RNA–Protein interactions for RNA: ENST00000392393.7

VNN3-203, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-203ENST00000392393 RDH13Q8NBN7 331 aa9.78□□□□□ -0.84
VNN3-203ENST00000392393 PIK3R5Q8WYR1 880 aa9.78□□□□□ -0.84
VNN3-203ENST00000392393 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
VNN3-203ENST00000392393 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.85
VNN3-203ENST00000392393 CDCA7Q9BWT1 371 aaPredicted RBP9.77□□□□□ -0.85
VNN3-203ENST00000392393 LNPKQ9C0E8 428 aa9.77□□□□□ -0.85
VNN3-203ENST00000392393 TMEM134Q9H6X4 195 aa9.77□□□□□ -0.85
VNN3-203ENST00000392393 H3BRB1 525 aa9.76□□□□□ -0.85
VNN3-203ENST00000392393 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
VNN3-203ENST00000392393 RASA1P20936 1047 aa9.76□□□□□ -0.85
VNN3-203ENST00000392393 NR1H3Q13133 447 aa9.76□□□□□ -0.85
VNN3-203ENST00000392393 ECM1Q16610 540 aa9.76□□□□□ -0.85
VNN3-203ENST00000392393 ASB16Q96NS5 453 aa9.76□□□□□ -0.85
VNN3-203ENST00000392393 TUT1Q9H6E5 874 aaKnown RBP9.76□□□□□ -0.85
VNN3-203ENST00000392393 ABCC9O60706 1549 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 ABL1P00519 1130 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 FBXO45P0C2W1 286 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 DNAJB2P25686 324 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 MAPK1P28482 360 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 USP46P62068 366 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 MRPL58Q14197 206 aaKnown RBP9.75□□□□□ -0.85
VNN3-203ENST00000392393 ANKMY2Q8IV38 441 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 ADAM33Q9BZ11 813 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 BRPF3Q9ULD4 1205 aa9.75□□□□□ -0.85
VNN3-203ENST00000392393 MARCH6O60337 910 aa9.74□□□□□ -0.85
VNN3-203ENST00000392393 GCGRP47871 477 aa9.74□□□□□ -0.85
VNN3-203ENST00000392393 ATN1P54259 1190 aaPredicted RBP9.74□□□□□ -0.85
VNN3-203ENST00000392393 LARP1Q6PKG0 1096 aaKnown RBP9.74□□□□□ -0.85
VNN3-203ENST00000392393 FAM9AQ8IZU1 332 aaPredicted RBP9.74□□□□□ -0.85
VNN3-203ENST00000392393 PIP4P2Q8N4L2 257 aa9.74□□□□□ -0.85
VNN3-203ENST00000392393 C1orf216Q8TAB5 229 aa9.74□□□□□ -0.85
VNN3-203ENST00000392393 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
VNN3-203ENST00000392393 NUDT18Q6ZVK8 323 aa9.73□□□□□ -0.85
VNN3-203ENST00000392393 ZDHHC16Q969W1 377 aa9.73□□□□□ -0.85
VNN3-203ENST00000392393 TANGO6Q9C0B7 1094 aa9.73□□□□□ -0.85
VNN3-203ENST00000392393 EGFL7Q9UHF1 273 aa9.73□□□□□ -0.85
VNN3-203ENST00000392393 ICMTO60725 284 aa9.72□□□□□ -0.85
VNN3-203ENST00000392393 DPYDQ12882 1025 aa9.72□□□□□ -0.85
VNN3-203ENST00000392393 NCOA4Q13772 614 aa9.72□□□□□ -0.85
VNN3-203ENST00000392393 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
VNN3-203ENST00000392393 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
VNN3-203ENST00000392393 SCAMP3O14828 347 aaKnown RBP9.71□□□□□ -0.85
VNN3-203ENST00000392393 NOL8Q76FK4 1167 aaKnown RBP9.71□□□□□ -0.85
VNN3-203ENST00000392393 NOP9Q86U38 636 aaKnown RBP9.71□□□□□ -0.85
VNN3-203ENST00000392393 DHX38Q92620 1227 aaKnown RBP9.71□□□□□ -0.85
VNN3-203ENST00000392393 TINF2Q9BSI4 451 aa9.71□□□□□ -0.85
VNN3-203ENST00000392393 SWI5Q1ZZU3 235 aa9.71□□□□□ -0.86
VNN3-203ENST00000392393 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.86
VNN3-203ENST00000392393 GALR2O43603 387 aaPredicted RBP9.7□□□□□ -0.86
VNN3-203ENST00000392393 LZTS3O60299 673 aaPredicted RBP9.7□□□□□ -0.86
VNN3-203ENST00000392393 PRMT3O60678 531 aa9.7□□□□□ -0.86
VNN3-203ENST00000392393 KCNH2Q12809 1159 aa9.7□□□□□ -0.86
VNN3-203ENST00000392393 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
VNN3-203ENST00000392393 TAS1R3Q7RTX0 852 aa9.7□□□□□ -0.86
VNN3-203ENST00000392393 METTL16Q86W50 562 aaKnown RBP9.7□□□□□ -0.86
VNN3-203ENST00000392393 ZNF454Q8N9F8 522 aa9.7□□□□□ -0.86
VNN3-203ENST00000392393 GPATCH3Q96I76 525 aa9.7□□□□□ -0.86
VNN3-203ENST00000392393 DCTN4Q9UJW0 460 aa9.7□□□□□ -0.86
VNN3-203ENST00000392393 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.7□□□□□ -0.86
VNN3-203ENST00000392393 GLYCTKQ8IVS8 523 aa9.69□□□□□ -0.86
VNN3-203ENST00000392393 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
VNN3-203ENST00000392393 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
VNN3-203ENST00000392393 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
VNN3-203ENST00000392393 C6orf229H3BNL8 230 aa9.68□□□□□ -0.86
VNN3-203ENST00000392393 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
VNN3-203ENST00000392393 COL9A1P20849 921 aa9.68□□□□□ -0.86
VNN3-203ENST00000392393 OCLNQ16625 522 aa9.68□□□□□ -0.86
VNN3-203ENST00000392393 CUEDC1Q9NWM3 386 aaPredicted RBP9.68□□□□□ -0.86
VNN3-203ENST00000392393 TLDC2A0PJX2 215 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 CLDN10P78369 228 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 ARHGAP4P98171 946 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 COL19A1Q14993 1142 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
VNN3-203ENST00000392393 PRIMPOLQ96LW4 560 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 PRKAG2Q9UGJ0 569 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 ZBBXA8MT70 800 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 CCDC144BQ3MJ40 725 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 NT5DC4Q86YG4 428 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 PIF1Q9H611 641 aa9.67□□□□□ -0.86
VNN3-203ENST00000392393 CXXC1Q9P0U4 656 aaPredicted RBP9.67□□□□□ -0.86
VNN3-203ENST00000392393 TMA7Q9Y2S6 64 aaKnown RBP9.67□□□□□ -0.86
VNN3-203ENST00000392393 P4HBP07237 508 aaKnown RBP9.66□□□□□ -0.86
VNN3-203ENST00000392393 SLC10A3P09131 477 aa9.66□□□□□ -0.86
VNN3-203ENST00000392393 PLCG2P16885 1265 aa9.66□□□□□ -0.86
VNN3-203ENST00000392393 IER5LQ5T953 404 aa9.66□□□□□ -0.86
VNN3-203ENST00000392393 ZSCAN29Q8IWY8 852 aaPredicted RBP9.66□□□□□ -0.86
VNN3-203ENST00000392393 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
VNN3-203ENST00000392393 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
VNN3-203ENST00000392393 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
VNN3-203ENST00000392393 C21orf2O43822 256 aa9.65□□□□□ -0.86
VNN3-203ENST00000392393 DKK1O94907 266 aa9.65□□□□□ -0.86
VNN3-203ENST00000392393 MTMR3Q13615 1198 aa9.65□□□□□ -0.86
VNN3-203ENST00000392393 TATDN2Q93075 761 aa9.65□□□□□ -0.86
VNN3-203ENST00000392393 PNMA3Q9UL41 463 aa9.65□□□□□ -0.86
VNN3-203ENST00000392393 IQSEC3Q9UPP2 1182 aaPredicted RBP9.65□□□□□ -0.86
VNN3-203ENST00000392393 EGFLAMQ63HQ2 1017 aa9.64□□□□□ -0.87
VNN3-203ENST00000392393 RGL4Q8IZJ4 473 aa9.64□□□□□ -0.87
VNN3-203ENST00000392393 SEPT3Q9UH03 358 aa9.64□□□□□ -0.87
VNN3-203ENST00000392393 DNMT3AQ9Y6K1 912 aaPredicted RBP9.64□□□□□ -0.87
VNN3-203ENST00000392393 GTF3C2Q8WUA4 911 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms