RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
CTSC-202ENST00000393301 NUDT16Q96DE0 195 aaKnown RBP17.96■□□□□ 0.47
CTSC-202ENST00000393301 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
CTSC-202ENST00000393301 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
CTSC-202ENST00000393301 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
CTSC-202ENST00000393301 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
CTSC-202ENST00000393301 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
CTSC-202ENST00000393301 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
CTSC-202ENST00000393301 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
CTSC-202ENST00000393301 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
CTSC-202ENST00000393301 QRICH2Q9H0J4 1663 aa17.92■□□□□ 0.46
CTSC-202ENST00000393301 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
CTSC-202ENST00000393301 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
CTSC-202ENST00000393301 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
CTSC-202ENST00000393301 BTG4Q9NY30 223 aa17.9■□□□□ 0.46
CTSC-202ENST00000393301 SPATA31A5Q5VU36 1347 aa17.9■□□□□ 0.46
CTSC-202ENST00000393301 SPATA31A7Q8IWB4 1347 aa17.9■□□□□ 0.46
CTSC-202ENST00000393301 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
CTSC-202ENST00000393301 USP19O94966 1318 aa17.89■□□□□ 0.45
CTSC-202ENST00000393301 CPDO75976 1380 aa17.89■□□□□ 0.45
CTSC-202ENST00000393301 NBPF8Q3BBV2 869 aa17.88■□□□□ 0.45
CTSC-202ENST00000393301 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
CTSC-202ENST00000393301 ACEP12821 1306 aa17.88■□□□□ 0.45
CTSC-202ENST00000393301 CENPJQ9HC77 1338 aaPredicted RBP17.88■□□□□ 0.45
CTSC-202ENST00000393301 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
CTSC-202ENST00000393301 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
CTSC-202ENST00000393301 DISP2A7MBM2 1401 aa17.87■□□□□ 0.45
CTSC-202ENST00000393301 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
CTSC-202ENST00000393301 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
CTSC-202ENST00000393301 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
CTSC-202ENST00000393301 PPIP5K1Q6PFW1 1433 aa17.84■□□□□ 0.45
CTSC-202ENST00000393301 SPATA31A1Q5TZJ5 1347 aa17.84■□□□□ 0.45
CTSC-202ENST00000393301 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
CTSC-202ENST00000393301 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
CTSC-202ENST00000393301 SSH2Q76I76 1423 aa17.83■□□□□ 0.45
CTSC-202ENST00000393301 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
CTSC-202ENST00000393301 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.44
CTSC-202ENST00000393301 SLIT3O75094 1523 aa17.82■□□□□ 0.44
CTSC-202ENST00000393301 USP6P35125 1406 aa17.82■□□□□ 0.44
CTSC-202ENST00000393301 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
CTSC-202ENST00000393301 LRP5O75197 1615 aa17.8■□□□□ 0.44
CTSC-202ENST00000393301 PLEKHG5O94827 1062 aa17.8■□□□□ 0.44
CTSC-202ENST00000393301 AKAP12Q02952 1782 aa17.8■□□□□ 0.44
CTSC-202ENST00000393301 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
CTSC-202ENST00000393301 SF3B2Q13435 895 aaKnown RBP17.79■□□□□ 0.44
CTSC-202ENST00000393301 BARGINQ6ZT62 677 aa17.79■□□□□ 0.44
CTSC-202ENST00000393301 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
CTSC-202ENST00000393301 PIK3C2AO00443 1686 aa17.79■□□□□ 0.44
CTSC-202ENST00000393301 PARP4Q9UKK3 1724 aaKnown RBP17.78■□□□□ 0.44
CTSC-202ENST00000393301 COL18A1P39060 1754 aa17.77■□□□□ 0.44
CTSC-202ENST00000393301 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.44
CTSC-202ENST00000393301 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
CTSC-202ENST00000393301 ABTB2Q8N961 1025 aa17.77■□□□□ 0.44
CTSC-202ENST00000393301 CHRNA2Q15822 529 aa17.76■□□□□ 0.43
CTSC-202ENST00000393301 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
CTSC-202ENST00000393301 USP54Q70EL1 1684 aa17.76■□□□□ 0.43
CTSC-202ENST00000393301 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
CTSC-202ENST00000393301 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
CTSC-202ENST00000393301 GCP02774 474 aa17.75■□□□□ 0.43
CTSC-202ENST00000393301 BAG6P46379 1132 aa17.75■□□□□ 0.43
CTSC-202ENST00000393301 ZC3H6P61129 1189 aaKnown RBP17.75■□□□□ 0.43
CTSC-202ENST00000393301 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
CTSC-202ENST00000393301 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
CTSC-202ENST00000393301 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
CTSC-202ENST00000393301 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
CTSC-202ENST00000393301 ABCC6O95255 1503 aa17.73■□□□□ 0.43
CTSC-202ENST00000393301 MON2Q7Z3U7 1717 aa17.73■□□□□ 0.43
CTSC-202ENST00000393301 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
CTSC-202ENST00000393301 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
CTSC-202ENST00000393301 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
CTSC-202ENST00000393301 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
CTSC-202ENST00000393301 RREB1Q92766 1687 aa17.72■□□□□ 0.43
CTSC-202ENST00000393301 PARD3Q8TEW0 1356 aa17.72■□□□□ 0.43
CTSC-202ENST00000393301 A0A0G2JS52 829 aa17.72■□□□□ 0.43
CTSC-202ENST00000393301 MYT1Q01538 1121 aa17.72■□□□□ 0.43
CTSC-202ENST00000393301 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
CTSC-202ENST00000393301 PEAK1Q9H792 1746 aa17.71■□□□□ 0.43
CTSC-202ENST00000393301 CRB1P82279 1406 aa17.71■□□□□ 0.43
CTSC-202ENST00000393301 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
CTSC-202ENST00000393301 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
CTSC-202ENST00000393301 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
CTSC-202ENST00000393301 RGPD3A6NKT7 1758 aaPredicted RBP17.7■□□□□ 0.42
CTSC-202ENST00000393301 RGPD4Q7Z3J3 1758 aa17.7■□□□□ 0.42
CTSC-202ENST00000393301 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
CTSC-202ENST00000393301 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
CTSC-202ENST00000393301 NFAT5O94916 1531 aa17.68■□□□□ 0.42
CTSC-202ENST00000393301 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
CTSC-202ENST00000393301 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
CTSC-202ENST00000393301 EVA1CP58658 441 aa17.67■□□□□ 0.42
CTSC-202ENST00000393301 TTC21BQ7Z4L5 1316 aa17.67■□□□□ 0.42
CTSC-202ENST00000393301 SBF2Q86WG5 1849 aa17.66■□□□□ 0.42
CTSC-202ENST00000393301 NLRP6P59044 892 aa17.66■□□□□ 0.42
CTSC-202ENST00000393301 FAM182BQ5T319 152 aa17.66■□□□□ 0.42
CTSC-202ENST00000393301 CAMKK2Q96RR4 588 aa17.66■□□□□ 0.42
CTSC-202ENST00000393301 NUP188Q5SRE5 1749 aa17.66■□□□□ 0.42
CTSC-202ENST00000393301 BCL9O00512 1426 aa17.65■□□□□ 0.42
CTSC-202ENST00000393301 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
CTSC-202ENST00000393301 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
CTSC-202ENST00000393301 USP31Q70CQ4 1352 aa17.65■□□□□ 0.42
CTSC-202ENST00000393301 ARHGEF25Q86VW2 580 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms