RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 TULP4Q9NRJ4 1543 aa29.1■■■□□ 2.25
UPK3B-203ENST00000394849 ADGRB1O14514 1584 aa29.1■■■□□ 2.25
UPK3B-203ENST00000394849 EN1Q05925 392 aaPredicted RBP29.1■■■□□ 2.25
UPK3B-203ENST00000394849 NGDNQ8NEJ9 315 aaKnown RBP29.08■■■□□ 2.25
UPK3B-203ENST00000394849 TRAK1Q9UPV9 953 aa29.08■■■□□ 2.25
UPK3B-203ENST00000394849 THSD7AQ9UPZ6 1657 aa29.08■■■□□ 2.25
UPK3B-203ENST00000394849 WASLO00401 505 aaPredicted RBP29.07■■■□□ 2.24
UPK3B-203ENST00000394849 STAC3Q96MF2 364 aa29.07■■■□□ 2.24
UPK3B-203ENST00000394849 HIRIP3Q9BW71 556 aaPredicted RBP29.07■■■□□ 2.24
UPK3B-203ENST00000394849 PRDM11Q9NQV5 511 aa29.07■■■□□ 2.24
UPK3B-203ENST00000394849 MINK1Q8N4C8 1332 aaPredicted RBP29.05■■■□□ 2.24
UPK3B-203ENST00000394849 PRR36Q9H6K5 1346 aa29.05■■■□□ 2.24
UPK3B-203ENST00000394849 CRYBG1Q9Y4K1 1723 aa29.05■■■□□ 2.24
UPK3B-203ENST00000394849 PAK3O75914 559 aaPredicted RBP29.04■■■□□ 2.24
UPK3B-203ENST00000394849 FAM196AQ6ZSG2 479 aa29.03■■■□□ 2.24
UPK3B-203ENST00000394849 TNS1Q9HBL0 1735 aaKnown RBP29.03■■■□□ 2.24
UPK3B-203ENST00000394849 R3HDM1Q15032 1099 aaKnown RBP29.02■■■□□ 2.24
UPK3B-203ENST00000394849 PARD3Q8TEW0 1356 aa29.01■■■□□ 2.24
UPK3B-203ENST00000394849 ITSN1Q15811 1721 aa29.01■■■□□ 2.23
UPK3B-203ENST00000394849 FAM182BQ5T319 152 aa29.01■■■□□ 2.23
UPK3B-203ENST00000394849 SPATA31A1Q5TZJ5 1347 aa29■■■□□ 2.23
UPK3B-203ENST00000394849 KIAA0232Q92628 1395 aa28.97■■■□□ 2.23
UPK3B-203ENST00000394849 ATP7BP35670 1465 aa28.97■■■□□ 2.23
UPK3B-203ENST00000394849 EZH2Q15910 746 aaKnown RBP28.96■■■□□ 2.23
UPK3B-203ENST00000394849 CAMKK2Q96RR4 588 aa28.96■■■□□ 2.23
UPK3B-203ENST00000394849 TRIM37O94972 964 aa28.94■■■□□ 2.22
UPK3B-203ENST00000394849 DCAF11Q8TEB1 546 aa28.94■■■□□ 2.22
UPK3B-203ENST00000394849 BARGINQ6ZT62 677 aa28.92■■■□□ 2.22
UPK3B-203ENST00000394849 NUDT16Q96DE0 195 aaKnown RBP28.92■■■□□ 2.22
UPK3B-203ENST00000394849 STRN4Q9NRL3 753 aa28.92■■■□□ 2.22
UPK3B-203ENST00000394849 KDM2AQ9Y2K7 1162 aa28.92■■■□□ 2.22
UPK3B-203ENST00000394849 PHRF1Q9P1Y6 1649 aaKnown RBP28.91■■■□□ 2.22
UPK3B-203ENST00000394849 APBA3O96018 575 aa28.9■■■□□ 2.22
UPK3B-203ENST00000394849 EVA1CP58658 441 aa28.89■■■□□ 2.22
UPK3B-203ENST00000394849 PDE3BQ13370 1112 aa28.89■■■□□ 2.22
UPK3B-203ENST00000394849 CHRNA2Q15822 529 aa28.89■■■□□ 2.22
UPK3B-203ENST00000394849 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
UPK3B-203ENST00000394849 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
UPK3B-203ENST00000394849 ZC3H6P61129 1189 aaKnown RBP28.87■■■□□ 2.21
UPK3B-203ENST00000394849 POLR3AO14802 1390 aaPredicted RBP28.87■■■□□ 2.21
UPK3B-203ENST00000394849 C11orf95C9JLR9 678 aaPredicted RBP28.86■■■□□ 2.21
UPK3B-203ENST00000394849 NBPF8Q3BBV2 869 aa28.86■■■□□ 2.21
UPK3B-203ENST00000394849 NBPF14Q5TI25 921 aa28.86■■■□□ 2.21
UPK3B-203ENST00000394849 SSH2Q76I76 1423 aa28.85■■■□□ 2.21
UPK3B-203ENST00000394849 USP35Q9P2H5 1018 aa28.84■■■□□ 2.21
UPK3B-203ENST00000394849 CCDC61Q9Y6R9 512 aa28.84■■■□□ 2.21
UPK3B-203ENST00000394849 TCP11L2Q8N4U5 519 aa28.83■■■□□ 2.21
UPK3B-203ENST00000394849 CDK19Q9BWU1 502 aa28.83■■■□□ 2.21
UPK3B-203ENST00000394849 THRAP3Q9Y2W1 955 aaKnown RBP28.83■■■□□ 2.21
UPK3B-203ENST00000394849 RREB1Q92766 1687 aa28.83■■■□□ 2.21
UPK3B-203ENST00000394849 CPDO75976 1380 aa28.82■■■□□ 2.2
UPK3B-203ENST00000394849 ACEP12821 1306 aa28.81■■■□□ 2.2
UPK3B-203ENST00000394849 PLEKHG3A1L390 1219 aa28.81■■■□□ 2.2
UPK3B-203ENST00000394849 TOPAZ1Q8N9V7 1692 aa28.8■■■□□ 2.2
UPK3B-203ENST00000394849 NUTM2GQ5VZR2 741 aa28.79■■■□□ 2.2
UPK3B-203ENST00000394849 ABTB2Q8N961 1025 aa28.79■■■□□ 2.2
UPK3B-203ENST00000394849 NUP188Q5SRE5 1749 aa28.77■■■□□ 2.2
UPK3B-203ENST00000394849 CAMTA1Q9Y6Y1 1673 aa28.77■■■□□ 2.2
UPK3B-203ENST00000394849 NRKQ7Z2Y5 1582 aa28.77■■■□□ 2.2
UPK3B-203ENST00000394849 LARP1Q6PKG0 1096 aaKnown RBP28.77■■■□□ 2.2
UPK3B-203ENST00000394849 USP19O94966 1318 aa28.75■■■□□ 2.19
UPK3B-203ENST00000394849 LMO7Q8WWI1 1683 aa28.75■■■□□ 2.19
UPK3B-203ENST00000394849 NLRP13Q86W25 1043 aa28.75■■■□□ 2.19
UPK3B-203ENST00000394849 BRD4O60885 1362 aaPredicted RBP28.74■■■□□ 2.19
UPK3B-203ENST00000394849 SPON1Q9HCB6 807 aa28.73■■■□□ 2.19
UPK3B-203ENST00000394849 PARP4Q9UKK3 1724 aaKnown RBP28.72■■■□□ 2.19
UPK3B-203ENST00000394849 DCAF8L1A6NGE4 600 aa28.72■■■□□ 2.19
UPK3B-203ENST00000394849 KIAA1210Q9ULL0 1709 aa28.72■■■□□ 2.19
UPK3B-203ENST00000394849 YY1P25490 414 aa28.71■■■□□ 2.19
UPK3B-203ENST00000394849 GCP02774 474 aa28.7■■■□□ 2.18
UPK3B-203ENST00000394849 PPP1R1BQ9UD71 204 aaPredicted RBP28.7■■■□□ 2.18
UPK3B-203ENST00000394849 KCNQ2O43526 872 aa28.68■■■□□ 2.18
UPK3B-203ENST00000394849 COL5A2P05997 1499 aaPredicted RBP28.67■■■□□ 2.18
UPK3B-203ENST00000394849 NINLQ9Y2I6 1382 aa28.67■■■□□ 2.18
UPK3B-203ENST00000394849 CRB1P82279 1406 aa28.67■■■□□ 2.18
UPK3B-203ENST00000394849 RGPD3A6NKT7 1758 aaPredicted RBP28.66■■■□□ 2.18
UPK3B-203ENST00000394849 RGPD4Q7Z3J3 1758 aa28.66■■■□□ 2.18
UPK3B-203ENST00000394849 OVOS2A0A0G2JMS6 1433 aa28.66■■■□□ 2.18
UPK3B-203ENST00000394849 OVOS2A0A0J9YW53 1432 aa28.66■■■□□ 2.18
UPK3B-203ENST00000394849 OVOS2Q6IE36 1432 aa28.66■■■□□ 2.18
UPK3B-203ENST00000394849 PLSCR1O15162 318 aa28.65■■■□□ 2.18
UPK3B-203ENST00000394849 PPIP5K1Q6PFW1 1433 aa28.63■■■□□ 2.17
UPK3B-203ENST00000394849 SRPK2P78362 688 aaKnown RBP28.63■■■□□ 2.17
UPK3B-203ENST00000394849 AATKQ6ZMQ8 1374 aa28.62■■■□□ 2.17
UPK3B-203ENST00000394849 PEAK1Q9H792 1746 aa28.6■■■□□ 2.17
UPK3B-203ENST00000394849 DDB1Q16531 1140 aa28.59■■■□□ 2.17
UPK3B-203ENST00000394849 SBF2Q86WG5 1849 aa28.58■■■□□ 2.17
UPK3B-203ENST00000394849 CENPJQ9HC77 1338 aaPredicted RBP28.58■■■□□ 2.17
UPK3B-203ENST00000394849 CDCA7Q9BWT1 371 aaPredicted RBP28.57■■■□□ 2.16
UPK3B-203ENST00000394849 BCL11BQ9C0K0 894 aaPredicted RBP28.57■■■□□ 2.16
UPK3B-203ENST00000394849 NLRP6P59044 892 aa28.56■■■□□ 2.16
UPK3B-203ENST00000394849 LRRC37A3O60309 1634 aa28.54■■■□□ 2.16
UPK3B-203ENST00000394849 SLIT3O75094 1523 aa28.54■■■□□ 2.16
UPK3B-203ENST00000394849 USP6P35125 1406 aa28.54■■■□□ 2.16
UPK3B-203ENST00000394849 TOM1L2Q6ZVM7 507 aa28.54■■■□□ 2.16
UPK3B-203ENST00000394849 BCL9O00512 1426 aa28.53■■■□□ 2.16
UPK3B-203ENST00000394849 NBPF1Q3BBV0 1214 aa28.53■■■□□ 2.16
UPK3B-203ENST00000394849 CABP2Q9NPB3 220 aa28.53■■■□□ 2.16
UPK3B-203ENST00000394849 ZBTB7CA1YPR0 619 aa28.51■■■□□ 2.15
UPK3B-203ENST00000394849 WDR17Q8IZU2 1322 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms