RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 ERLIN2O94905 339 aa14.6□□□□□ -0.07
SIN3A-202ENST00000394947 TTC39AQ5SRH9 613 aa14.6□□□□□ -0.07
SIN3A-202ENST00000394947 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
SIN3A-202ENST00000394947 NUCB2P80303 420 aa14.6□□□□□ -0.07
SIN3A-202ENST00000394947 DNA2P51530 1060 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 NLRP2Q9NX02 1062 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
SIN3A-202ENST00000394947 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 UBTFL1P0CB47 393 aaPredicted RBP14.59□□□□□ -0.07
SIN3A-202ENST00000394947 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
SIN3A-202ENST00000394947 TRERF1Q96PN7 1200 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 TRAK2O60296 914 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 NF2P35240 595 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 CNTROBQ8N137 903 aa14.59□□□□□ -0.07
SIN3A-202ENST00000394947 SRRTQ9BXP5 876 aaKnown RBP14.58□□□□□ -0.07
SIN3A-202ENST00000394947 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.07
SIN3A-202ENST00000394947 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
SIN3A-202ENST00000394947 STRN4Q9NRL3 753 aa14.58□□□□□ -0.08
SIN3A-202ENST00000394947 STK38Q15208 465 aa14.58□□□□□ -0.08
SIN3A-202ENST00000394947 NEK4P51957 841 aa14.57□□□□□ -0.08
SIN3A-202ENST00000394947 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
SIN3A-202ENST00000394947 CCDC102AQ96A19 550 aa14.57□□□□□ -0.08
SIN3A-202ENST00000394947 GBP2P32456 591 aaPredicted RBP14.57□□□□□ -0.08
SIN3A-202ENST00000394947 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
SIN3A-202ENST00000394947 DYDC1Q8WWB3 177 aa14.57□□□□□ -0.08
SIN3A-202ENST00000394947 TXLNAP40222 546 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 NINLQ9Y2I6 1382 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 CCDC66A2RUB6 948 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 MPHOSPH10O00566 681 aaKnown RBP14.56□□□□□ -0.08
SIN3A-202ENST00000394947 PPFIBP1Q86W92 1011 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 CUX2O14529 1486 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 TNNT1P13805 278 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 ZBTB9Q96C00 473 aa14.56□□□□□ -0.08
SIN3A-202ENST00000394947 ZNHIT6Q9NWK9 470 aaKnown RBP14.56□□□□□ -0.08
SIN3A-202ENST00000394947 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
SIN3A-202ENST00000394947 SART3Q15020 963 aaKnown RBP14.55□□□□□ -0.08
SIN3A-202ENST00000394947 HSP90AB4PQ58FF6 505 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 USP5P45974 858 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 TBC1D2BQ9UPU7 963 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 UQCRHLA0A096LP55 91 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 UQCRHP07919 91 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 TRMT1LQ7Z2T5 733 aaKnown RBP14.55□□□□□ -0.08
SIN3A-202ENST00000394947 ANKRD18AQ8IVF6 992 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 ME1P48163 572 aa14.55□□□□□ -0.08
SIN3A-202ENST00000394947 BCCIPQ9P287 314 aaKnown RBP eCLIP14.55□□□□□ -0.08
SIN3A-202ENST00000394947 EVC2Q86UK5 1308 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 CCDC85AQ96PX6 553 aaPredicted RBP14.54□□□□□ -0.08
SIN3A-202ENST00000394947 NUTM2BA6NNL0 878 aaPredicted RBP14.54□□□□□ -0.08
SIN3A-202ENST00000394947 NUTM2EB1AL46 878 aaPredicted RBP14.54□□□□□ -0.08
SIN3A-202ENST00000394947 NUTM2AQ8IVF1 878 aaPredicted RBP14.54□□□□□ -0.08
SIN3A-202ENST00000394947 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 GOPCQ9HD26 462 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 PSMA5P28066 241 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 CCDC112Q8NEF3 446 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 CARMIL1Q5VZK9 1371 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 GGNBP2Q9H3C7 697 aa14.54□□□□□ -0.08
SIN3A-202ENST00000394947 MYL6BP14649 208 aa14.53□□□□□ -0.08
SIN3A-202ENST00000394947 ZSCAN29Q8IWY8 852 aaPredicted RBP14.53□□□□□ -0.08
SIN3A-202ENST00000394947 CDC45O75419 566 aa14.53□□□□□ -0.08
SIN3A-202ENST00000394947 DHX8Q14562 1220 aaKnown RBP14.53□□□□□ -0.08
SIN3A-202ENST00000394947 UBE4AQ14139 1066 aa14.53□□□□□ -0.08
SIN3A-202ENST00000394947 EFCAB2Q5VUJ9 269 aa14.53□□□□□ -0.08
SIN3A-202ENST00000394947 API5Q9BZZ5 524 aaKnown RBP14.53□□□□□ -0.08
SIN3A-202ENST00000394947 KIF6Q6ZMV9 814 aa14.53□□□□□ -0.08
SIN3A-202ENST00000394947 SOGA1O94964 1423 aa14.53□□□□□ -0.08
SIN3A-202ENST00000394947 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.08
SIN3A-202ENST00000394947 TNMDQ9H2S6 317 aa14.52□□□□□ -0.08
SIN3A-202ENST00000394947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.52□□□□□ -0.081e-6■■□□□ 14
SIN3A-202ENST00000394947 CAMK4Q16566 473 aa14.52□□□□□ -0.08
SIN3A-202ENST00000394947 CABP2Q9NPB3 220 aa14.52□□□□□ -0.08
SIN3A-202ENST00000394947 CFAP45Q9UL16 551 aa14.52□□□□□ -0.08
SIN3A-202ENST00000394947 CCDC69A6NI79 296 aa14.52□□□□□ -0.09
SIN3A-202ENST00000394947 GIMAP7Q8NHV1 300 aa14.52□□□□□ -0.09
SIN3A-202ENST00000394947 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.09
SIN3A-202ENST00000394947 BICDL1Q6ZP65 573 aa14.52□□□□□ -0.09
SIN3A-202ENST00000394947 EZRP15311 586 aaKnown RBP14.51□□□□□ -0.09
SIN3A-202ENST00000394947 FKBP4Q02790 459 aaKnown RBP eCLIP14.51□□□□□ -0.09
SIN3A-202ENST00000394947 LIG1P18858 919 aa14.51□□□□□ -0.09
SIN3A-202ENST00000394947 KIAA1328Q86T90 577 aa14.51□□□□□ -0.09
SIN3A-202ENST00000394947 MRE11P49959 708 aa14.5□□□□□ -0.09
SIN3A-202ENST00000394947 ROCK1Q13464 1354 aa14.5□□□□□ -0.09
SIN3A-202ENST00000394947 WDR78Q5VTH9 848 aa14.5□□□□□ -0.09
SIN3A-202ENST00000394947 GOLGA6L7A0A1B0GV03 622 aa14.5□□□□□ -0.09
SIN3A-202ENST00000394947 ZNF76P36508 570 aa14.5□□□□□ -0.09
SIN3A-202ENST00000394947 ZNF526Q8TF50 670 aaPredicted RBP14.49□□□□□ -0.09
SIN3A-202ENST00000394947 MAP2K1Q02750 393 aaPredicted RBP14.49□□□□□ -0.09
SIN3A-202ENST00000394947 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
SIN3A-202ENST00000394947 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
SIN3A-202ENST00000394947 GPATCH11Q8N954 259 aa14.49□□□□□ -0.09
SIN3A-202ENST00000394947 PODXL2Q9NZ53 605 aa14.49□□□□□ -0.09
SIN3A-202ENST00000394947 PHLDB1Q86UU1 1377 aa14.49□□□□□ -0.09
SIN3A-202ENST00000394947 FILIP1Q7Z7B0 1213 aa14.48□□□□□ -0.09
SIN3A-202ENST00000394947 CEP63Q96MT8 703 aa14.48□□□□□ -0.09
SIN3A-202ENST00000394947 ZNF396Q96N95 335 aaPredicted RBP14.48□□□□□ -0.09
SIN3A-202ENST00000394947 DDX54Q8TDD1 881 aaKnown RBP14.48□□□□□ -0.09
SIN3A-202ENST00000394947 CTNNBL1Q8WYA6 563 aaPredicted RBP14.48□□□□□ -0.09
SIN3A-202ENST00000394947 CBX1P83916 185 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms