RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZBBXA8MT70 800 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 ATP9BO43861 1147 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 CSB-PGBD3P0DP91 1061 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 PNMA1Q8ND90 353 aa8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 GZF1Q9H116 711 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
HMGB1P10-201ENST00000395823 TMEM88BA6NKF7 163 aa8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 NR1I2O75469 434 aa8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 PDE4CQ08493 712 aa8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 FAM163AQ96GL9 167 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P10-201ENST00000395823 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 BRD1O95696 1058 aa8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 KANK4Q5T7N3 995 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 FAM160A2Q8N612 972 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
HMGB1P10-201ENST00000395823 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
HMGB1P10-201ENST00000395823 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
HMGB1P10-201ENST00000395823 MSS51Q4VC12 460 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 ANKRD13DQ6ZTN6 518 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 WNT2BQ93097 391 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
HMGB1P10-201ENST00000395823 GOLGA8CPA6NN73 597 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 KCNA1Q09470 495 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 TMCO4Q5TGY1 634 aa8.85□□□□□ -0.99
HMGB1P10-201ENST00000395823 CTHP32929 405 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 MMP16P51512 607 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 RGS22Q8NE09 1264 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
HMGB1P10-201ENST00000395823 USP17L3A6NCW0 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L4A6NCW7 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L5A8MUK1 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L2Q6R6M4 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 EVA1BQ9NVM1 165 aa8.83□□□□□ -1
HMGB1P10-201ENST00000395823 KCNH2Q12809 1159 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 STK32AQ8WU08 396 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 SPSB2Q99619 263 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
HMGB1P10-201ENST00000395823 TLL1O43897 1013 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 SKIP12755 728 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 MFAP1P55081 439 aaKnown RBP8.81□□□□□ -1
HMGB1P10-201ENST00000395823 COPS2P61201 443 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
HMGB1P10-201ENST00000395823 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 STAC3Q96MF2 364 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
HMGB1P10-201ENST00000395823 PHTF2Q8N3S3 785 aa8.8□□□□□ -1
HMGB1P10-201ENST00000395823 CEP126Q9P2H0 1117 aa8.8□□□□□ -1
HMGB1P10-201ENST00000395823 PATL2C9JE40 543 aaKnown RBP8.79□□□□□ -1
HMGB1P10-201ENST00000395823 TMEM164Q5U3C3 297 aa8.79□□□□□ -1
HMGB1P10-201ENST00000395823 THSD4Q6ZMP0 1018 aa8.79□□□□□ -1
HMGB1P10-201ENST00000395823 MTMR7Q9Y216 660 aa8.79□□□□□ -1
HMGB1P10-201ENST00000395823 PTK2Q05397 1052 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 CRTC2Q53ET0 693 aaPredicted RBP8.78□□□□□ -1
HMGB1P10-201ENST00000395823 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
HMGB1P10-201ENST00000395823 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
HMGB1P10-201ENST00000395823 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 PCDHB9Q9Y5E1 797 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 IVNS1ABPQ9Y6Y0 642 aa8.78□□□□□ -1
HMGB1P10-201ENST00000395823 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 ARMC2Q8NEN0 867 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 ADAM32Q8TC27 787 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1.01
HMGB1P10-201ENST00000395823 ADH1BP00325 375 aa8.76□□□□□ -1.01
HMGB1P10-201ENST00000395823 NCOA4Q13772 614 aa8.76□□□□□ -1.01
HMGB1P10-201ENST00000395823 FAM196BA6NMK8 535 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L21D6R901 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 ZPR1O75312 459 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 UNC93B1Q9H1C4 597 aa8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 MKRN1Q9UHC7 482 aaKnown RBP8.75□□□□□ -1.01
HMGB1P10-201ENST00000395823 POTEMA6NI47 508 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 PTK7Q13308 1070 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 TSGA10IPQ3SY00 556 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms