RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 COL14A1Q05707 1796 aaKnown RBP14.98□□□□□ -0.01
NUP98-205ENST00000397007 SMG6Q86US8 1419 aaKnown RBP14.97□□□□□ -0.01
NUP98-205ENST00000397007 HIRIP3Q9BW71 556 aaPredicted RBP14.97□□□□□ -0.01
NUP98-205ENST00000397007 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
NUP98-205ENST00000397007 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
NUP98-205ENST00000397007 USP19O94966 1318 aa14.97□□□□□ -0.01
NUP98-205ENST00000397007 PNPLA6Q8IY17 1366 aa14.97□□□□□ -0.01
NUP98-205ENST00000397007 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
NUP98-205ENST00000397007 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.02
NUP98-205ENST00000397007 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.02
NUP98-205ENST00000397007 TOM1O60784 492 aa14.96□□□□□ -0.02
NUP98-205ENST00000397007 ATF3P18847 181 aa14.95□□□□□ -0.02
NUP98-205ENST00000397007 TMF1P82094 1093 aa14.95□□□□□ -0.02
NUP98-205ENST00000397007 SAFB2Q14151 953 aaKnown RBP eCLIP14.94□□□□□ -0.02
NUP98-205ENST00000397007 SPATA31A3Q5VYP0 1347 aa14.94□□□□□ -0.02
NUP98-205ENST00000397007 CARD14Q9BXL6 1004 aa14.94□□□□□ -0.02
NUP98-205ENST00000397007 ACEP12821 1306 aa14.93□□□□□ -0.02
NUP98-205ENST00000397007 PHF8Q9UPP1 1060 aa14.93□□□□□ -0.02
NUP98-205ENST00000397007 SHANK3Q9BYB0 1731 aa14.9□□□□□ -0.02
NUP98-205ENST00000397007 NPHP3Q7Z494 1330 aa14.9□□□□□ -0.02
NUP98-205ENST00000397007 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
NUP98-205ENST00000397007 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
NUP98-205ENST00000397007 UBAP1LF5GYI3 381 aa14.89□□□□□ -0.03
NUP98-205ENST00000397007 NCAPD2Q15021 1401 aa14.88□□□□□ -0.03
NUP98-205ENST00000397007 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
NUP98-205ENST00000397007 SLC12A5Q9H2X9 1139 aa14.88□□□□□ -0.03
NUP98-205ENST00000397007 TTC21AQ8NDW8 1320 aa14.88□□□□□ -0.03
NUP98-205ENST00000397007 CPDO75976 1380 aa14.88□□□□□ -0.03
NUP98-205ENST00000397007 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
NUP98-205ENST00000397007 SLIT2O94813 1529 aa14.87□□□□□ -0.03
NUP98-205ENST00000397007 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
NUP98-205ENST00000397007 NSD2O96028 1365 aa14.87□□□□□ -0.03
NUP98-205ENST00000397007 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
NUP98-205ENST00000397007 THSD7AQ9UPZ6 1657 aa14.86□□□□□ -0.03
NUP98-205ENST00000397007 JCADQ9P266 1359 aa14.86□□□□□ -0.03
NUP98-205ENST00000397007 TTC21BQ7Z4L5 1316 aa14.86□□□□□ -0.03
NUP98-205ENST00000397007 DDX17Q92841 729 aaKnown RBP14.86□□□□□ -0.03
NUP98-205ENST00000397007 NSD3Q9BZ95 1437 aa14.86□□□□□ -0.03
NUP98-205ENST00000397007 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
NUP98-205ENST00000397007 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
NUP98-205ENST00000397007 AMER1Q5JTC6 1135 aaPredicted RBP14.85□□□□□ -0.03
NUP98-205ENST00000397007 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
NUP98-205ENST00000397007 HSPA1LP34931 641 aa14.85□□□□□ -0.03
NUP98-205ENST00000397007 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
NUP98-205ENST00000397007 AATKQ6ZMQ8 1374 aa14.84□□□□□ -0.03
NUP98-205ENST00000397007 PARP4Q9UKK3 1724 aaKnown RBP14.83□□□□□ -0.04
NUP98-205ENST00000397007 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
NUP98-205ENST00000397007 PKD1L3Q7Z443 1732 aa14.82□□□□□ -0.04
NUP98-205ENST00000397007 INSRP06213 1382 aa14.82□□□□□ -0.04
NUP98-205ENST00000397007 PARD3Q8TEW0 1356 aa14.82□□□□□ -0.04
NUP98-205ENST00000397007 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
NUP98-205ENST00000397007 SPATA31A6Q5VVP1 1343 aa14.81□□□□□ -0.04
NUP98-205ENST00000397007 FOXO3O43524 673 aa14.81□□□□□ -0.04
NUP98-205ENST00000397007 GLI3P10071 1580 aa14.8□□□□□ -0.04
NUP98-205ENST00000397007 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
NUP98-205ENST00000397007 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
NUP98-205ENST00000397007 FYB1O15117 783 aa14.8□□□□□ -0.04
NUP98-205ENST00000397007 ADAMTS7Q9UKP4 1686 aa14.8□□□□□ -0.04
NUP98-205ENST00000397007 KIF24Q5T7B8 1368 aa14.79□□□□□ -0.04
NUP98-205ENST00000397007 BCL9LQ86UU0 1499 aa14.79□□□□□ -0.04
NUP98-205ENST00000397007 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
NUP98-205ENST00000397007 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
NUP98-205ENST00000397007 CDK12Q9NYV4 1490 aaPredicted RBP14.78□□□□□ -0.04
NUP98-205ENST00000397007 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.04
NUP98-205ENST00000397007 PANK3Q9H999 370 aa14.77□□□□□ -0.05
NUP98-205ENST00000397007 PSME1Q06323 249 aa14.77□□□□□ -0.05
NUP98-205ENST00000397007 ILDR1Q86SU0 546 aaPredicted RBP14.77□□□□□ -0.05
NUP98-205ENST00000397007 LRRC37A3O60309 1634 aa14.76□□□□□ -0.05
NUP98-205ENST00000397007 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
NUP98-205ENST00000397007 COL5A2P05997 1499 aaPredicted RBP14.75□□□□□ -0.05
NUP98-205ENST00000397007 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
NUP98-205ENST00000397007 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
NUP98-205ENST00000397007 ATRNO75882 1429 aa14.74□□□□□ -0.05
NUP98-205ENST00000397007 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
NUP98-205ENST00000397007 NME9Q86XW9 330 aa14.73□□□□□ -0.05
NUP98-205ENST00000397007 BLMP54132 1417 aaPredicted RBP14.73□□□□□ -0.05
NUP98-205ENST00000397007 HDGFL2Q7Z4V5 671 aaPredicted RBP14.73□□□□□ -0.05
NUP98-205ENST00000397007 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
NUP98-205ENST00000397007 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.05
NUP98-205ENST00000397007 PLEKHG2Q9H7P9 1386 aa14.71□□□□□ -0.05
NUP98-205ENST00000397007 CGNL1Q0VF96 1302 aa14.71□□□□□ -0.05
NUP98-205ENST00000397007 DISP2A7MBM2 1401 aa14.71□□□□□ -0.05
NUP98-205ENST00000397007 XPCQ01831 940 aaPredicted RBP14.71□□□□□ -0.06
NUP98-205ENST00000397007 FNBP4Q8N3X1 1017 aaPredicted RBP14.71□□□□□ -0.06
NUP98-205ENST00000397007 SBF2Q86WG5 1849 aa14.71□□□□□ -0.06
NUP98-205ENST00000397007 ARHGEF25Q86VW2 580 aa14.7□□□□□ -0.06
NUP98-205ENST00000397007 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
NUP98-205ENST00000397007 RGS17Q9UGC6 210 aaPredicted RBP14.68□□□□□ -0.06
NUP98-205ENST00000397007 TOGARAM1Q9Y4F4 1720 aa14.67□□□□□ -0.06
NUP98-205ENST00000397007 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
NUP98-205ENST00000397007 GCP02774 474 aa14.66□□□□□ -0.06
NUP98-205ENST00000397007 TMC1Q8TDI8 760 aa14.65□□□□□ -0.06
NUP98-205ENST00000397007 DLG5Q8TDM6 1919 aa14.65□□□□□ -0.06
NUP98-205ENST00000397007 NLRP13Q86W25 1043 aa14.65□□□□□ -0.06
NUP98-205ENST00000397007 CICQ96RK0 1608 aaPredicted RBP14.65□□□□□ -0.06
NUP98-205ENST00000397007 RGPD3A6NKT7 1758 aaPredicted RBP14.65□□□□□ -0.06
NUP98-205ENST00000397007 RGPD4Q7Z3J3 1758 aa14.65□□□□□ -0.06
NUP98-205ENST00000397007 ABTB2Q8N961 1025 aa14.64□□□□□ -0.07
NUP98-205ENST00000397007 PAPPAQ13219 1627 aa14.64□□□□□ -0.07
NUP98-205ENST00000397007 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms