RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 MORC1Q86VD1 984 aa26.35■■□□□ 1.81
PDLIM2-205ENST00000397761 C1orf167Q5SNV9 1468 aa26.35■■□□□ 1.81
PDLIM2-205ENST00000397761 MAP2P11137 1827 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-205ENST00000397761 PMFBP1Q8TBY8 1022 aa26.32■■□□□ 1.8
PDLIM2-205ENST00000397761 PHF8Q9UPP1 1060 aa26.32■■□□□ 1.8
PDLIM2-205ENST00000397761 MSH6P52701 1360 aa26.31■■□□□ 1.8
PDLIM2-205ENST00000397761 PIK3C2AO00443 1686 aa26.31■■□□□ 1.8
PDLIM2-205ENST00000397761 PNISRQ8TF01 805 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-205ENST00000397761 GGNBP2Q9H3C7 697 aa26.31■■□□□ 1.8
PDLIM2-205ENST00000397761 TTC21BQ7Z4L5 1316 aa26.31■■□□□ 1.8
PDLIM2-205ENST00000397761 MARF1Q9Y4F3 1742 aaKnown RBP26.3■■□□□ 1.8
PDLIM2-205ENST00000397761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.3■■□□□ 1.8
PDLIM2-205ENST00000397761 NGDNQ8NEJ9 315 aaKnown RBP26.3■■□□□ 1.8
PDLIM2-205ENST00000397761 TTC21AQ8NDW8 1320 aa26.29■■□□□ 1.8
PDLIM2-205ENST00000397761 CADPS2Q86UW7 1296 aa26.29■■□□□ 1.8
PDLIM2-205ENST00000397761 SCAF1Q9H7N4 1312 aaKnown RBP26.28■■□□□ 1.8
PDLIM2-205ENST00000397761 ATF3P18847 181 aa26.28■■□□□ 1.8
PDLIM2-205ENST00000397761 TRPM3Q9HCF6 1732 aaPredicted RBP26.27■■□□□ 1.8
PDLIM2-205ENST00000397761 NME9Q86XW9 330 aa26.27■■□□□ 1.8
PDLIM2-205ENST00000397761 OVOS2A0A0J9YW53 1432 aa26.27■■□□□ 1.8
PDLIM2-205ENST00000397761 OVOS2Q6IE36 1432 aa26.27■■□□□ 1.8
PDLIM2-205ENST00000397761 YTHDC1Q96MU7 727 aaKnown RBP26.26■■□□□ 1.79
PDLIM2-205ENST00000397761 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
PDLIM2-205ENST00000397761 ESCO1Q5FWF5 840 aa26.25■■□□□ 1.79
PDLIM2-205ENST00000397761 USP31Q70CQ4 1352 aa26.24■■□□□ 1.79
PDLIM2-205ENST00000397761 INSRP06213 1382 aa26.23■■□□□ 1.79
PDLIM2-205ENST00000397761 ORAI2Q96SN7 254 aa26.23■■□□□ 1.79
PDLIM2-205ENST00000397761 AATKQ6ZMQ8 1374 aa26.22■■□□□ 1.79
PDLIM2-205ENST00000397761 FAM9BQ8IZU0 186 aa26.21■■□□□ 1.79
PDLIM2-205ENST00000397761 SMG6Q86US8 1419 aaKnown RBP26.2■■□□□ 1.79
PDLIM2-205ENST00000397761 TNNT2P45379 298 aaPredicted RBP26.19■■□□□ 1.78
PDLIM2-205ENST00000397761 COG3Q96JB2 828 aa26.19■■□□□ 1.78
PDLIM2-205ENST00000397761 ZRANB1Q9UGI0 708 aa26.19■■□□□ 1.78
PDLIM2-205ENST00000397761 ALS2Q96Q42 1657 aa26.17■■□□□ 1.78
PDLIM2-205ENST00000397761 COL3A1P02461 1466 aaPredicted RBP26.17■■□□□ 1.78
PDLIM2-205ENST00000397761 MTHFSP49914 203 aa26.17■■□□□ 1.78
PDLIM2-205ENST00000397761 PNPLA6Q8IY17 1366 aa26.15■■□□□ 1.78
PDLIM2-205ENST00000397761 PSME1Q06323 249 aa26.13■■□□□ 1.77
PDLIM2-205ENST00000397761 BLMP54132 1417 aaPredicted RBP26.13■■□□□ 1.77
PDLIM2-205ENST00000397761 UBAP1LF5GYI3 381 aa26.12■■□□□ 1.77
PDLIM2-205ENST00000397761 FOXO3O43524 673 aa26.12■■□□□ 1.77
PDLIM2-205ENST00000397761 CDK12Q9NYV4 1490 aaPredicted RBP26.12■■□□□ 1.77
PDLIM2-205ENST00000397761 POLKQ9UBT6 870 aa26.11■■□□□ 1.77
PDLIM2-205ENST00000397761 PXDNQ92626 1479 aa26.1■■□□□ 1.77
PDLIM2-205ENST00000397761 NHSL1Q5SYE7 1610 aa26.1■■□□□ 1.77
PDLIM2-205ENST00000397761 CFAP53Q96M91 514 aa26.1■■□□□ 1.77
PDLIM2-205ENST00000397761 SLAIN2Q9P270 581 aa26.1■■□□□ 1.77
PDLIM2-205ENST00000397761 PEAK1Q9H792 1746 aa26.09■■□□□ 1.77
PDLIM2-205ENST00000397761 BRINP3Q76B58 766 aa26.07■■□□□ 1.76
PDLIM2-205ENST00000397761 KRT28Q7Z3Y7 464 aa26.07■■□□□ 1.76
PDLIM2-205ENST00000397761 ABTB2Q8N961 1025 aa26.07■■□□□ 1.76
PDLIM2-205ENST00000397761 NPHP3Q7Z494 1330 aa26.07■■□□□ 1.76
PDLIM2-205ENST00000397761 SBNO1A3KN83 1393 aa26.07■■□□□ 1.76
PDLIM2-205ENST00000397761 LTN1O94822 1766 aa26.07■■□□□ 1.76
PDLIM2-205ENST00000397761 CENPBP07199 599 aaPredicted RBP26.06■■□□□ 1.76
PDLIM2-205ENST00000397761 SLIT3O75094 1523 aa26.06■■□□□ 1.76
PDLIM2-205ENST00000397761 PHRF1Q9P1Y6 1649 aaKnown RBP26.06■■□□□ 1.76
PDLIM2-205ENST00000397761 NFAT5O94916 1531 aa26.05■■□□□ 1.76
PDLIM2-205ENST00000397761 NLRP6P59044 892 aa26.05■■□□□ 1.76
PDLIM2-205ENST00000397761 HNRNPUQ00839 825 aaKnown RBP eCLIP26.05■■□□□ 1.76
PDLIM2-205ENST00000397761 WDR43Q15061 677 aaKnown RBP eCLIP26.05■■□□□ 1.76
PDLIM2-205ENST00000397761 ADAMTS8Q9UP79 889 aa26.05■■□□□ 1.76
PDLIM2-205ENST00000397761 PAK3O75914 559 aaPredicted RBP26.04■■□□□ 1.76
PDLIM2-205ENST00000397761 FBLN1P23142 703 aa26.04■■□□□ 1.76
PDLIM2-205ENST00000397761 CRYBG1Q9Y4K1 1723 aa26.04■■□□□ 1.76
PDLIM2-205ENST00000397761 TOM1O60784 492 aa26.03■■□□□ 1.76
PDLIM2-205ENST00000397761 EMILIN1Q9Y6C2 1016 aa26.02■■□□□ 1.76
PDLIM2-205ENST00000397761 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
PDLIM2-205ENST00000397761 KIF24Q5T7B8 1368 aa26■■□□□ 1.75
PDLIM2-205ENST00000397761 ZBED9Q6R2W3 1325 aa26■■□□□ 1.75
PDLIM2-205ENST00000397761 TNS3Q68CZ2 1445 aa25.99■■□□□ 1.75
PDLIM2-205ENST00000397761 USP19O94966 1318 aa25.99■■□□□ 1.75
PDLIM2-205ENST00000397761 ROBO1Q9Y6N7 1651 aa25.99■■□□□ 1.75
PDLIM2-205ENST00000397761 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
PDLIM2-205ENST00000397761 RRS1Q15050 365 aaKnown RBP25.98■■□□□ 1.75
PDLIM2-205ENST00000397761 RGPD1P0DJD0 1748 aa25.97■■□□□ 1.75
PDLIM2-205ENST00000397761 SOS2Q07890 1332 aaPredicted RBP25.97■■□□□ 1.75
PDLIM2-205ENST00000397761 NUTM2GQ5VZR2 741 aa25.97■■□□□ 1.75
PDLIM2-205ENST00000397761 MAP3K19Q56UN5 1328 aa25.96■■□□□ 1.75
PDLIM2-205ENST00000397761 DIAPH1O60610 1272 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-205ENST00000397761 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-205ENST00000397761 SPATA31A3Q5VYP0 1347 aa25.94■■□□□ 1.74
PDLIM2-205ENST00000397761 AHDC1Q5TGY3 1603 aaPredicted RBP25.94■■□□□ 1.74
PDLIM2-205ENST00000397761 NUDCQ9Y266 331 aa25.94■■□□□ 1.74
PDLIM2-205ENST00000397761 FLT4P35916 1363 aa25.94■■□□□ 1.74
PDLIM2-205ENST00000397761 PIP4K2BP78356 416 aa25.93■■□□□ 1.74
PDLIM2-205ENST00000397761 KCNH5Q8NCM2 988 aa25.93■■□□□ 1.74
PDLIM2-205ENST00000397761 PPM1GO15355 546 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-205ENST00000397761 RTL1A6NKG5 1358 aa25.92■■□□□ 1.74
PDLIM2-205ENST00000397761 ARHGEF10O15013 1369 aa25.92■■□□□ 1.74
PDLIM2-205ENST00000397761 IL13P35225 146 aa25.91■■□□□ 1.74
PDLIM2-205ENST00000397761 ABCA3Q99758 1704 aa25.91■■□□□ 1.74
PDLIM2-205ENST00000397761 SOX12O15370 315 aa25.87■■□□□ 1.73
PDLIM2-205ENST00000397761 GCP02774 474 aa25.87■■□□□ 1.73
PDLIM2-205ENST00000397761 U2AF1L5P0DN76 240 aaPredicted RBP25.87■■□□□ 1.73
PDLIM2-205ENST00000397761 U2AF1Q01081 240 aaKnown RBP eCLIP25.87■■□□□ 1.73
PDLIM2-205ENST00000397761 COL18A1P39060 1754 aa25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 RGPD5Q99666 1765 aa25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 HSP90AB2PQ58FF8 381 aa25.85■■□□□ 1.73
PDLIM2-205ENST00000397761 RUNDC1Q96C34 613 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms