RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 RBM27Q9P2N5 1060 aaKnown RBP20.85■□□□□ 0.93
SIPA1-201ENST00000394224 FYB1O15117 783 aa20.84■□□□□ 0.93
SIPA1-201ENST00000394224 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
SIPA1-201ENST00000394224 MYO5CQ9NQX4 1742 aa20.83■□□□□ 0.93
SIPA1-201ENST00000394224 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.93
SIPA1-201ENST00000394224 ANP32BQ92688 251 aaKnown RBP20.83■□□□□ 0.93
SIPA1-201ENST00000394224 DUOX2Q9NRD8 1548 aa20.83■□□□□ 0.92
SIPA1-201ENST00000394224 PTPRTO14522 1441 aa20.82■□□□□ 0.92
SIPA1-201ENST00000394224 PLCB2Q00722 1185 aa20.82■□□□□ 0.92
SIPA1-201ENST00000394224 PLCH2O75038 1416 aa20.81■□□□□ 0.92
SIPA1-201ENST00000394224 NLRP1Q9C000 1473 aa20.8■□□□□ 0.92
SIPA1-201ENST00000394224 PRPF40AO75400 957 aaKnown RBP20.8■□□□□ 0.92
SIPA1-201ENST00000394224 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
SIPA1-201ENST00000394224 ARHGEF5Q12774 1597 aa20.8■□□□□ 0.92
SIPA1-201ENST00000394224 NASPP49321 788 aaPredicted RBP20.8■□□□□ 0.92
SIPA1-201ENST00000394224 FBXO31Q5XUX0 539 aaPredicted RBP20.8■□□□□ 0.92
SIPA1-201ENST00000394224 C14orf93Q9H972 538 aaKnown RBP20.8■□□□□ 0.92
SIPA1-201ENST00000394224 MAST1Q9Y2H9 1570 aa20.8■□□□□ 0.92
SIPA1-201ENST00000394224 SYNMO15061 1565 aa20.79■□□□□ 0.92
SIPA1-201ENST00000394224 GOLGA6L22H0YM25 854 aa20.79■□□□□ 0.92
SIPA1-201ENST00000394224 NUCB1Q02818 461 aa20.79■□□□□ 0.92
SIPA1-201ENST00000394224 IDI1Q13907 227 aa20.79■□□□□ 0.92
SIPA1-201ENST00000394224 ZGPATQ8N5A5 531 aaKnown RBP20.79■□□□□ 0.92
SIPA1-201ENST00000394224 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
SIPA1-201ENST00000394224 C8orf58Q8NAV2 365 aa20.79■□□□□ 0.92
SIPA1-201ENST00000394224 FAM13BQ9NYF5 915 aa20.79■□□□□ 0.92
SIPA1-201ENST00000394224 BCL11BQ9C0K0 894 aaPredicted RBP20.78■□□□□ 0.92
SIPA1-201ENST00000394224 SMC5Q8IY18 1101 aa20.78■□□□□ 0.92
SIPA1-201ENST00000394224 EIF2AK4Q9P2K8 1649 aaKnown RBP20.77■□□□□ 0.92
SIPA1-201ENST00000394224 FSD2A1L4K1 749 aa20.77■□□□□ 0.92
SIPA1-201ENST00000394224 CDK19Q9BWU1 502 aa20.77■□□□□ 0.91
SIPA1-201ENST00000394224 K7ELQ4 463 aaPredicted RBP20.76■□□□□ 0.91
SIPA1-201ENST00000394224 TWISTNBQ3B726 338 aaPredicted RBP20.76■□□□□ 0.91
SIPA1-201ENST00000394224 TERF2IPQ9NYB0 399 aa20.76■□□□□ 0.91
SIPA1-201ENST00000394224 HDGFL2Q7Z4V5 671 aaPredicted RBP20.76■□□□□ 0.91
SIPA1-201ENST00000394224 GDPD2Q9HCC8 539 aa20.76■□□□□ 0.91
SIPA1-201ENST00000394224 NME9Q86XW9 330 aa20.76■□□□□ 0.91
SIPA1-201ENST00000394224 A0A1W2PP64 1363 aa20.75■□□□□ 0.91
SIPA1-201ENST00000394224 HDAC1Q13547 482 aaPredicted RBP20.75■□□□□ 0.91
SIPA1-201ENST00000394224 R3HCC1Q9Y3T6 440 aaKnown RBP20.75■□□□□ 0.91
SIPA1-201ENST00000394224 MCM10Q7L590 875 aa20.75■□□□□ 0.91
SIPA1-201ENST00000394224 SIRT2Q8IXJ6 389 aa20.75■□□□□ 0.91
SIPA1-201ENST00000394224 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
SIPA1-201ENST00000394224 MSNP26038 577 aaKnown RBP20.74■□□□□ 0.91
SIPA1-201ENST00000394224 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
SIPA1-201ENST00000394224 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
SIPA1-201ENST00000394224 KIAA1211Q6ZU35 1233 aa20.74■□□□□ 0.91
SIPA1-201ENST00000394224 CLTCL1P53675 1640 aa20.74■□□□□ 0.91
SIPA1-201ENST00000394224 F6X3S4 739 aa20.74■□□□□ 0.91
SIPA1-201ENST00000394224 VGFO15240 615 aaPredicted RBP20.74■□□□□ 0.91
SIPA1-201ENST00000394224 PLEKHF1Q96S99 279 aa20.74■□□□□ 0.91
SIPA1-201ENST00000394224 MBIPQ9NS73 344 aa20.74■□□□□ 0.91
SIPA1-201ENST00000394224 KIF16BQ96L93 1317 aa20.74■□□□□ 0.91
SIPA1-201ENST00000394224 PREX2Q70Z35 1606 aa20.73■□□□□ 0.91
SIPA1-201ENST00000394224 CLCN1P35523 988 aa20.73■□□□□ 0.91
SIPA1-201ENST00000394224 ZNF692Q9BU19 519 aaPredicted RBP20.73■□□□□ 0.91
SIPA1-201ENST00000394224 MADDQ8WXG6 1647 aa20.73■□□□□ 0.91
SIPA1-201ENST00000394224 ABCC2Q92887 1545 aa20.72■□□□□ 0.91
SIPA1-201ENST00000394224 CD109Q6YHK3 1445 aa20.72■□□□□ 0.91
SIPA1-201ENST00000394224 NINLQ9Y2I6 1382 aa20.71■□□□□ 0.91
SIPA1-201ENST00000394224 ZBTB7BO15156 539 aaPredicted RBP20.71■□□□□ 0.91
SIPA1-201ENST00000394224 ZMYND15Q9H091 742 aa20.71■□□□□ 0.91
SIPA1-201ENST00000394224 NPC1L1Q9UHC9 1359 aa20.71■□□□□ 0.91
SIPA1-201ENST00000394224 AEBP1Q8IUX7 1158 aa20.71■□□□□ 0.91
SIPA1-201ENST00000394224 KIF2CQ99661 725 aa20.71■□□□□ 0.91
SIPA1-201ENST00000394224 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
SIPA1-201ENST00000394224 MAP4K4O95819 1239 aaPredicted RBP20.71■□□□□ 0.91
SIPA1-201ENST00000394224 RILPL2Q969X0 211 aa20.71■□□□□ 0.91
SIPA1-201ENST00000394224 BAG4O95429 457 aaKnown RBP20.7■□□□□ 0.9
SIPA1-201ENST00000394224 GSPT1P15170 499 aaKnown RBP20.7■□□□□ 0.9
SIPA1-201ENST00000394224 GLIPR1L2Q4G1C9 344 aa20.7■□□□□ 0.9
SIPA1-201ENST00000394224 FANCAO15360 1455 aa20.7■□□□□ 0.9
SIPA1-201ENST00000394224 PTMAP06454 111 aaKnown RBP20.69■□□□□ 0.9
SIPA1-201ENST00000394224 TRIM6-TRIM34B2RNG4 842 aa20.69■□□□□ 0.9
SIPA1-201ENST00000394224 VAMP4O75379 141 aa20.69■□□□□ 0.9
SIPA1-201ENST00000394224 EXOC6BQ9Y2D4 811 aa20.68■□□□□ 0.9
SIPA1-201ENST00000394224 SYCE3A1L190 88 aa20.68■□□□□ 0.9
SIPA1-201ENST00000394224 RAB3GAP1Q15042 981 aa20.67■□□□□ 0.9
SIPA1-201ENST00000394224 DNTTIP2Q5QJE6 756 aaKnown RBP20.67■□□□□ 0.9
SIPA1-201ENST00000394224 UPF3BQ9BZI7 483 aaKnown RBP20.67■□□□□ 0.9
SIPA1-201ENST00000394224 ADGRL1O94910 1474 aa20.67■□□□□ 0.9
SIPA1-201ENST00000394224 CCDC27Q2M243 656 aa20.67■□□□□ 0.9
SIPA1-201ENST00000394224 IQGAP3Q86VI3 1631 aa20.67■□□□□ 0.9
SIPA1-201ENST00000394224 TXNDC2Q86VQ3 553 aa20.67■□□□□ 0.9
SIPA1-201ENST00000394224 CDC45O75419 566 aa20.66■□□□□ 0.9
SIPA1-201ENST00000394224 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
SIPA1-201ENST00000394224 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
SIPA1-201ENST00000394224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.66■□□□□ 0.9
SIPA1-201ENST00000394224 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
SIPA1-201ENST00000394224 NEK4P51957 841 aa20.66■□□□□ 0.9
SIPA1-201ENST00000394224 BMP2KLQ5H9B9 411 aa20.66■□□□□ 0.9
SIPA1-201ENST00000394224 DDX54Q8TDD1 881 aaKnown RBP20.66■□□□□ 0.9
SIPA1-201ENST00000394224 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
SIPA1-201ENST00000394224 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
SIPA1-201ENST00000394224 STAC3Q96MF2 364 aa20.65■□□□□ 0.9
SIPA1-201ENST00000394224 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
SIPA1-201ENST00000394224 UNC13BO14795 1591 aa20.65■□□□□ 0.9
SIPA1-201ENST00000394224 MEIS3Q99687 375 aa20.65■□□□□ 0.9
SIPA1-201ENST00000394224 ZNF518AQ6AHZ1 1483 aa20.64■□□□□ 0.9
SIPA1-201ENST00000394224 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms