RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
SMCO1-201ENST00000397537 MAGEC2Q9UBF1 373 aaPredicted RBP9.2□□□□□ -0.94
SMCO1-201ENST00000397537 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 SCNN1AP37088 669 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 FAM50AQ14320 339 aaKnown RBP9.19□□□□□ -0.94
SMCO1-201ENST00000397537 RTL5Q5HYW3 569 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-201ENST00000397537 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 NOVA2Q9UNW9 492 aaKnown RBP9.19□□□□□ -0.94
SMCO1-201ENST00000397537 FAN1Q9Y2M0 1017 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 CLCN6P51797 869 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 RALBP1Q15311 655 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 FAM161AQ3B820 660 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 SMC5Q8IY18 1101 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
SMCO1-201ENST00000397537 BAZ1BQ9UIG0 1483 aaKnown RBP9.19□□□□□ -0.94
SMCO1-201ENST00000397537 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
SMCO1-201ENST00000397537 SPTLC1O15269 473 aa9.18□□□□□ -0.94
SMCO1-201ENST00000397537 LILRB3O75022 631 aa9.18□□□□□ -0.94
SMCO1-201ENST00000397537 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
SMCO1-201ENST00000397537 TRIM34Q9BYJ4 488 aa9.18□□□□□ -0.94
SMCO1-201ENST00000397537 HMX1Q9NP08 348 aaPredicted RBP9.18□□□□□ -0.94
SMCO1-201ENST00000397537 CHPF2Q9P2E5 772 aa9.18□□□□□ -0.94
SMCO1-201ENST00000397537 IQSEC3Q9UPP2 1182 aaPredicted RBP9.18□□□□□ -0.94
SMCO1-201ENST00000397537 LAS1LQ9Y4W2 734 aaKnown RBP9.18□□□□□ -0.94
SMCO1-201ENST00000397537 ATP9BO43861 1147 aa9.17□□□□□ -0.94
SMCO1-201ENST00000397537 GTF2F1P35269 517 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMCO1-201ENST00000397537 PMM1Q92871 262 aa9.17□□□□□ -0.94
SMCO1-201ENST00000397537 MRPL58Q14197 206 aaKnown RBP9.17□□□□□ -0.94
SMCO1-201ENST00000397537 FOXD4L6Q3SYB3 417 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-201ENST00000397537 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-201ENST00000397537 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
SMCO1-201ENST00000397537 RSBN1LQ6PCB5 846 aaPredicted RBP9.16□□□□□ -0.94
SMCO1-201ENST00000397537 NOP58Q9Y2X3 529 aaKnown RBP9.16□□□□□ -0.94
SMCO1-201ENST00000397537 ATP2B1P20020 1258 aa9.15□□□□□ -0.94
SMCO1-201ENST00000397537 FAM69CQ0P6D2 419 aa9.15□□□□□ -0.94
SMCO1-201ENST00000397537 METTL16Q86W50 562 aaKnown RBP9.15□□□□□ -0.95
SMCO1-201ENST00000397537 TMTC2Q8N394 836 aa9.15□□□□□ -0.95
SMCO1-201ENST00000397537 PPFIA4O75335 1185 aa9.14□□□□□ -0.95
SMCO1-201ENST00000397537 NT5DC4Q86YG4 428 aa9.14□□□□□ -0.95
SMCO1-201ENST00000397537 PLPP6Q8IY26 295 aa9.14□□□□□ -0.95
SMCO1-201ENST00000397537 GABBR1Q9UBS5 961 aa9.14□□□□□ -0.95
SMCO1-201ENST00000397537 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
SMCO1-201ENST00000397537 IBSPP21815 317 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-201ENST00000397537 NME8Q8N427 588 aa9.13□□□□□ -0.95
SMCO1-201ENST00000397537 SLC43A3Q8NBI5 491 aa9.13□□□□□ -0.95
SMCO1-201ENST00000397537 PKNOX2Q96KN3 472 aa9.13□□□□□ -0.95
SMCO1-201ENST00000397537 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
SMCO1-201ENST00000397537 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
SMCO1-201ENST00000397537 SOX11P35716 441 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 HSP90AB2PQ58FF8 381 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 JAZF1Q86VZ6 243 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 BRINP2Q9C0B6 783 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 UBA5Q9GZZ9 404 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 ZSWIM4Q9H7M6 989 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 CEP164Q9UPV0 1460 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 KDM4FA0A1W2PPD8 638 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 CREB3O43889 395 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 CLP1Q92989 425 aaKnown RBP9.12□□□□□ -0.95
SMCO1-201ENST00000397537 ARMC5Q96C12 935 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 SMARCA4P51532 1647 aa9.12□□□□□ -0.95
SMCO1-201ENST00000397537 ASB16Q96NS5 453 aa9.11□□□□□ -0.95
SMCO1-201ENST00000397537 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
SMCO1-201ENST00000397537 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
SMCO1-201ENST00000397537 NAP1L5Q96NT1 182 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-201ENST00000397537 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
SMCO1-201ENST00000397537 PPP1R3GB7ZBB8 358 aa9.1□□□□□ -0.95
SMCO1-201ENST00000397537 EIF3JO75822 258 aaKnown RBP9.1□□□□□ -0.95
SMCO1-201ENST00000397537 ZNF746Q6NUN9 644 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-201ENST00000397537 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
SMCO1-201ENST00000397537 CAPN10Q9HC96 672 aa9.1□□□□□ -0.95
SMCO1-201ENST00000397537 DMGDHQ9UI17 866 aaKnown RBP9.1□□□□□ -0.95
SMCO1-201ENST00000397537 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
SMCO1-201ENST00000397537 ATP2B4P23634 1241 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 MAPK1P28482 360 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 RBL2Q08999 1139 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 GPATCH11Q8N954 259 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 CABLES1Q8TDN4 633 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 PXYLP1Q8TE99 480 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 UPF1Q92900 1129 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMCO1-201ENST00000397537 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 COL4A3BPQ9Y5P4 624 aa9.09□□□□□ -0.95
SMCO1-201ENST00000397537 PLEKHG6Q3KR16 790 aa9.08□□□□□ -0.96
SMCO1-201ENST00000397537 CRTC2Q53ET0 693 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-201ENST00000397537 FBXO41Q8TF61 875 aa9.08□□□□□ -0.96
SMCO1-201ENST00000397537 TRPC6Q9Y210 931 aa9.08□□□□□ -0.96
SMCO1-201ENST00000397537 NDUFV2P19404 249 aa9.08□□□□□ -0.96
SMCO1-201ENST00000397537 EAPPQ56P03 285 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-201ENST00000397537 RPUSD2Q8IZ73 545 aaKnown RBP9.08□□□□□ -0.96
SMCO1-201ENST00000397537 TMC2Q8TDI7 906 aa9.08□□□□□ -0.96
SMCO1-201ENST00000397537 LMTK3Q96Q04 1460 aa9.07□□□□□ -0.96
SMCO1-201ENST00000397537 OATP04181 439 aa9.07□□□□□ -0.96
SMCO1-201ENST00000397537 PTMSP20962 102 aa9.07□□□□□ -0.96
SMCO1-201ENST00000397537 ZCRB1Q8TBF4 217 aaKnown RBP9.07□□□□□ -0.96
SMCO1-201ENST00000397537 OTUD5Q96G74 571 aa9.07□□□□□ -0.96
SMCO1-201ENST00000397537 IRF2BPLQ9H1B7 796 aa9.07□□□□□ -0.96
SMCO1-201ENST00000397537 NUTM2BA6NNL0 878 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-201ENST00000397537 NUTM2EB1AL46 878 aaPredicted RBP9.06□□□□□ -0.96
SMCO1-201ENST00000397537 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms