RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 CDCA7LQ96GN5 454 aa9.24□□□□□ -0.93
TRAV35-201ENST00000390462 FDX1P10109 184 aa9.23□□□□□ -0.93
TRAV35-201ENST00000390462 ZNF662Q6ZS27 426 aa9.23□□□□□ -0.93
TRAV35-201ENST00000390462 NOP9Q86U38 636 aaKnown RBP9.23□□□□□ -0.93
TRAV35-201ENST00000390462 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
TRAV35-201ENST00000390462 PIK3CDO00329 1044 aa9.22□□□□□ -0.93
TRAV35-201ENST00000390462 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
TRAV35-201ENST00000390462 PLEKHM2Q8IWE5 1019 aa9.22□□□□□ -0.93
TRAV35-201ENST00000390462 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
TRAV35-201ENST00000390462 TSC1Q92574 1164 aa9.22□□□□□ -0.93
TRAV35-201ENST00000390462 CDCA7Q9BWT1 371 aaPredicted RBP9.22□□□□□ -0.93
TRAV35-201ENST00000390462 NOL8Q76FK4 1167 aaKnown RBP9.21□□□□□ -0.94
TRAV35-201ENST00000390462 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
TRAV35-201ENST00000390462 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 POTEB2H3BUK9 544 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 USP46P62068 366 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
TRAV35-201ENST00000390462 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 EYA1Q99502 592 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 BACH2Q9BYV9 841 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
TRAV35-201ENST00000390462 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
TRAV35-201ENST00000390462 HOXA2O43364 376 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 LZTS3O60299 673 aaPredicted RBP9.19□□□□□ -0.94
TRAV35-201ENST00000390462 MARCH6O60337 910 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 SKIP12755 728 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 COL9A1P20849 921 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 SCNN1AP37088 669 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 PTK7Q13308 1070 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 ASB16Q96NS5 453 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 EGFL7Q9UHF1 273 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
TRAV35-201ENST00000390462 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
TRAV35-201ENST00000390462 HDLBPQ00341 1268 aaKnown RBP9.18□□□□□ -0.94
TRAV35-201ENST00000390462 MTMR2Q13614 643 aa9.18□□□□□ -0.94
TRAV35-201ENST00000390462 COL19A1Q14993 1142 aa9.18□□□□□ -0.94
TRAV35-201ENST00000390462 NR6A1Q15406 480 aa9.18□□□□□ -0.94
TRAV35-201ENST00000390462 TANGO6Q9C0B7 1094 aa9.18□□□□□ -0.94
TRAV35-201ENST00000390462 MKRN1Q9UHC7 482 aaKnown RBP9.18□□□□□ -0.94
TRAV35-201ENST00000390462 TMA7Q9Y2S6 64 aaKnown RBP9.18□□□□□ -0.94
TRAV35-201ENST00000390462 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
TRAV35-201ENST00000390462 MAPK1P28482 360 aa9.17□□□□□ -0.94
TRAV35-201ENST00000390462 NR1H3Q13133 447 aa9.17□□□□□ -0.94
TRAV35-201ENST00000390462 C9orf131Q5VYM1 1079 aa9.17□□□□□ -0.94
TRAV35-201ENST00000390462 MAMSTRQ6ZN01 415 aa9.17□□□□□ -0.94
TRAV35-201ENST00000390462 LNPKQ9C0E8 428 aa9.17□□□□□ -0.94
TRAV35-201ENST00000390462 CUEDC1Q9NWM3 386 aaPredicted RBP9.17□□□□□ -0.94
TRAV35-201ENST00000390462 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 ABL1P00519 1130 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 RASA1P20936 1047 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 SWI5Q1ZZU3 235 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 DEPDC4Q8N2C3 294 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 RDH13Q8NBN7 331 aa9.16□□□□□ -0.94
TRAV35-201ENST00000390462 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
TRAV35-201ENST00000390462 PTPREP23469 700 aa9.15□□□□□ -0.94
TRAV35-201ENST00000390462 DNAJB2P25686 324 aa9.15□□□□□ -0.94
TRAV35-201ENST00000390462 ZSCAN29Q8IWY8 852 aaPredicted RBP9.15□□□□□ -0.94
TRAV35-201ENST00000390462 TSKSQ9UJT2 592 aa9.15□□□□□ -0.94
TRAV35-201ENST00000390462 BRPF3Q9ULD4 1205 aa9.15□□□□□ -0.94
TRAV35-201ENST00000390462 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
TRAV35-201ENST00000390462 TLDC2A0PJX2 215 aa9.14□□□□□ -0.95
TRAV35-201ENST00000390462 H3BRB1 525 aa9.14□□□□□ -0.95
TRAV35-201ENST00000390462 ICMTO60725 284 aa9.14□□□□□ -0.95
TRAV35-201ENST00000390462 MRPL58Q14197 206 aaKnown RBP9.14□□□□□ -0.95
TRAV35-201ENST00000390462 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
TRAV35-201ENST00000390462 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
TRAV35-201ENST00000390462 TUT1Q9H6E5 874 aaKnown RBP9.14□□□□□ -0.95
TRAV35-201ENST00000390462 DCTN4Q9UJW0 460 aa9.14□□□□□ -0.95
TRAV35-201ENST00000390462 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
TRAV35-201ENST00000390462 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
TRAV35-201ENST00000390462 GLYCTKQ8IVS8 523 aa9.13□□□□□ -0.95
TRAV35-201ENST00000390462 PSMD1Q99460 953 aa9.13□□□□□ -0.95
TRAV35-201ENST00000390462 TMEM134Q9H6X4 195 aa9.13□□□□□ -0.95
TRAV35-201ENST00000390462 SBNO2Q9Y2G9 1366 aa9.12□□□□□ -0.95
TRAV35-201ENST00000390462 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
TRAV35-201ENST00000390462 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
TRAV35-201ENST00000390462 ZNF211Q13398 564 aaPredicted RBP9.12□□□□□ -0.95
TRAV35-201ENST00000390462 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
TRAV35-201ENST00000390462 FAM174AQ8TBP5 190 aa9.12□□□□□ -0.95
TRAV35-201ENST00000390462 MICAL1Q8TDZ2 1067 aa9.12□□□□□ -0.95
TRAV35-201ENST00000390462 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
TRAV35-201ENST00000390462 C3orf80F5H4A9 247 aa9.11□□□□□ -0.95
TRAV35-201ENST00000390462 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
TRAV35-201ENST00000390462 GCGRP47871 477 aa9.11□□□□□ -0.95
TRAV35-201ENST00000390462 ZNF592Q92610 1267 aa9.11□□□□□ -0.95
TRAV35-201ENST00000390462 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms