RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
GAPDH-204ENST00000396859 HAP1P54257 671 aaPredicted RBP18.93■□□□□ 0.62
GAPDH-204ENST00000396859 NUTM2BA6NNL0 878 aaPredicted RBP18.92■□□□□ 0.62
GAPDH-204ENST00000396859 NUTM2EB1AL46 878 aaPredicted RBP18.92■□□□□ 0.62
GAPDH-204ENST00000396859 NUTM2AQ8IVF1 878 aaPredicted RBP18.92■□□□□ 0.62
GAPDH-204ENST00000396859 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
GAPDH-204ENST00000396859 ANKRD36BQ8N2N9 1353 aa18.92■□□□□ 0.62
GAPDH-204ENST00000396859 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
GAPDH-204ENST00000396859 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
GAPDH-204ENST00000396859 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
GAPDH-204ENST00000396859 ALS2Q96Q42 1657 aa18.91■□□□□ 0.62
GAPDH-204ENST00000396859 A0A1W2PP64 1363 aa18.91■□□□□ 0.62
GAPDH-204ENST00000396859 MEX3CQ5U5Q3 659 aaKnown RBP18.9■□□□□ 0.62
GAPDH-204ENST00000396859 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
GAPDH-204ENST00000396859 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
GAPDH-204ENST00000396859 MYOM1P52179 1685 aa18.89■□□□□ 0.61
GAPDH-204ENST00000396859 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
GAPDH-204ENST00000396859 TTC21BQ7Z4L5 1316 aa18.89■□□□□ 0.61
GAPDH-204ENST00000396859 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
GAPDH-204ENST00000396859 NLRP13Q86W25 1043 aa18.88■□□□□ 0.61
GAPDH-204ENST00000396859 KIF7Q2M1P5 1343 aa18.88■□□□□ 0.61
GAPDH-204ENST00000396859 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
GAPDH-204ENST00000396859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
GAPDH-204ENST00000396859 SSH2Q76I76 1423 aa18.86■□□□□ 0.61
GAPDH-204ENST00000396859 NUTM2GQ5VZR2 741 aa18.86■□□□□ 0.61
GAPDH-204ENST00000396859 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
GAPDH-204ENST00000396859 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
GAPDH-204ENST00000396859 NLRP6P59044 892 aa18.85■□□□□ 0.61
GAPDH-204ENST00000396859 ADAMTS2O95450 1211 aa18.84■□□□□ 0.61
GAPDH-204ENST00000396859 CABLES1Q8TDN4 633 aa18.84■□□□□ 0.61
GAPDH-204ENST00000396859 LRP6O75581 1613 aa18.83■□□□□ 0.61
GAPDH-204ENST00000396859 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
GAPDH-204ENST00000396859 PIK3C2AO00443 1686 aa18.82■□□□□ 0.6
GAPDH-204ENST00000396859 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
GAPDH-204ENST00000396859 ABCA3Q99758 1704 aa18.81■□□□□ 0.6
GAPDH-204ENST00000396859 SOCS7O14512 581 aa18.81■□□□□ 0.6
GAPDH-204ENST00000396859 PANK3Q9H999 370 aa18.81■□□□□ 0.6
GAPDH-204ENST00000396859 NSD3Q9BZ95 1437 aa18.81■□□□□ 0.6
GAPDH-204ENST00000396859 NME9Q86XW9 330 aa18.8■□□□□ 0.6
GAPDH-204ENST00000396859 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
GAPDH-204ENST00000396859 USP19O94966 1318 aa18.79■□□□□ 0.6
GAPDH-204ENST00000396859 C8orf37Q96NL8 207 aa18.79■□□□□ 0.6
GAPDH-204ENST00000396859 CGNL1Q0VF96 1302 aa18.78■□□□□ 0.6
GAPDH-204ENST00000396859 MARF1Q9Y4F3 1742 aaKnown RBP18.78■□□□□ 0.6
GAPDH-204ENST00000396859 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
GAPDH-204ENST00000396859 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
GAPDH-204ENST00000396859 NGLY1Q96IV0 654 aa18.78■□□□□ 0.6
GAPDH-204ENST00000396859 COG3Q96JB2 828 aa18.78■□□□□ 0.6
GAPDH-204ENST00000396859 USP31Q70CQ4 1352 aa18.78■□□□□ 0.6
GAPDH-204ENST00000396859 GCP02774 474 aa18.77■□□□□ 0.6
GAPDH-204ENST00000396859 CARD14Q9BXL6 1004 aa18.77■□□□□ 0.6
GAPDH-204ENST00000396859 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.6
GAPDH-204ENST00000396859 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.59
GAPDH-204ENST00000396859 SLIT3O75094 1523 aa18.75■□□□□ 0.59
GAPDH-204ENST00000396859 PRDM11Q9NQV5 511 aa18.75■□□□□ 0.59
GAPDH-204ENST00000396859 USP54Q70EL1 1684 aa18.75■□□□□ 0.59
GAPDH-204ENST00000396859 FYB1O15117 783 aa18.74■□□□□ 0.59
GAPDH-204ENST00000396859 SOX12O15370 315 aa18.74■□□□□ 0.59
GAPDH-204ENST00000396859 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
GAPDH-204ENST00000396859 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
GAPDH-204ENST00000396859 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
GAPDH-204ENST00000396859 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
GAPDH-204ENST00000396859 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
GAPDH-204ENST00000396859 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
GAPDH-204ENST00000396859 AFF2P51816 1311 aa18.73■□□□□ 0.59
GAPDH-204ENST00000396859 ZNF772Q68DY9 489 aaPredicted RBP18.72■□□□□ 0.59
GAPDH-204ENST00000396859 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
GAPDH-204ENST00000396859 COL14A1Q05707 1796 aaKnown RBP18.71■□□□□ 0.59
GAPDH-204ENST00000396859 CPDO75976 1380 aa18.7■□□□□ 0.58
GAPDH-204ENST00000396859 NSD2O96028 1365 aa18.7■□□□□ 0.58
GAPDH-204ENST00000396859 USP21Q9UK80 565 aa18.7■□□□□ 0.58
GAPDH-204ENST00000396859 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
GAPDH-204ENST00000396859 FNBP4Q8N3X1 1017 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-204ENST00000396859 CHRNA2Q15822 529 aa18.68■□□□□ 0.58
GAPDH-204ENST00000396859 PLCH1Q4KWH8 1693 aa18.68■□□□□ 0.58
GAPDH-204ENST00000396859 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
GAPDH-204ENST00000396859 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
GAPDH-204ENST00000396859 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
GAPDH-204ENST00000396859 NFAT5O94916 1531 aa18.67■□□□□ 0.58
GAPDH-204ENST00000396859 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
GAPDH-204ENST00000396859 SLIT2O94813 1529 aa18.66■□□□□ 0.58
GAPDH-204ENST00000396859 ARHGEF25Q86VW2 580 aa18.66■□□□□ 0.58
GAPDH-204ENST00000396859 UNC5CLQ8IV45 518 aa18.65■□□□□ 0.58
GAPDH-204ENST00000396859 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
GAPDH-204ENST00000396859 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
GAPDH-204ENST00000396859 EVA1CP58658 441 aa18.64■□□□□ 0.57
GAPDH-204ENST00000396859 MORC1Q86VD1 984 aa18.64■□□□□ 0.57
GAPDH-204ENST00000396859 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
GAPDH-204ENST00000396859 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
GAPDH-204ENST00000396859 QTRT2Q9H974 415 aaKnown RBP18.63■□□□□ 0.57
GAPDH-204ENST00000396859 LTN1O94822 1766 aa18.63■□□□□ 0.57
GAPDH-204ENST00000396859 AMPHP49418 695 aa18.62■□□□□ 0.57
GAPDH-204ENST00000396859 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
GAPDH-204ENST00000396859 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
GAPDH-204ENST00000396859 RGS17Q9UGC6 210 aaPredicted RBP18.62■□□□□ 0.57
GAPDH-204ENST00000396859 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
GAPDH-204ENST00000396859 BCL9LQ86UU0 1499 aa18.62■□□□□ 0.57
GAPDH-204ENST00000396859 ABCC6O95255 1503 aa18.62■□□□□ 0.57
GAPDH-204ENST00000396859 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
GAPDH-204ENST00000396859 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms