RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 EDC4Q6P2E9 1401 aaKnown RBP32.43■■■□□ 2.78
TSPAN4-203ENST00000397397 PXDNQ92626 1479 aa32.43■■■□□ 2.78
TSPAN4-203ENST00000397397 NRKQ7Z2Y5 1582 aa32.42■■■□□ 2.78
TSPAN4-203ENST00000397397 BRD4O60885 1362 aaPredicted RBP32.41■■■□□ 2.78
TSPAN4-203ENST00000397397 PAK3O75914 559 aaPredicted RBP32.4■■■□□ 2.78
TSPAN4-203ENST00000397397 SOS2Q07890 1332 aaPredicted RBP32.4■■■□□ 2.78
TSPAN4-203ENST00000397397 SSH2Q76I76 1423 aa32.4■■■□□ 2.78
TSPAN4-203ENST00000397397 TTC21BQ7Z4L5 1316 aa32.4■■■□□ 2.78
TSPAN4-203ENST00000397397 TRPM3Q9HCF6 1732 aaPredicted RBP32.4■■■□□ 2.78
TSPAN4-203ENST00000397397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.39■■■□□ 2.78
TSPAN4-203ENST00000397397 KNSTRNQ9Y448 316 aa32.39■■■□□ 2.78
TSPAN4-203ENST00000397397 SBNO1A3KN83 1393 aa32.37■■■□□ 2.77
TSPAN4-203ENST00000397397 PER1O15534 1290 aaPredicted RBP32.36■■■□□ 2.77
TSPAN4-203ENST00000397397 TTC21AQ8NDW8 1320 aa32.36■■■□□ 2.77
TSPAN4-203ENST00000397397 CGNL1Q0VF96 1302 aa32.32■■■□□ 2.76
TSPAN4-203ENST00000397397 KIF20BQ96Q89 1820 aa32.32■■■□□ 2.76
TSPAN4-203ENST00000397397 JCADQ9P266 1359 aa32.32■■■□□ 2.76
TSPAN4-203ENST00000397397 TNS3Q68CZ2 1445 aa32.31■■■□□ 2.76
TSPAN4-203ENST00000397397 LMOD2Q6P5Q4 547 aa32.31■■■□□ 2.76
TSPAN4-203ENST00000397397 SPATA31A3Q5VYP0 1347 aa32.3■■■□□ 2.76
TSPAN4-203ENST00000397397 ILDR2Q71H61 639 aa32.3■■■□□ 2.76
TSPAN4-203ENST00000397397 NME9Q86XW9 330 aa32.3■■■□□ 2.76
TSPAN4-203ENST00000397397 ALS2Q96Q42 1657 aa32.3■■■□□ 2.76
TSPAN4-203ENST00000397397 ABTB2Q8N961 1025 aa32.29■■■□□ 2.76
TSPAN4-203ENST00000397397 PIK3C2AO00443 1686 aa32.29■■■□□ 2.76
TSPAN4-203ENST00000397397 LRRC59Q96AG4 307 aaKnown RBP32.28■■■□□ 2.76
TSPAN4-203ENST00000397397 FYB1O15117 783 aa32.27■■■□□ 2.76
TSPAN4-203ENST00000397397 AMER1Q5JTC6 1135 aaPredicted RBP32.27■■■□□ 2.76
TSPAN4-203ENST00000397397 NUTM2GQ5VZR2 741 aa32.26■■■□□ 2.75
TSPAN4-203ENST00000397397 ZRANB1Q9UGI0 708 aa32.26■■■□□ 2.75
TSPAN4-203ENST00000397397 GGNBP2Q9H3C7 697 aa32.25■■■□□ 2.75
TSPAN4-203ENST00000397397 ARHGEF10O15013 1369 aa32.24■■■□□ 2.75
TSPAN4-203ENST00000397397 CNGB1Q14028 1251 aaPredicted RBP32.24■■■□□ 2.75
TSPAN4-203ENST00000397397 NLRP6P59044 892 aa32.23■■■□□ 2.75
TSPAN4-203ENST00000397397 CC2D1BQ5T0F9 858 aaKnown RBP32.23■■■□□ 2.75
TSPAN4-203ENST00000397397 SHPRHQ149N8 1683 aa32.22■■■□□ 2.75
TSPAN4-203ENST00000397397 NSD2O96028 1365 aa32.22■■■□□ 2.75
TSPAN4-203ENST00000397397 PHF23Q9BUL5 403 aaPredicted RBP32.21■■■□□ 2.75
TSPAN4-203ENST00000397397 USP31Q70CQ4 1352 aa32.21■■■□□ 2.75
TSPAN4-203ENST00000397397 NPC1L1Q9UHC9 1359 aa32.21■■■□□ 2.75
TSPAN4-203ENST00000397397 NLRP13Q86W25 1043 aa32.2■■■□□ 2.75
TSPAN4-203ENST00000397397 COG3Q96JB2 828 aa32.2■■■□□ 2.75
TSPAN4-203ENST00000397397 ANKRD26Q9UPS8 1709 aa32.2■■■□□ 2.75
TSPAN4-203ENST00000397397 PLEKHG5O94827 1062 aa32.18■■■□□ 2.74
TSPAN4-203ENST00000397397 OVOS2A0A0J9YW53 1432 aa32.17■■■□□ 2.74
TSPAN4-203ENST00000397397 OVOS2Q6IE36 1432 aa32.17■■■□□ 2.74
TSPAN4-203ENST00000397397 LRP6O75581 1613 aa32.17■■■□□ 2.74
TSPAN4-203ENST00000397397 USP54Q70EL1 1684 aa32.17■■■□□ 2.74
TSPAN4-203ENST00000397397 MARF1Q9Y4F3 1742 aaKnown RBP32.17■■■□□ 2.74
TSPAN4-203ENST00000397397 PNPLA6Q8IY17 1366 aa32.16■■■□□ 2.74
TSPAN4-203ENST00000397397 SPATA31A6Q5VVP1 1343 aa32.15■■■□□ 2.74
TSPAN4-203ENST00000397397 MORC1Q86VD1 984 aa32.15■■■□□ 2.74
TSPAN4-203ENST00000397397 RGS17Q9UGC6 210 aaPredicted RBP32.15■■■□□ 2.74
TSPAN4-203ENST00000397397 DIEXFQ68CQ4 756 aaKnown RBP32.13■■■□□ 2.73
TSPAN4-203ENST00000397397 COL22A1Q8NFW1 1626 aaPredicted RBP32.12■■■□□ 2.73
TSPAN4-203ENST00000397397 USP19O94966 1318 aa32.11■■■□□ 2.73
TSPAN4-203ENST00000397397 CABLES1Q8TDN4 633 aa32.1■■■□□ 2.73
TSPAN4-203ENST00000397397 CRYBG1Q9Y4K1 1723 aa32.09■■■□□ 2.73
TSPAN4-203ENST00000397397 PHRF1Q9P1Y6 1649 aaKnown RBP32.09■■■□□ 2.73
TSPAN4-203ENST00000397397 SLIT3O75094 1523 aa32.08■■■□□ 2.73
TSPAN4-203ENST00000397397 SOX12O15370 315 aa32.08■■■□□ 2.73
TSPAN4-203ENST00000397397 ABCA3Q99758 1704 aa32.07■■■□□ 2.72
TSPAN4-203ENST00000397397 NUTM2BA6NNL0 878 aaPredicted RBP32.07■■■□□ 2.72
TSPAN4-203ENST00000397397 NUTM2EB1AL46 878 aaPredicted RBP32.07■■■□□ 2.72
TSPAN4-203ENST00000397397 TNNT2P45379 298 aaPredicted RBP32.07■■■□□ 2.72
TSPAN4-203ENST00000397397 NUTM2AQ8IVF1 878 aaPredicted RBP32.07■■■□□ 2.72
TSPAN4-203ENST00000397397 HAP1P54257 671 aaPredicted RBP32.06■■■□□ 2.72
TSPAN4-203ENST00000397397 KCNH5Q8NCM2 988 aa32.06■■■□□ 2.72
TSPAN4-203ENST00000397397 ANP32CO43423 234 aa32.05■■■□□ 2.72
TSPAN4-203ENST00000397397 PARD3Q8TEW0 1356 aa32.04■■■□□ 2.72
TSPAN4-203ENST00000397397 GCP02774 474 aa32.04■■■□□ 2.72
TSPAN4-203ENST00000397397 RALBP1Q15311 655 aa32.03■■■□□ 2.72
TSPAN4-203ENST00000397397 PRKRIP1Q9H875 184 aaPredicted RBP32.02■■■□□ 2.72
TSPAN4-203ENST00000397397 FBLN1P23142 703 aa32.01■■■□□ 2.72
TSPAN4-203ENST00000397397 MEX3CQ5U5Q3 659 aaKnown RBP32.01■■■□□ 2.72
TSPAN4-203ENST00000397397 NFAT5O94916 1531 aa32.01■■■□□ 2.71
TSPAN4-203ENST00000397397 POTEAQ6S8J7 498 aa31.98■■■□□ 2.71
TSPAN4-203ENST00000397397 AATKQ6ZMQ8 1374 aa31.98■■■□□ 2.71
TSPAN4-203ENST00000397397 MAP2P11137 1827 aaKnown RBP31.97■■■□□ 2.71
TSPAN4-203ENST00000397397 ZC3H6P61129 1189 aaKnown RBP31.96■■■□□ 2.71
TSPAN4-203ENST00000397397 ZBTB7CA1YPR0 619 aa31.95■■■□□ 2.71
TSPAN4-203ENST00000397397 RRS1Q15050 365 aaKnown RBP31.95■■■□□ 2.71
TSPAN4-203ENST00000397397 LTN1O94822 1766 aa31.94■■■□□ 2.7
TSPAN4-203ENST00000397397 PPP2R1AP30153 589 aa31.93■■■□□ 2.7
TSPAN4-203ENST00000397397 MAP3K19Q56UN5 1328 aa31.92■■■□□ 2.7
TSPAN4-203ENST00000397397 ARHGEF25Q86VW2 580 aa31.92■■■□□ 2.7
TSPAN4-203ENST00000397397 KIAA0232Q92628 1395 aa31.91■■■□□ 2.7
TSPAN4-203ENST00000397397 MYBBP1AQ9BQG0 1328 aaKnown RBP31.91■■■□□ 2.7
TSPAN4-203ENST00000397397 POLKQ9UBT6 870 aa31.91■■■□□ 2.7
TSPAN4-203ENST00000397397 EMILIN1Q9Y6C2 1016 aa31.91■■■□□ 2.7
TSPAN4-203ENST00000397397 CPDO75976 1380 aa31.9■■■□□ 2.7
TSPAN4-203ENST00000397397 ADAMTS2O95450 1211 aa31.9■■■□□ 2.7
TSPAN4-203ENST00000397397 PPM1GO15355 546 aaPredicted RBP31.89■■■□□ 2.7
TSPAN4-203ENST00000397397 PRDM11Q9NQV5 511 aa31.88■■■□□ 2.69
TSPAN4-203ENST00000397397 AMPHP49418 695 aa31.87■■■□□ 2.69
TSPAN4-203ENST00000397397 MTHFSP49914 203 aa31.87■■■□□ 2.69
TSPAN4-203ENST00000397397 C8orf37Q96NL8 207 aa31.87■■■□□ 2.69
TSPAN4-203ENST00000397397 SOCS7O14512 581 aa31.86■■■□□ 2.69
TSPAN4-203ENST00000397397 SMG6Q86US8 1419 aaKnown RBP31.85■■■□□ 2.69
TSPAN4-203ENST00000397397 CHRNA2Q15822 529 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms