RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
CALD1-203ENST00000393118 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
CALD1-203ENST00000393118 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
CALD1-203ENST00000393118 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
CALD1-203ENST00000393118 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
CALD1-203ENST00000393118 PTPRTO14522 1441 aa13.16□□□□□ -0.3
CALD1-203ENST00000393118 PLXNC1O60486 1568 aa13.16□□□□□ -0.3
CALD1-203ENST00000393118 TRPM2O94759 1503 aa13.16□□□□□ -0.3
CALD1-203ENST00000393118 ZFYVE16Q7Z3T8 1539 aa13.15□□□□□ -0.3
CALD1-203ENST00000393118 NPC1L1Q9UHC9 1359 aa13.15□□□□□ -0.3
CALD1-203ENST00000393118 TRIM27P14373 513 aa13.15□□□□□ -0.3
CALD1-203ENST00000393118 UNC13BO14795 1591 aa13.15□□□□□ -0.3
CALD1-203ENST00000393118 FCHSD2O94868 740 aa13.15□□□□□ -0.3
CALD1-203ENST00000393118 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
CALD1-203ENST00000393118 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 ERVK-7P63135 1459 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 AAMPQ13685 434 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
CALD1-203ENST00000393118 NINLQ9Y2I6 1382 aa13.13□□□□□ -0.31
CALD1-203ENST00000393118 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
CALD1-203ENST00000393118 FAM43AQ8N2R8 423 aa13.13□□□□□ -0.31
CALD1-203ENST00000393118 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
CALD1-203ENST00000393118 POGZQ7Z3K3 1410 aa13.12□□□□□ -0.31
CALD1-203ENST00000393118 CEBPAP49715 358 aaPredicted RBP13.12□□□□□ -0.31
CALD1-203ENST00000393118 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
CALD1-203ENST00000393118 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
CALD1-203ENST00000393118 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
CALD1-203ENST00000393118 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
CALD1-203ENST00000393118 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
CALD1-203ENST00000393118 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
CALD1-203ENST00000393118 CLTCL1P53675 1640 aa13.11□□□□□ -0.31
CALD1-203ENST00000393118 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
CALD1-203ENST00000393118 FAM83GA6ND36 823 aa13.1□□□□□ -0.31
CALD1-203ENST00000393118 NLRP6P59044 892 aa13.1□□□□□ -0.31
CALD1-203ENST00000393118 NSD2O96028 1365 aa13.1□□□□□ -0.31
CALD1-203ENST00000393118 OS9Q13438 667 aaPredicted RBP13.1□□□□□ -0.31
CALD1-203ENST00000393118 TSPYL4Q9UJ04 414 aa13.09□□□□□ -0.31
CALD1-203ENST00000393118 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
CALD1-203ENST00000393118 YEATS2Q9ULM3 1422 aa13.09□□□□□ -0.31
CALD1-203ENST00000393118 INSRP06213 1382 aa13.08□□□□□ -0.31
CALD1-203ENST00000393118 SEC24BO95487 1268 aa13.08□□□□□ -0.32
CALD1-203ENST00000393118 MCM10Q7L590 875 aa13.08□□□□□ -0.32
CALD1-203ENST00000393118 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
CALD1-203ENST00000393118 GOLGA6L3A6NEY3 463 aa13.08□□□□□ -0.32
CALD1-203ENST00000393118 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
CALD1-203ENST00000393118 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
CALD1-203ENST00000393118 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
CALD1-203ENST00000393118 E9PCH4 1651 aa13.07□□□□□ -0.32
CALD1-203ENST00000393118 KDM5AP29375 1690 aaKnown RBP13.07□□□□□ -0.32
CALD1-203ENST00000393118 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
CALD1-203ENST00000393118 HMMRO75330 724 aa13.07□□□□□ -0.32
CALD1-203ENST00000393118 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
CALD1-203ENST00000393118 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
CALD1-203ENST00000393118 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
CALD1-203ENST00000393118 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
CALD1-203ENST00000393118 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
CALD1-203ENST00000393118 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
CALD1-203ENST00000393118 SYNMO15061 1565 aa13.05□□□□□ -0.32
CALD1-203ENST00000393118 SBNO2Q9Y2G9 1366 aa13.05□□□□□ -0.32
CALD1-203ENST00000393118 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
CALD1-203ENST00000393118 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
CALD1-203ENST00000393118 TET3O43151 1660 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
CALD1-203ENST00000393118 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 MYOM2P54296 1465 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 PUS7Q96PZ0 661 aaKnown RBP13.04□□□□□ -0.32
CALD1-203ENST00000393118 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
CALD1-203ENST00000393118 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
CALD1-203ENST00000393118 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
CALD1-203ENST00000393118 RILPL2Q969X0 211 aa13.02□□□□□ -0.32
CALD1-203ENST00000393118 GBP4Q96PP9 640 aa13.02□□□□□ -0.32
CALD1-203ENST00000393118 SPHKAPQ2M3C7 1700 aa13.02□□□□□ -0.32
CALD1-203ENST00000393118 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.32
CALD1-203ENST00000393118 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.32
CALD1-203ENST00000393118 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.32
CALD1-203ENST00000393118 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
CALD1-203ENST00000393118 EFCAB6Q5THR3 1501 aa13.02□□□□□ -0.33
CALD1-203ENST00000393118 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
CALD1-203ENST00000393118 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
CALD1-203ENST00000393118 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.33
CALD1-203ENST00000393118 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
CALD1-203ENST00000393118 SHROOM2Q13796 1616 aa13.01□□□□□ -0.33
CALD1-203ENST00000393118 IFT57Q9NWB7 429 aa13.01□□□□□ -0.33
CALD1-203ENST00000393118 RRP9O43818 475 aaKnown RBP13.01□□□□□ -0.33
CALD1-203ENST00000393118 PSME1Q06323 249 aa13.01□□□□□ -0.33
CALD1-203ENST00000393118 KIF1BO60333 1816 aa13.01□□□□□ -0.33
CALD1-203ENST00000393118 PPIP5K1Q6PFW1 1433 aa13□□□□□ -0.33
CALD1-203ENST00000393118 A0A0G2JS52 829 aa13□□□□□ -0.33
CALD1-203ENST00000393118 GCC1Q96CN9 775 aa13□□□□□ -0.33
CALD1-203ENST00000393118 MLH3Q9UHC1 1453 aa13□□□□□ -0.33
CALD1-203ENST00000393118 ACEP12821 1306 aa13□□□□□ -0.33
CALD1-203ENST00000393118 KRT24Q2M2I5 525 aa13□□□□□ -0.33
CALD1-203ENST00000393118 AMOTL2Q9Y2J4 779 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms