RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
SOD1-202ENST00000389995 TRIM37O94972 964 aa17.64■□□□□ 0.41
SOD1-202ENST00000389995 POGKQ9P215 609 aa17.64■□□□□ 0.41
SOD1-202ENST00000389995 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
SOD1-202ENST00000389995 NUP188Q5SRE5 1749 aa17.62■□□□□ 0.41
SOD1-202ENST00000389995 MINK1Q8N4C8 1332 aaPredicted RBP17.62■□□□□ 0.41
SOD1-202ENST00000389995 PRR36Q9H6K5 1346 aa17.62■□□□□ 0.41
SOD1-202ENST00000389995 DISP2A7MBM2 1401 aa17.62■□□□□ 0.41
SOD1-202ENST00000389995 RREB1Q92766 1687 aa17.61■□□□□ 0.41
SOD1-202ENST00000389995 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
SOD1-202ENST00000389995 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
SOD1-202ENST00000389995 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
SOD1-202ENST00000389995 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
SOD1-202ENST00000389995 TRAK1Q9UPV9 953 aa17.6■□□□□ 0.41
SOD1-202ENST00000389995 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
SOD1-202ENST00000389995 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
SOD1-202ENST00000389995 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
SOD1-202ENST00000389995 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
SOD1-202ENST00000389995 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
SOD1-202ENST00000389995 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
SOD1-202ENST00000389995 APBA3O96018 575 aa17.58■□□□□ 0.4
SOD1-202ENST00000389995 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
SOD1-202ENST00000389995 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
SOD1-202ENST00000389995 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
SOD1-202ENST00000389995 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
SOD1-202ENST00000389995 ITSN1Q15811 1721 aa17.56■□□□□ 0.4
SOD1-202ENST00000389995 YY1P25490 414 aa17.56■□□□□ 0.4
SOD1-202ENST00000389995 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
SOD1-202ENST00000389995 ZC3H6P61129 1189 aaKnown RBP17.55■□□□□ 0.4
SOD1-202ENST00000389995 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
SOD1-202ENST00000389995 FAM196AQ6ZSG2 479 aa17.55■□□□□ 0.4
SOD1-202ENST00000389995 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
SOD1-202ENST00000389995 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
SOD1-202ENST00000389995 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
SOD1-202ENST00000389995 UTRNP46939 3433 aa17.51■□□□□ 0.39
SOD1-202ENST00000389995 SBF2Q86WG5 1849 aa17.5■□□□□ 0.39
SOD1-202ENST00000389995 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
SOD1-202ENST00000389995 PDE3BQ13370 1112 aa17.49■□□□□ 0.39
SOD1-202ENST00000389995 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
SOD1-202ENST00000389995 SSH2Q76I76 1423 aa17.48■□□□□ 0.39
SOD1-202ENST00000389995 EVA1CP58658 441 aa17.48■□□□□ 0.39
SOD1-202ENST00000389995 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
SOD1-202ENST00000389995 PARD3Q8TEW0 1356 aa17.48■□□□□ 0.39
SOD1-202ENST00000389995 ATP7BP35670 1465 aa17.48■□□□□ 0.39
SOD1-202ENST00000389995 NUDT16Q96DE0 195 aaKnown RBP17.47■□□□□ 0.39
SOD1-202ENST00000389995 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
SOD1-202ENST00000389995 NRKQ7Z2Y5 1582 aa17.47■□□□□ 0.39
SOD1-202ENST00000389995 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.39
SOD1-202ENST00000389995 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
SOD1-202ENST00000389995 NBPF8Q3BBV2 869 aa17.46■□□□□ 0.39
SOD1-202ENST00000389995 NBPF14Q5TI25 921 aa17.46■□□□□ 0.39
SOD1-202ENST00000389995 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
SOD1-202ENST00000389995 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
SOD1-202ENST00000389995 SPON1Q9HCB6 807 aa17.44■□□□□ 0.38
SOD1-202ENST00000389995 KCNQ2O43526 872 aa17.43■□□□□ 0.38
SOD1-202ENST00000389995 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
SOD1-202ENST00000389995 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
SOD1-202ENST00000389995 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
SOD1-202ENST00000389995 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
SOD1-202ENST00000389995 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
SOD1-202ENST00000389995 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
SOD1-202ENST00000389995 ACEP12821 1306 aa17.41■□□□□ 0.38
SOD1-202ENST00000389995 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
SOD1-202ENST00000389995 MYOM1P52179 1685 aa17.39■□□□□ 0.37
SOD1-202ENST00000389995 RGPD3A6NKT7 1758 aaPredicted RBP17.39■□□□□ 0.37
SOD1-202ENST00000389995 RGPD4Q7Z3J3 1758 aa17.39■□□□□ 0.37
SOD1-202ENST00000389995 RGPD5Q99666 1765 aa17.39■□□□□ 0.37
SOD1-202ENST00000389995 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
SOD1-202ENST00000389995 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
SOD1-202ENST00000389995 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
SOD1-202ENST00000389995 ZBTB7CA1YPR0 619 aa17.38■□□□□ 0.37
SOD1-202ENST00000389995 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
SOD1-202ENST00000389995 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
SOD1-202ENST00000389995 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
SOD1-202ENST00000389995 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
SOD1-202ENST00000389995 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
SOD1-202ENST00000389995 CHD4Q14839 1912 aa17.37■□□□□ 0.37
SOD1-202ENST00000389995 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
SOD1-202ENST00000389995 CPDO75976 1380 aa17.35■□□□□ 0.37
SOD1-202ENST00000389995 USP19O94966 1318 aa17.34■□□□□ 0.37
SOD1-202ENST00000389995 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
SOD1-202ENST00000389995 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
SOD1-202ENST00000389995 THRAP3Q9Y2W1 955 aaKnown RBP17.34■□□□□ 0.37
SOD1-202ENST00000389995 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.37
SOD1-202ENST00000389995 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.36
SOD1-202ENST00000389995 OVOS2A0A0J9YW53 1432 aa17.33■□□□□ 0.36
SOD1-202ENST00000389995 OVOS2Q6IE36 1432 aa17.33■□□□□ 0.36
SOD1-202ENST00000389995 GCP02774 474 aa17.33■□□□□ 0.36
SOD1-202ENST00000389995 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
SOD1-202ENST00000389995 COL18A1P39060 1754 aa17.33■□□□□ 0.36
SOD1-202ENST00000389995 CRB1P82279 1406 aa17.32■□□□□ 0.36
SOD1-202ENST00000389995 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
SOD1-202ENST00000389995 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
SOD1-202ENST00000389995 PROM2Q8N271 834 aa17.31■□□□□ 0.36
SOD1-202ENST00000389995 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
SOD1-202ENST00000389995 PLSCR1O15162 318 aa17.3■□□□□ 0.36
SOD1-202ENST00000389995 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
SOD1-202ENST00000389995 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
SOD1-202ENST00000389995 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
SOD1-202ENST00000389995 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms