RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SUPT16HQ9Y5B9 1047 aaKnown RBP26.17■■□□□ 1.78
RAB5C-202ENST00000393860 USP6P35125 1406 aa26.16■■□□□ 1.78
RAB5C-202ENST00000393860 SMG6Q86US8 1419 aaKnown RBP26.15■■□□□ 1.78
RAB5C-202ENST00000393860 TTC21BQ7Z4L5 1316 aa26.15■■□□□ 1.78
RAB5C-202ENST00000393860 ANKARQ7Z5J8 1434 aa26.15■■□□□ 1.78
RAB5C-202ENST00000393860 C14orf37Q86TY3 774 aa26.14■■□□□ 1.78
RAB5C-202ENST00000393860 ADGRL3Q9HAR2 1447 aa26.14■■□□□ 1.78
RAB5C-202ENST00000393860 NGDNQ8NEJ9 315 aaKnown RBP26.14■■□□□ 1.77
RAB5C-202ENST00000393860 NUDCQ9Y266 331 aa26.14■■□□□ 1.77
RAB5C-202ENST00000393860 COG3Q96JB2 828 aa26.12■■□□□ 1.77
RAB5C-202ENST00000393860 COL3A1P02461 1466 aaPredicted RBP26.12■■□□□ 1.77
RAB5C-202ENST00000393860 LMTK3Q96Q04 1460 aa26.12■■□□□ 1.77
RAB5C-202ENST00000393860 MAP2P11137 1827 aaKnown RBP26.11■■□□□ 1.77
RAB5C-202ENST00000393860 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
RAB5C-202ENST00000393860 FKBP8Q14318 412 aa26.1■■□□□ 1.77
RAB5C-202ENST00000393860 PROSER2Q86WR7 435 aaPredicted RBP26.1■■□□□ 1.77
RAB5C-202ENST00000393860 APAF1O14727 1248 aa26.09■■□□□ 1.77
RAB5C-202ENST00000393860 CDCA7LQ96GN5 454 aa26.09■■□□□ 1.77
RAB5C-202ENST00000393860 POLKQ9UBT6 870 aa26.09■■□□□ 1.77
RAB5C-202ENST00000393860 STRCP1A6NGW2 1772 aa26.09■■□□□ 1.77
RAB5C-202ENST00000393860 SSH2Q76I76 1423 aa26.08■■□□□ 1.76
RAB5C-202ENST00000393860 NEFLP07196 543 aa26.07■■□□□ 1.76
RAB5C-202ENST00000393860 EMILIN1Q9Y6C2 1016 aa26.07■■□□□ 1.76
RAB5C-202ENST00000393860 U2SURPO15042 1029 aaKnown RBP26.06■■□□□ 1.76
RAB5C-202ENST00000393860 U2AF1L5P0DN76 240 aaPredicted RBP26.06■■□□□ 1.76
RAB5C-202ENST00000393860 U2AF1Q01081 240 aaKnown RBP eCLIP26.06■■□□□ 1.76
RAB5C-202ENST00000393860 IRX6P78412 446 aaPredicted RBP26.04■■□□□ 1.76
RAB5C-202ENST00000393860 RRS1Q15050 365 aaKnown RBP26.04■■□□□ 1.76
RAB5C-202ENST00000393860 OVOS2A0A0J9YW53 1432 aa26.04■■□□□ 1.76
RAB5C-202ENST00000393860 OVOS2Q6IE36 1432 aa26.04■■□□□ 1.76
RAB5C-202ENST00000393860 STRCQ7RTU9 1775 aa26.03■■□□□ 1.76
RAB5C-202ENST00000393860 PDE3BQ13370 1112 aa26.02■■□□□ 1.76
RAB5C-202ENST00000393860 PHF8Q9UPP1 1060 aa26.02■■□□□ 1.76
RAB5C-202ENST00000393860 PNPLA6Q8IY17 1366 aa26.02■■□□□ 1.76
RAB5C-202ENST00000393860 DIAPH1O60610 1272 aaKnown RBP26.02■■□□□ 1.76
RAB5C-202ENST00000393860 PIK3C2AO00443 1686 aa26.01■■□□□ 1.75
RAB5C-202ENST00000393860 SOX12O15370 315 aa26.01■■□□□ 1.75
RAB5C-202ENST00000393860 AATKQ6ZMQ8 1374 aa26.01■■□□□ 1.75
RAB5C-202ENST00000393860 TTC21AQ8NDW8 1320 aa26■■□□□ 1.75
RAB5C-202ENST00000393860 ESCO1Q5FWF5 840 aa26■■□□□ 1.75
RAB5C-202ENST00000393860 RUNDC1Q96C34 613 aa26■■□□□ 1.75
RAB5C-202ENST00000393860 RRP7AQ9Y3A4 280 aaKnown RBP25.99■■□□□ 1.75
RAB5C-202ENST00000393860 IQSEC2Q5JU85 1478 aa25.98■■□□□ 1.75
RAB5C-202ENST00000393860 ZNF521Q96K83 1311 aa25.98■■□□□ 1.75
RAB5C-202ENST00000393860 TMEM94Q12767 1356 aa25.97■■□□□ 1.75
RAB5C-202ENST00000393860 NEUROD2Q15784 382 aa25.97■■□□□ 1.75
RAB5C-202ENST00000393860 NUTM2GQ5VZR2 741 aa25.97■■□□□ 1.75
RAB5C-202ENST00000393860 CDK12Q9NYV4 1490 aaPredicted RBP25.97■■□□□ 1.75
RAB5C-202ENST00000393860 PAK3O75914 559 aaPredicted RBP25.96■■□□□ 1.75
RAB5C-202ENST00000393860 TCP11L2Q8N4U5 519 aa25.96■■□□□ 1.75
RAB5C-202ENST00000393860 ORAI2Q96SN7 254 aa25.96■■□□□ 1.75
RAB5C-202ENST00000393860 USP31Q70CQ4 1352 aa25.92■■□□□ 1.74
RAB5C-202ENST00000393860 PEAK1Q9H792 1746 aa25.92■■□□□ 1.74
RAB5C-202ENST00000393860 MARF1Q9Y4F3 1742 aaKnown RBP25.92■■□□□ 1.74
RAB5C-202ENST00000393860 GOLGA2Q08379 1002 aa25.92■■□□□ 1.74
RAB5C-202ENST00000393860 C19orf44Q9H6X5 657 aa25.92■■□□□ 1.74
RAB5C-202ENST00000393860 NLRP6P59044 892 aa25.91■■□□□ 1.74
RAB5C-202ENST00000393860 DMRT2Q9Y5R5 561 aa25.91■■□□□ 1.74
RAB5C-202ENST00000393860 ABTB2Q8N961 1025 aa25.9■■□□□ 1.74
RAB5C-202ENST00000393860 LRRC7Q96NW7 1537 aa25.89■■□□□ 1.74
RAB5C-202ENST00000393860 IL13P35225 146 aa25.89■■□□□ 1.74
RAB5C-202ENST00000393860 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
RAB5C-202ENST00000393860 PSME1Q06323 249 aa25.89■■□□□ 1.74
RAB5C-202ENST00000393860 PLEKHF1Q96S99 279 aa25.89■■□□□ 1.74
RAB5C-202ENST00000393860 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
RAB5C-202ENST00000393860 C1orf167Q5SNV9 1468 aa25.88■■□□□ 1.73
RAB5C-202ENST00000393860 HMOX1P09601 288 aa25.88■■□□□ 1.73
RAB5C-202ENST00000393860 FOXO3O43524 673 aa25.87■■□□□ 1.73
RAB5C-202ENST00000393860 WWC1Q8IX03 1113 aa25.87■■□□□ 1.73
RAB5C-202ENST00000393860 ATF3P18847 181 aa25.86■■□□□ 1.73
RAB5C-202ENST00000393860 DUSP27Q5VZP5 1158 aa25.86■■□□□ 1.73
RAB5C-202ENST00000393860 SLFN5Q08AF3 891 aa25.86■■□□□ 1.73
RAB5C-202ENST00000393860 RCAN3Q9UKA8 241 aa25.86■■□□□ 1.73
RAB5C-202ENST00000393860 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
RAB5C-202ENST00000393860 MAPK8IP3Q9UPT6 1336 aa25.86■■□□□ 1.73
RAB5C-202ENST00000393860 NGEFQ8N5V2 710 aa25.84■■□□□ 1.73
RAB5C-202ENST00000393860 MAP3K19Q56UN5 1328 aa25.84■■□□□ 1.73
RAB5C-202ENST00000393860 ZNF335Q9H4Z2 1342 aaPredicted RBP25.84■■□□□ 1.73
RAB5C-202ENST00000393860 USP54Q70EL1 1684 aa25.84■■□□□ 1.73
RAB5C-202ENST00000393860 MST1RQ04912 1400 aa25.84■■□□□ 1.73
RAB5C-202ENST00000393860 RSPH6AQ9H0K4 717 aa25.84■■□□□ 1.73
RAB5C-202ENST00000393860 PRKAR2BP31323 418 aa25.83■■□□□ 1.73
RAB5C-202ENST00000393860 HSP90AB2PQ58FF8 381 aa25.83■■□□□ 1.73
RAB5C-202ENST00000393860 RNF123Q5XPI4 1314 aa25.82■■□□□ 1.72
RAB5C-202ENST00000393860 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
RAB5C-202ENST00000393860 KIF1AQ12756 1690 aa25.81■■□□□ 1.72
RAB5C-202ENST00000393860 FCHSD2O94868 740 aa25.81■■□□□ 1.72
RAB5C-202ENST00000393860 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
RAB5C-202ENST00000393860 TMPOP42166 694 aaKnown RBP25.8■■□□□ 1.72
RAB5C-202ENST00000393860 NCOA3Q9Y6Q9 1424 aa25.8■■□□□ 1.72
RAB5C-202ENST00000393860 DCCP43146 1447 aa25.8■■□□□ 1.72
RAB5C-202ENST00000393860 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
RAB5C-202ENST00000393860 MSH6P52701 1360 aa25.79■■□□□ 1.72
RAB5C-202ENST00000393860 E9PSI1 815 aa25.78■■□□□ 1.72
RAB5C-202ENST00000393860 TRMT2AQ8IZ69 625 aaKnown RBP25.78■■□□□ 1.72
RAB5C-202ENST00000393860 AMPHP49418 695 aa25.78■■□□□ 1.72
RAB5C-202ENST00000393860 PNNQ9H307 717 aaKnown RBP25.78■■□□□ 1.72
RAB5C-202ENST00000393860 SBNO1A3KN83 1393 aa25.78■■□□□ 1.72
RAB5C-202ENST00000393860 DDX17Q92841 729 aaKnown RBP25.77■■□□□ 1.72
RAB5C-202ENST00000393860 TRPM3Q9HCF6 1732 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms