF1 878 aaPredicted RBP33.04■■■□□ 2.88
RUNX1-205ENST00000399240 KIAA0232Q92628 1395 aa33.04■■■□□ 2.88
RUNX1-205ENST00000399240 CPDO75976 1380 aa33.03■■■□□ 2.88
RUNX1-205ENST00000399240 MTHFSP49914 203 aa33.03■■■□□ 2.88
RUNX1-205ENST00000399240 SPATA31A6Q5VVP1 1343 aa33.03■■■□□ 2.88
RUNX1-205ENST00000399240 COL18A1P39060 1754 aa33.02■■■□□ 2.88
RUNX1-205ENST00000399240 LRP6O75581 1613 aa33.02■■■□□ 2.88
RUNX1-205ENST00000399240 ZBTB7CA1YPR0 619 aa33.01■■■□□ 2.88
RUNX1-205ENST00000399240 RGPD5Q99666 1765 aa33.01■■■□□ 2.88
RUNX1-205ENST00000399240 PPM1GO15355 546 aaPredicted RBP33■■■□□ 2.87
RUNX1-205ENST00000399240 CDK12Q9NYV4 1490 aaPredicted RBP32.97■■■□□ 2.87
RUNX1-205ENST00000399240 ADAMTS2O95450 1211 aa32.97■■■□□ 2.87
RUNX1-205ENST00000399240 CHRNA2Q15822 529 aa32.97■■■□□ 2.87
RUNX1-205ENST00000399240 PRDM11Q9NQV5 511 aa32.96■■■□□ 2.87
RUNX1-205ENST00000399240 LMO7Q8WWI1 1683 aa32.96■■■□□ 2.87
RUNX1-205ENST00000399240 AMPHP49418 695 aa32.96■■■□□ 2.87
RUNX1-205ENST00000399240 CCDC184Q52MB2 194 aa32.95■■■□□ 2.86
RUNX1-205ENST00000399240 FLT4P35916 1363 aa32.95■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms