RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 CHMP5Q9NZZ3 219 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 PTMSP20962 102 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 TMPOP42166 694 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 ALDH1L2Q3SY69 923 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 TMEM132EQ6IEE7 984 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 GGT6Q6P531 493 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 C22orf23Q9BZE7 217 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 SLC52A1Q9NWF4 448 aa12.68□□□□□ -0.38
UBE2D3-208ENST00000394803 COL3A1P02461 1466 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-208ENST00000394803 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-208ENST00000394803 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 BCL2L13Q9BXK5 485 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 CDC42BPGQ6DT37 1551 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
UBE2D3-208ENST00000394803 REREQ9P2R6 1566 aa12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 ITPRIPQ8IWB1 547 aa12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-208ENST00000394803 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
UBE2D3-208ENST00000394803 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
UBE2D3-208ENST00000394803 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-208ENST00000394803 TRIM27P14373 513 aa12.64□□□□□ -0.39
UBE2D3-208ENST00000394803 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-208ENST00000394803 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-208ENST00000394803 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
UBE2D3-208ENST00000394803 MCM4P33991 863 aa12.63□□□□□ -0.39
UBE2D3-208ENST00000394803 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
UBE2D3-208ENST00000394803 POGKQ9P215 609 aa12.63□□□□□ -0.39
UBE2D3-208ENST00000394803 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
UBE2D3-208ENST00000394803 PNPLA6Q8IY17 1366 aa12.63□□□□□ -0.39
UBE2D3-208ENST00000394803 FCHSD2O94868 740 aa12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 DIP2CQ9Y2E4 1556 aa12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 RIPK4P57078 832 aa12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
UBE2D3-208ENST00000394803 MFAP1P55081 439 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 SNX21Q969T3 373 aa12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 PTPRMP28827 1452 aa12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 NUCB1Q02818 461 aa12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 ARHGAP45Q92619 1136 aa12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-208ENST00000394803 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
UBE2D3-208ENST00000394803 DIP2BQ9P265 1576 aa12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 TMEM131LA2VDJ0 1609 aa12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 PREX1Q8TCU6 1659 aa12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 ATP7BP35670 1465 aa12.59□□□□□ -0.39
UBE2D3-208ENST00000394803 FYB1O15117 783 aa12.58□□□□□ -0.39
UBE2D3-208ENST00000394803 SKOR2Q2VWA4 1001 aaPredicted RBP12.58□□□□□ -0.39
UBE2D3-208ENST00000394803 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.39
UBE2D3-208ENST00000394803 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.39
UBE2D3-208ENST00000394803 GBP4Q96PP9 640 aa12.58□□□□□ -0.39
UBE2D3-208ENST00000394803 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.39
UBE2D3-208ENST00000394803 MRE11P49959 708 aa12.58□□□□□ -0.4
UBE2D3-208ENST00000394803 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
UBE2D3-208ENST00000394803 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
UBE2D3-208ENST00000394803 FSD2A1L4K1 749 aa12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 PIK3R4Q99570 1358 aa12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 KIF13AQ9H1H9 1805 aa12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
UBE2D3-208ENST00000394803 LRRC7Q96NW7 1537 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 TRAK2O60296 914 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 GNAI1P63096 354 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 IDI1Q13907 227 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 RICTORQ6R327 1708 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
UBE2D3-208ENST00000394803 HSP90AB1P08238 724 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-208ENST00000394803 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-208ENST00000394803 PRAM1Q96QH2 718 aa12.55□□□□□ -0.4
UBE2D3-208ENST00000394803 ARHGEF40Q8TER5 1519 aa12.55□□□□□ -0.4
UBE2D3-208ENST00000394803 MYO5BQ9ULV0 1848 aa12.55□□□□□ -0.4
UBE2D3-208ENST00000394803 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
UBE2D3-208ENST00000394803 STK26Q9P289 416 aa12.54□□□□□ -0.4
UBE2D3-208ENST00000394803 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
UBE2D3-208ENST00000394803 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
UBE2D3-208ENST00000394803 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-208ENST00000394803 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms