RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 POGKQ9P215 609 aa20.03■□□□□ 0.8
SEC13-205ENST00000397101 THSD7AQ9UPZ6 1657 aa20.01■□□□□ 0.79
SEC13-205ENST00000397101 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
SEC13-205ENST00000397101 SAFB2Q14151 953 aaKnown RBP eCLIP20.01■□□□□ 0.79
SEC13-205ENST00000397101 ADGRB1O14514 1584 aa20■□□□□ 0.79
SEC13-205ENST00000397101 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
SEC13-205ENST00000397101 TULP4Q9NRJ4 1543 aa19.99■□□□□ 0.79
SEC13-205ENST00000397101 R3HDM1Q15032 1099 aaKnown RBP19.98■□□□□ 0.79
SEC13-205ENST00000397101 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
SEC13-205ENST00000397101 FAM196AQ6ZSG2 479 aa19.97■□□□□ 0.79
SEC13-205ENST00000397101 TNS1Q9HBL0 1735 aaKnown RBP19.96■□□□□ 0.79
SEC13-205ENST00000397101 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
SEC13-205ENST00000397101 CAMKK2Q96RR4 588 aa19.96■□□□□ 0.79
SEC13-205ENST00000397101 SPATA31A1Q5TZJ5 1347 aa19.96■□□□□ 0.79
SEC13-205ENST00000397101 CRYBG1Q9Y4K1 1723 aa19.96■□□□□ 0.79
SEC13-205ENST00000397101 EZH2Q15910 746 aaKnown RBP19.95■□□□□ 0.78
SEC13-205ENST00000397101 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
SEC13-205ENST00000397101 FAM182BQ5T319 152 aa19.94■□□□□ 0.78
SEC13-205ENST00000397101 STAC3Q96MF2 364 aa19.94■□□□□ 0.78
SEC13-205ENST00000397101 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
SEC13-205ENST00000397101 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
SEC13-205ENST00000397101 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
SEC13-205ENST00000397101 MINK1Q8N4C8 1332 aaPredicted RBP19.91■□□□□ 0.78
SEC13-205ENST00000397101 KIAA0232Q92628 1395 aa19.91■□□□□ 0.78
SEC13-205ENST00000397101 ATP7BP35670 1465 aa19.91■□□□□ 0.78
SEC13-205ENST00000397101 TRIM37O94972 964 aa19.9■□□□□ 0.78
SEC13-205ENST00000397101 BARGINQ6ZT62 677 aa19.9■□□□□ 0.78
SEC13-205ENST00000397101 PAK3O75914 559 aaPredicted RBP19.89■□□□□ 0.77
SEC13-205ENST00000397101 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
SEC13-205ENST00000397101 APBA3O96018 575 aa19.87■□□□□ 0.77
SEC13-205ENST00000397101 ITSN1Q15811 1721 aa19.85■□□□□ 0.77
SEC13-205ENST00000397101 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
SEC13-205ENST00000397101 RREB1Q92766 1687 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 POLR3AO14802 1390 aaPredicted RBP19.84■□□□□ 0.77
SEC13-205ENST00000397101 PHRF1Q9P1Y6 1649 aaKnown RBP19.84■□□□□ 0.77
SEC13-205ENST00000397101 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
SEC13-205ENST00000397101 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 CHRNA2Q15822 529 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 NBPF8Q3BBV2 869 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 SSH2Q76I76 1423 aa19.84■□□□□ 0.77
SEC13-205ENST00000397101 THRAP3Q9Y2W1 955 aaKnown RBP19.83■□□□□ 0.77
SEC13-205ENST00000397101 CPDO75976 1380 aa19.83■□□□□ 0.76
SEC13-205ENST00000397101 EVA1CP58658 441 aa19.81■□□□□ 0.76
SEC13-205ENST00000397101 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
SEC13-205ENST00000397101 TCP11L2Q8N4U5 519 aa19.81■□□□□ 0.76
SEC13-205ENST00000397101 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
SEC13-205ENST00000397101 YY1P25490 414 aa19.8■□□□□ 0.76
SEC13-205ENST00000397101 DCAF11Q8TEB1 546 aa19.8■□□□□ 0.76
SEC13-205ENST00000397101 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
SEC13-205ENST00000397101 NUP188Q5SRE5 1749 aa19.79■□□□□ 0.76
SEC13-205ENST00000397101 USP19O94966 1318 aa19.78■□□□□ 0.76
SEC13-205ENST00000397101 CAMTA1Q9Y6Y1 1673 aa19.78■□□□□ 0.76
SEC13-205ENST00000397101 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
SEC13-205ENST00000397101 ARHGEF28Q8N1W1 1705 aaKnown RBP19.78■□□□□ 0.76
SEC13-205ENST00000397101 ACEP12821 1306 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 LARP1Q6PKG0 1096 aaKnown RBP19.77■□□□□ 0.76
SEC13-205ENST00000397101 CDK19Q9BWU1 502 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 SPON1Q9HCB6 807 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 KDM2AQ9Y2K7 1162 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 NRKQ7Z2Y5 1582 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 LMO7Q8WWI1 1683 aa19.77■□□□□ 0.76
SEC13-205ENST00000397101 KCNQ2O43526 872 aa19.76■□□□□ 0.75
SEC13-205ENST00000397101 TOPAZ1Q8N9V7 1692 aa19.75■□□□□ 0.75
SEC13-205ENST00000397101 BRD4O60885 1362 aaPredicted RBP19.74■□□□□ 0.75
SEC13-205ENST00000397101 NUTM2GQ5VZR2 741 aa19.74■□□□□ 0.75
SEC13-205ENST00000397101 ABTB2Q8N961 1025 aa19.74■□□□□ 0.75
SEC13-205ENST00000397101 UTRNP46939 3433 aa19.74■□□□□ 0.75
SEC13-205ENST00000397101 PARP4Q9UKK3 1724 aaKnown RBP19.73■□□□□ 0.75
SEC13-205ENST00000397101 PLSCR1O15162 318 aa19.73■□□□□ 0.75
SEC13-205ENST00000397101 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
SEC13-205ENST00000397101 NLRP13Q86W25 1043 aa19.72■□□□□ 0.75
SEC13-205ENST00000397101 PPP1R1BQ9UD71 204 aaPredicted RBP19.72■□□□□ 0.75
SEC13-205ENST00000397101 COL5A2P05997 1499 aaPredicted RBP19.72■□□□□ 0.75
SEC13-205ENST00000397101 OVOS2A0A0G2JMS6 1433 aa19.71■□□□□ 0.75
SEC13-205ENST00000397101 OVOS2A0A0J9YW53 1432 aa19.71■□□□□ 0.75
SEC13-205ENST00000397101 OVOS2Q6IE36 1432 aa19.71■□□□□ 0.75
SEC13-205ENST00000397101 RGPD3A6NKT7 1758 aaPredicted RBP19.71■□□□□ 0.75
SEC13-205ENST00000397101 RGPD4Q7Z3J3 1758 aa19.71■□□□□ 0.75
SEC13-205ENST00000397101 GCP02774 474 aa19.71■□□□□ 0.75
SEC13-205ENST00000397101 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
SEC13-205ENST00000397101 CRB1P82279 1406 aa19.7■□□□□ 0.74
SEC13-205ENST00000397101 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
SEC13-205ENST00000397101 BCL9O00512 1426 aa19.68■□□□□ 0.74
SEC13-205ENST00000397101 AATKQ6ZMQ8 1374 aa19.67■□□□□ 0.74
SEC13-205ENST00000397101 KIAA1210Q9ULL0 1709 aa19.65■□□□□ 0.74
SEC13-205ENST00000397101 BCL11BQ9C0K0 894 aaPredicted RBP19.65■□□□□ 0.74
SEC13-205ENST00000397101 DDB1Q16531 1140 aa19.64■□□□□ 0.73
SEC13-205ENST00000397101 PPIP5K1Q6PFW1 1433 aa19.64■□□□□ 0.73
SEC13-205ENST00000397101 CDCA7Q9BWT1 371 aaPredicted RBP19.63■□□□□ 0.73
SEC13-205ENST00000397101 SLIT3O75094 1523 aa19.62■□□□□ 0.73
SEC13-205ENST00000397101 ANO8Q9HCE9 1232 aaPredicted RBP19.62■□□□□ 0.73
SEC13-205ENST00000397101 CASZ1Q86V15 1759 aa19.62■□□□□ 0.73
SEC13-205ENST00000397101 LRRC37A3O60309 1634 aa19.61■□□□□ 0.73
SEC13-205ENST00000397101 SBF2Q86WG5 1849 aa19.6■□□□□ 0.73
SEC13-205ENST00000397101 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
SEC13-205ENST00000397101 USP6P35125 1406 aa19.59■□□□□ 0.73
SEC13-205ENST00000397101 PROM2Q8N271 834 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms