RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
XRCC4-203ENST00000396027 UPP2O95045 317 aa5.56□□□□□ -1.52
XRCC4-203ENST00000396027 GCGRP47871 477 aa5.56□□□□□ -1.52
XRCC4-203ENST00000396027 FAM161AQ3B820 660 aa5.56□□□□□ -1.52
XRCC4-203ENST00000396027 GOLGA2P5Q9HBQ8 144 aa5.56□□□□□ -1.52
XRCC4-203ENST00000396027 ZEB1P37275 1124 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-203ENST00000396027 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
XRCC4-203ENST00000396027 BBXQ8WY36 941 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-203ENST00000396027 FURINP09958 794 aa5.54□□□□□ -1.52
XRCC4-203ENST00000396027 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.54□□□□□ -1.52
XRCC4-203ENST00000396027 C6orf118Q5T5N4 469 aa5.53□□□□□ -1.52
XRCC4-203ENST00000396027 LYPD4Q6UWN0 246 aa5.53□□□□□ -1.52
XRCC4-203ENST00000396027 RTN4Q9NQC3 1192 aaKnown RBP5.53□□□□□ -1.52
XRCC4-203ENST00000396027 SOS2Q07890 1332 aaPredicted RBP5.53□□□□□ -1.52
XRCC4-203ENST00000396027 ADAMTS2O95450 1211 aa5.53□□□□□ -1.52
XRCC4-203ENST00000396027 SULF1Q8IWU6 871 aa5.53□□□□□ -1.52
XRCC4-203ENST00000396027 BCL11AQ9H165 835 aa5.53□□□□□ -1.52
XRCC4-203ENST00000396027 CNTNAP5Q8WYK1 1306 aa5.52□□□□□ -1.53
XRCC4-203ENST00000396027 CELA2BP08218 269 aaPredicted RBP5.52□□□□□ -1.53
XRCC4-203ENST00000396027 BMP2P12643 396 aa5.52□□□□□ -1.53
XRCC4-203ENST00000396027 SRSF11Q05519 484 aaKnown RBP5.52□□□□□ -1.53
XRCC4-203ENST00000396027 KLF16Q9BXK1 252 aaPredicted RBP5.52□□□□□ -1.53
XRCC4-203ENST00000396027 DNMT3LQ9UJW3 386 aa5.52□□□□□ -1.53
XRCC4-203ENST00000396027 DDX11L8A8MPP1 907 aa5.51□□□□□ -1.53
XRCC4-203ENST00000396027 SV2AQ7L0J3 742 aa5.51□□□□□ -1.53
XRCC4-203ENST00000396027 ALYREFQ86V81 257 aaKnown RBP5.51□□□□□ -1.53
XRCC4-203ENST00000396027 VARSP26640 1264 aaKnown RBP5.5□□□□□ -1.53
XRCC4-203ENST00000396027 SH3BP2P78314 561 aa5.5□□□□□ -1.53
XRCC4-203ENST00000396027 PTSQ03393 145 aa5.5□□□□□ -1.53
XRCC4-203ENST00000396027 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
XRCC4-203ENST00000396027 METTL3Q86U44 580 aaKnown RBP5.5□□□□□ -1.53
XRCC4-203ENST00000396027 TLL2Q9Y6L7 1015 aa5.5□□□□□ -1.53
XRCC4-203ENST00000396027 LINC00528Q8N1L1 170 aa5.49□□□□□ -1.53
XRCC4-203ENST00000396027 ZIC2O95409 532 aaPredicted RBP5.48□□□□□ -1.53
XRCC4-203ENST00000396027 CCDC155Q8N6L0 562 aa5.48□□□□□ -1.53
XRCC4-203ENST00000396027 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.48□□□□□ -1.53
XRCC4-203ENST00000396027 NISCHQ9Y2I1 1504 aa5.48□□□□□ -1.53
XRCC4-203ENST00000396027 CLSPNQ9HAW4 1339 aa5.48□□□□□ -1.53
XRCC4-203ENST00000396027 JUNDP17535 347 aa5.48□□□□□ -1.53
XRCC4-203ENST00000396027 ZMYM1Q5SVZ6 1142 aa5.48□□□□□ -1.53
XRCC4-203ENST00000396027 EIF5BO60841 1220 aaKnown RBP5.47□□□□□ -1.53
XRCC4-203ENST00000396027 FCHSD2O94868 740 aa5.47□□□□□ -1.53
XRCC4-203ENST00000396027 RANGAP1P46060 587 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-203ENST00000396027 VWA5B2Q8N398 1253 aa5.47□□□□□ -1.53
XRCC4-203ENST00000396027 SPRYD3Q8NCJ5 442 aa5.47□□□□□ -1.53
XRCC4-203ENST00000396027 ITGA6P23229 1130 aa5.46□□□□□ -1.54
XRCC4-203ENST00000396027 NUDT12Q9BQG2 462 aa5.46□□□□□ -1.54
XRCC4-203ENST00000396027 WDR70Q9NW82 654 aa5.46□□□□□ -1.54
XRCC4-203ENST00000396027 CDC14CA4D256 554 aa5.45□□□□□ -1.54
XRCC4-203ENST00000396027 PTCRAQ6ISU1 281 aaPredicted RBP5.45□□□□□ -1.54
XRCC4-203ENST00000396027 MEIOBQ8N635 442 aa5.45□□□□□ -1.54
XRCC4-203ENST00000396027 NEDD1Q8NHV4 660 aa5.45□□□□□ -1.54
XRCC4-203ENST00000396027 SPTLC1O15269 473 aa5.44□□□□□ -1.54
XRCC4-203ENST00000396027 ZFAND3Q9H8U3 227 aa5.44□□□□□ -1.54
XRCC4-203ENST00000396027 NUTM2FA1L443 756 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 SLC35F4A4IF30 521 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 KRBA1A5PL33 1030 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 TTLL8A6PVC2 850 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 ITPKCQ96DU7 683 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 TSEN34Q9BSV6 310 aaKnown RBP5.43□□□□□ -1.54
XRCC4-203ENST00000396027 NR5A1Q13285 461 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 FAM174AQ8TBP5 190 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 LRRC4BQ9NT99 713 aa5.43□□□□□ -1.54
XRCC4-203ENST00000396027 SCO2A0A1W2PP80 73 aa5.42□□□□□ -1.54
XRCC4-203ENST00000396027 COBLO75128 1261 aa5.42□□□□□ -1.54
XRCC4-203ENST00000396027 BCRP11274 1271 aa5.42□□□□□ -1.54
XRCC4-203ENST00000396027 SH3RF1Q7Z6J0 888 aa5.41□□□□□ -1.54
XRCC4-203ENST00000396027 CDK15Q96Q40 435 aa5.41□□□□□ -1.54
XRCC4-203ENST00000396027 PAXIP1Q6ZW49 1069 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-203ENST00000396027 ARXQ96QS3 562 aa5.4□□□□□ -1.54
XRCC4-203ENST00000396027 CCNYL3P0C7X3 344 aa5.39□□□□□ -1.55
XRCC4-203ENST00000396027 ITGB7P26010 798 aa5.39□□□□□ -1.55
XRCC4-203ENST00000396027 USP46P62068 366 aa5.39□□□□□ -1.55
XRCC4-203ENST00000396027 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
XRCC4-203ENST00000396027 ZNF511Q8NB15 262 aa5.39□□□□□ -1.55
XRCC4-203ENST00000396027 ZFP64Q9NPA5 681 aa5.39□□□□□ -1.55
XRCC4-203ENST00000396027 MLLT3P42568 568 aaPredicted RBP5.38□□□□□ -1.55
XRCC4-203ENST00000396027 BAP1Q92560 729 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 UNC93B1Q9H1C4 597 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 SEMA6BQ9H3T3 888 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 CFAP44Q96MT7 982 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 ANP32EQ9BTT0 268 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 MBIPQ9NS73 344 aa5.38□□□□□ -1.55
XRCC4-203ENST00000396027 ACIN1Q9UKV3 1341 aaKnown RBP5.37□□□□□ -1.55
XRCC4-203ENST00000396027 HIC1Q14526 733 aa5.37□□□□□ -1.55
XRCC4-203ENST00000396027 ARTNQ5T4W7 220 aa5.37□□□□□ -1.55
XRCC4-203ENST00000396027 ERICH6BQ5W0A0 696 aa5.37□□□□□ -1.55
XRCC4-203ENST00000396027 FIGNL2A6NMB9 653 aa5.36□□□□□ -1.55
XRCC4-203ENST00000396027 KDM4AO75164 1064 aa5.36□□□□□ -1.55
XRCC4-203ENST00000396027 GAS6Q14393 721 aa5.36□□□□□ -1.55
XRCC4-203ENST00000396027 YBX3P16989 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
XRCC4-203ENST00000396027 RETREG3Q86VR2 466 aa5.35□□□□□ -1.55
XRCC4-203ENST00000396027 UBE2Q2Q8WVN8 375 aa5.35□□□□□ -1.55
XRCC4-203ENST00000396027 MKL2Q9ULH7 1088 aa5.35□□□□□ -1.55
XRCC4-203ENST00000396027 NR3C2P08235 984 aa5.34□□□□□ -1.55
XRCC4-203ENST00000396027 MS4A1P11836 297 aa5.34□□□□□ -1.55
XRCC4-203ENST00000396027 ARID5BQ14865 1188 aa5.34□□□□□ -1.55
XRCC4-203ENST00000396027 EVA1BQ9NVM1 165 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms