RNA–Protein interactions for RNA: ENST00000395569.8

MDK-204, Transcript of midkine, humanhuman

TSL 1 (best) BASIC

Gene MDK, Length 686 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-204ENST00000395569 KRT27Q7Z3Y8 459 aa30.06■■■□□ 2.4
MDK-204ENST00000395569 COL14A1Q05707 1796 aaKnown RBP30.05■■■□□ 2.4
MDK-204ENST00000395569 ATP7BP35670 1465 aa30.05■■■□□ 2.4
MDK-204ENST00000395569 NGDNQ8NEJ9 315 aaKnown RBP30.04■■■□□ 2.4
MDK-204ENST00000395569 NUDT16Q96DE0 195 aaKnown RBP30.03■■■□□ 2.4
MDK-204ENST00000395569 FAM98CQ17RN3 349 aaKnown RBP30.02■■■□□ 2.4
MDK-204ENST00000395569 PAK3O75914 559 aaPredicted RBP29.99■■■□□ 2.39
MDK-204ENST00000395569 SPATA31A5Q5VU36 1347 aa29.97■■■□□ 2.39
MDK-204ENST00000395569 SPATA31A7Q8IWB4 1347 aa29.97■■■□□ 2.39
MDK-204ENST00000395569 CDK19Q9BWU1 502 aa29.97■■■□□ 2.39
MDK-204ENST00000395569 ITSN1Q15811 1721 aa29.96■■■□□ 2.39
MDK-204ENST00000395569 SF3B2Q13435 895 aaKnown RBP29.94■■■□□ 2.38
MDK-204ENST00000395569 TOPAZ1Q8N9V7 1692 aa29.94■■■□□ 2.38
MDK-204ENST00000395569 POLR3AO14802 1390 aaPredicted RBP29.93■■■□□ 2.38
MDK-204ENST00000395569 NBPF1Q3BBV0 1214 aa29.93■■■□□ 2.38
MDK-204ENST00000395569 KIAA1210Q9ULL0 1709 aa29.93■■■□□ 2.38
MDK-204ENST00000395569 THSD7AQ9UPZ6 1657 aa29.92■■■□□ 2.38
MDK-204ENST00000395569 PHRF1Q9P1Y6 1649 aaKnown RBP29.92■■■□□ 2.38
MDK-204ENST00000395569 KIAA0232Q92628 1395 aa29.91■■■□□ 2.38
MDK-204ENST00000395569 A0A0G2JS52 829 aa29.91■■■□□ 2.38
MDK-204ENST00000395569 MYT1Q01538 1121 aa29.91■■■□□ 2.38
MDK-204ENST00000395569 FAM182BQ5T319 152 aa29.91■■■□□ 2.38
MDK-204ENST00000395569 PRDM11Q9NQV5 511 aa29.91■■■□□ 2.38
MDK-204ENST00000395569 NBPF8Q3BBV2 869 aa29.9■■■□□ 2.38
MDK-204ENST00000395569 ACEP12821 1306 aa29.9■■■□□ 2.38
MDK-204ENST00000395569 PLEKHG3A1L390 1219 aa29.89■■■□□ 2.38
MDK-204ENST00000395569 CHRNA2Q15822 529 aa29.89■■■□□ 2.38
MDK-204ENST00000395569 NUTM2GQ5VZR2 741 aa29.88■■■□□ 2.37
MDK-204ENST00000395569 CCDC61Q9Y6R9 512 aa29.88■■■□□ 2.37
MDK-204ENST00000395569 SPATA31A1Q5TZJ5 1347 aa29.87■■■□□ 2.37
MDK-204ENST00000395569 ZC3H6P61129 1189 aaKnown RBP29.85■■■□□ 2.37
MDK-204ENST00000395569 BAG6P46379 1132 aa29.83■■■□□ 2.37
MDK-204ENST00000395569 EN1Q05925 392 aaPredicted RBP29.81■■■□□ 2.36
MDK-204ENST00000395569 RGPD1P0DJD0 1748 aa29.8■■■□□ 2.36
MDK-204ENST00000395569 STRN4Q9NRL3 753 aa29.8■■■□□ 2.36
MDK-204ENST00000395569 NRKQ7Z2Y5 1582 aa29.8■■■□□ 2.36
MDK-204ENST00000395569 CAMTA1Q9Y6Y1 1673 aa29.79■■■□□ 2.36
MDK-204ENST00000395569 PSDA5PKW4 1024 aaPredicted RBP29.78■■■□□ 2.36
MDK-204ENST00000395569 TNS1Q9HBL0 1735 aaKnown RBP29.78■■■□□ 2.36
MDK-204ENST00000395569 USP19O94966 1318 aa29.77■■■□□ 2.36
MDK-204ENST00000395569 DISP2A7MBM2 1401 aa29.77■■■□□ 2.36
MDK-204ENST00000395569 LRP5O75197 1615 aa29.76■■■□□ 2.35
MDK-204ENST00000395569 ABTB2Q8N961 1025 aa29.76■■■□□ 2.35
MDK-204ENST00000395569 SSH2Q76I76 1423 aa29.76■■■□□ 2.35
MDK-204ENST00000395569 LMO7Q8WWI1 1683 aa29.76■■■□□ 2.35
MDK-204ENST00000395569 PPIP5K1Q6PFW1 1433 aa29.75■■■□□ 2.35
MDK-204ENST00000395569 CABP2Q9NPB3 220 aa29.75■■■□□ 2.35
MDK-204ENST00000395569 CENPJQ9HC77 1338 aaPredicted RBP29.74■■■□□ 2.35
MDK-204ENST00000395569 CPDO75976 1380 aa29.74■■■□□ 2.35
MDK-204ENST00000395569 SRPK2P78362 688 aaKnown RBP29.72■■■□□ 2.35
MDK-204ENST00000395569 LARP1Q6PKG0 1096 aaKnown RBP29.72■■■□□ 2.35
MDK-204ENST00000395569 BARGINQ6ZT62 677 aa29.72■■■□□ 2.35
MDK-204ENST00000395569 USP35Q9P2H5 1018 aa29.71■■■□□ 2.35
MDK-204ENST00000395569 GCP02774 474 aa29.7■■■□□ 2.35
MDK-204ENST00000395569 EZH2Q15910 746 aaKnown RBP29.7■■■□□ 2.35
MDK-204ENST00000395569 TRIM37O94972 964 aa29.69■■■□□ 2.34
MDK-204ENST00000395569 EVA1CP58658 441 aa29.69■■■□□ 2.34
MDK-204ENST00000395569 FAM196AQ6ZSG2 479 aa29.69■■■□□ 2.34
MDK-204ENST00000395569 L3MBTL2Q969R5 705 aa29.69■■■□□ 2.34
MDK-204ENST00000395569 CAMKK2Q96RR4 588 aa29.69■■■□□ 2.34
MDK-204ENST00000395569 QRICH2Q9H0J4 1663 aa29.69■■■□□ 2.34
MDK-204ENST00000395569 NLRP13Q86W25 1043 aa29.67■■■□□ 2.34
MDK-204ENST00000395569 CABP1Q9NZU7 370 aa29.66■■■□□ 2.34
MDK-204ENST00000395569 R3HDM1Q15032 1099 aaKnown RBP29.64■■■□□ 2.34
MDK-204ENST00000395569 TCP11L2Q8N4U5 519 aa29.64■■■□□ 2.34
MDK-204ENST00000395569 BRD4O60885 1362 aaPredicted RBP29.64■■■□□ 2.33
MDK-204ENST00000395569 USP6P35125 1406 aa29.63■■■□□ 2.33
MDK-204ENST00000395569 SIN3AQ96ST3 1273 aa29.63■■■□□ 2.33
MDK-204ENST00000395569 COL5A2P05997 1499 aaPredicted RBP29.62■■■□□ 2.33
MDK-204ENST00000395569 TRPM1Q7Z4N2 1603 aa29.6■■■□□ 2.33
MDK-204ENST00000395569 SLIT3O75094 1523 aa29.6■■■□□ 2.33
MDK-204ENST00000395569 APBA3O96018 575 aa29.59■■■□□ 2.33
MDK-204ENST00000395569 PDE3BQ13370 1112 aa29.59■■■□□ 2.33
MDK-204ENST00000395569 THRAP3Q9Y2W1 955 aaKnown RBP29.59■■■□□ 2.33
MDK-204ENST00000395569 NLRP6P59044 892 aa29.57■■■□□ 2.32
MDK-204ENST00000395569 PIK3C2AO00443 1686 aa29.56■■■□□ 2.32
MDK-204ENST00000395569 COL18A1P39060 1754 aa29.56■■■□□ 2.32
MDK-204ENST00000395569 PARP4Q9UKK3 1724 aaKnown RBP29.56■■■□□ 2.32
MDK-204ENST00000395569 AATKQ6ZMQ8 1374 aa29.55■■■□□ 2.32
MDK-204ENST00000395569 RREB1Q92766 1687 aa29.55■■■□□ 2.32
MDK-204ENST00000395569 CRB1P82279 1406 aa29.54■■■□□ 2.32
MDK-204ENST00000395569 PARD3Q8TEW0 1356 aa29.53■■■□□ 2.32
MDK-204ENST00000395569 EVC2Q86UK5 1308 aa29.52■■■□□ 2.32
MDK-204ENST00000395569 AXIN2Q9Y2T1 843 aa29.52■■■□□ 2.32
MDK-204ENST00000395569 NUP188Q5SRE5 1749 aa29.51■■■□□ 2.31
MDK-204ENST00000395569 PEAK1Q9H792 1746 aa29.51■■■□□ 2.31
MDK-204ENST00000395569 ZBTB7CA1YPR0 619 aa29.5■■■□□ 2.31
MDK-204ENST00000395569 TTC21BQ7Z4L5 1316 aa29.48■■■□□ 2.31
MDK-204ENST00000395569 NEUROD1Q13562 356 aa29.47■■■□□ 2.31
MDK-204ENST00000395569 ROCK2O75116 1388 aaKnown RBP29.47■■■□□ 2.31
MDK-204ENST00000395569 AKAP12Q02952 1782 aa29.47■■■□□ 2.31
MDK-204ENST00000395569 LRRC37A3O60309 1634 aa29.45■■■□□ 2.31
MDK-204ENST00000395569 ARHGEF25Q86VW2 580 aa29.45■■■□□ 2.31
MDK-204ENST00000395569 ZNF692Q9BU19 519 aaPredicted RBP29.45■■■□□ 2.31
MDK-204ENST00000395569 CPSF1Q10570 1443 aaKnown RBP29.45■■■□□ 2.3
MDK-204ENST00000395569 TOM1L2Q6ZVM7 507 aa29.42■■■□□ 2.3
MDK-204ENST00000395569 WDR17Q8IZU2 1322 aa29.42■■■□□ 2.3
MDK-204ENST00000395569 SBF2Q86WG5 1849 aa29.41■■■□□ 2.3
MDK-204ENST00000395569 PTF1AQ7RTS3 328 aa29.41■■■□□ 2.3
MDK-204ENST00000395569 RGPD5Q99666 1765 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms