RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 BCL9LQ86UU0 1499 aa24.4■■□□□ 1.5
IGKV4-1-201ENST00000390243 SOCS7O14512 581 aa24.4■■□□□ 1.5
IGKV4-1-201ENST00000390243 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
IGKV4-1-201ENST00000390243 SLIT2O94813 1529 aa24.39■■□□□ 1.49
IGKV4-1-201ENST00000390243 EVC2Q86UK5 1308 aa24.38■■□□□ 1.49
IGKV4-1-201ENST00000390243 CD163L1Q9NR16 1453 aa24.38■■□□□ 1.49
IGKV4-1-201ENST00000390243 USP6P35125 1406 aa24.37■■□□□ 1.49
IGKV4-1-201ENST00000390243 TESK2Q96S53 571 aa24.37■■□□□ 1.49
IGKV4-1-201ENST00000390243 USP47Q96K76 1375 aa24.37■■□□□ 1.49
IGKV4-1-201ENST00000390243 RGS12O14924 1447 aa24.36■■□□□ 1.49
IGKV4-1-201ENST00000390243 ATRNO75882 1429 aa24.36■■□□□ 1.49
IGKV4-1-201ENST00000390243 NWD2Q9ULI1 1742 aa24.36■■□□□ 1.49
IGKV4-1-201ENST00000390243 ZNF772Q68DY9 489 aaPredicted RBP24.36■■□□□ 1.49
IGKV4-1-201ENST00000390243 NGLY1Q96IV0 654 aa24.36■■□□□ 1.49
IGKV4-1-201ENST00000390243 CABP1Q9NZU7 370 aa24.36■■□□□ 1.49
IGKV4-1-201ENST00000390243 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
IGKV4-1-201ENST00000390243 GLI3P10071 1580 aa24.35■■□□□ 1.49
IGKV4-1-201ENST00000390243 PAK3O75914 559 aaPredicted RBP24.35■■□□□ 1.49
IGKV4-1-201ENST00000390243 NUTM2GQ5VZR2 741 aa24.35■■□□□ 1.49
IGKV4-1-201ENST00000390243 FNBP4Q8N3X1 1017 aaPredicted RBP24.34■■□□□ 1.49
IGKV4-1-201ENST00000390243 ST20-MTHFSA0A0A6YYL1 179 aa24.33■■□□□ 1.49
IGKV4-1-201ENST00000390243 COL14A1Q05707 1796 aaKnown RBP24.31■■□□□ 1.48
IGKV4-1-201ENST00000390243 CPSF1Q10570 1443 aaKnown RBP24.31■■□□□ 1.48
IGKV4-1-201ENST00000390243 USP21Q9UK80 565 aa24.31■■□□□ 1.48
IGKV4-1-201ENST00000390243 ATAD2Q6PL18 1390 aa24.3■■□□□ 1.48
IGKV4-1-201ENST00000390243 MYOM1P52179 1685 aa24.3■■□□□ 1.48
IGKV4-1-201ENST00000390243 CDK12Q9NYV4 1490 aaPredicted RBP24.28■■□□□ 1.48
IGKV4-1-201ENST00000390243 SLIT3O75094 1523 aa24.28■■□□□ 1.48
IGKV4-1-201ENST00000390243 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
IGKV4-1-201ENST00000390243 QTRT2Q9H974 415 aaKnown RBP24.27■■□□□ 1.48
IGKV4-1-201ENST00000390243 USP19O94966 1318 aa24.27■■□□□ 1.48
IGKV4-1-201ENST00000390243 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
IGKV4-1-201ENST00000390243 USP54Q70EL1 1684 aa24.25■■□□□ 1.47
IGKV4-1-201ENST00000390243 TIMELESSQ9UNS1 1208 aa24.25■■□□□ 1.47
IGKV4-1-201ENST00000390243 FAM83GA6ND36 823 aa24.24■■□□□ 1.47
IGKV4-1-201ENST00000390243 RXRBP28702 533 aa24.24■■□□□ 1.47
IGKV4-1-201ENST00000390243 KIAA0232Q92628 1395 aa24.24■■□□□ 1.47
IGKV4-1-201ENST00000390243 BRWD3Q6RI45 1802 aa24.22■■□□□ 1.47
IGKV4-1-201ENST00000390243 A0A1W2PP64 1363 aa24.22■■□□□ 1.47
IGKV4-1-201ENST00000390243 RBM6P78332 1123 aaKnown RBP24.21■■□□□ 1.47
IGKV4-1-201ENST00000390243 ABTB2Q8N961 1025 aa24.21■■□□□ 1.47
IGKV4-1-201ENST00000390243 SLC12A5Q9H2X9 1139 aa24.21■■□□□ 1.47
IGKV4-1-201ENST00000390243 TTC21BQ7Z4L5 1316 aa24.2■■□□□ 1.46
IGKV4-1-201ENST00000390243 UNC5CLQ8IV45 518 aa24.2■■□□□ 1.46
IGKV4-1-201ENST00000390243 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
IGKV4-1-201ENST00000390243 KTN1Q86UP2 1357 aaKnown RBP24.19■■□□□ 1.46
IGKV4-1-201ENST00000390243 CHRNA2Q15822 529 aa24.19■■□□□ 1.46
IGKV4-1-201ENST00000390243 NFAT5O94916 1531 aa24.19■■□□□ 1.46
IGKV4-1-201ENST00000390243 COL18A1P39060 1754 aa24.19■■□□□ 1.46
IGKV4-1-201ENST00000390243 CAMTA1Q9Y6Y1 1673 aa24.18■■□□□ 1.46
IGKV4-1-201ENST00000390243 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
IGKV4-1-201ENST00000390243 BRD4O60885 1362 aaPredicted RBP24.17■■□□□ 1.46
IGKV4-1-201ENST00000390243 ZC3H6P61129 1189 aaKnown RBP24.17■■□□□ 1.46
IGKV4-1-201ENST00000390243 TMC1Q8TDI8 760 aa24.16■■□□□ 1.46
IGKV4-1-201ENST00000390243 RGPD5Q99666 1765 aa24.16■■□□□ 1.46
IGKV4-1-201ENST00000390243 EP400Q96L91 3159 aa24.15■■□□□ 1.46
IGKV4-1-201ENST00000390243 PRDM11Q9NQV5 511 aa24.15■■□□□ 1.46
IGKV4-1-201ENST00000390243 BTG4Q9NY30 223 aa24.15■■□□□ 1.46
IGKV4-1-201ENST00000390243 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
IGKV4-1-201ENST00000390243 CPDO75976 1380 aa24.13■■□□□ 1.45
IGKV4-1-201ENST00000390243 THSD7AQ9UPZ6 1657 aa24.12■■□□□ 1.45
IGKV4-1-201ENST00000390243 EDC4Q6P2E9 1401 aaKnown RBP24.12■■□□□ 1.45
IGKV4-1-201ENST00000390243 NME9Q86XW9 330 aa24.12■■□□□ 1.45
IGKV4-1-201ENST00000390243 LTN1O94822 1766 aa24.11■■□□□ 1.45
IGKV4-1-201ENST00000390243 GCP02774 474 aa24.11■■□□□ 1.45
IGKV4-1-201ENST00000390243 NLRP6P59044 892 aa24.11■■□□□ 1.45
IGKV4-1-201ENST00000390243 VPS72Q15906 364 aa24.11■■□□□ 1.45
IGKV4-1-201ENST00000390243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.11■■□□□ 1.45
IGKV4-1-201ENST00000390243 OVOS2A0A0J9YW53 1432 aa24.1■■□□□ 1.45
IGKV4-1-201ENST00000390243 OVOS2Q6IE36 1432 aa24.1■■□□□ 1.45
IGKV4-1-201ENST00000390243 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
IGKV4-1-201ENST00000390243 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
IGKV4-1-201ENST00000390243 PUS7Q96PZ0 661 aaKnown RBP24.09■■□□□ 1.45
IGKV4-1-201ENST00000390243 COL5A2P05997 1499 aaPredicted RBP24.08■■□□□ 1.45
IGKV4-1-201ENST00000390243 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
IGKV4-1-201ENST00000390243 TMF1P82094 1093 aa24.08■■□□□ 1.45
IGKV4-1-201ENST00000390243 ZNF692Q9BU19 519 aaPredicted RBP24.08■■□□□ 1.45
IGKV4-1-201ENST00000390243 KIF20BQ96Q89 1820 aa24.07■■□□□ 1.44
IGKV4-1-201ENST00000390243 ANKRD36BQ8N2N9 1353 aa24.07■■□□□ 1.44
IGKV4-1-201ENST00000390243 SOX12O15370 315 aa24.07■■□□□ 1.44
IGKV4-1-201ENST00000390243 USP31Q70CQ4 1352 aa24.06■■□□□ 1.44
IGKV4-1-201ENST00000390243 NINLQ9Y2I6 1382 aa24.06■■□□□ 1.44
IGKV4-1-201ENST00000390243 WNK3Q9BYP7 1800 aa24.06■■□□□ 1.44
IGKV4-1-201ENST00000390243 CCDC9Q9Y3X0 531 aaKnown RBP24.04■■□□□ 1.44
IGKV4-1-201ENST00000390243 SPATA31A5Q5VU36 1347 aa24.04■■□□□ 1.44
IGKV4-1-201ENST00000390243 SPATA31A7Q8IWB4 1347 aa24.04■■□□□ 1.44
IGKV4-1-201ENST00000390243 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
IGKV4-1-201ENST00000390243 HDGFL2Q7Z4V5 671 aaPredicted RBP24.03■■□□□ 1.44
IGKV4-1-201ENST00000390243 STRN4Q9NRL3 753 aa24.03■■□□□ 1.44
IGKV4-1-201ENST00000390243 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.44
IGKV4-1-201ENST00000390243 TERF2IPQ9NYB0 399 aa24.01■■□□□ 1.43
IGKV4-1-201ENST00000390243 FAM98CQ17RN3 349 aaKnown RBP24■■□□□ 1.43
IGKV4-1-201ENST00000390243 LARP1Q6PKG0 1096 aaKnown RBP24■■□□□ 1.43
IGKV4-1-201ENST00000390243 AXIN2Q9Y2T1 843 aa24■■□□□ 1.43
IGKV4-1-201ENST00000390243 AATKQ6ZMQ8 1374 aa24■■□□□ 1.43
IGKV4-1-201ENST00000390243 SPATA31A1Q5TZJ5 1347 aa23.99■■□□□ 1.43
IGKV4-1-201ENST00000390243 C11orf95C9JLR9 678 aaPredicted RBP23.98■■□□□ 1.43
IGKV4-1-201ENST00000390243 EIF4G2P78344 907 aaKnown RBP eCLIP23.98■■□□□ 1.43
IGKV4-1-201ENST00000390243 ARHGEF25Q86VW2 580 aa23.98■■□□□ 1.43
IGKV4-1-201ENST00000390243 SEPT12Q8IYM1 358 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms