RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SALL2Q9Y467 1007 aaPredicted RBP16.31■□□□□ 0.2
SPTBN1-203ENST00000389980 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
SPTBN1-203ENST00000389980 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
SPTBN1-203ENST00000389980 USP6P35125 1406 aa16.29■□□□□ 0.2
SPTBN1-203ENST00000389980 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
SPTBN1-203ENST00000389980 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
SPTBN1-203ENST00000389980 NRKQ7Z2Y5 1582 aa16.29■□□□□ 0.2
SPTBN1-203ENST00000389980 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
SPTBN1-203ENST00000389980 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
SPTBN1-203ENST00000389980 MAP2P11137 1827 aaKnown RBP16.27■□□□□ 0.2
SPTBN1-203ENST00000389980 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.19
SPTBN1-203ENST00000389980 COG3Q96JB2 828 aa16.26■□□□□ 0.19
SPTBN1-203ENST00000389980 CFAP53Q96M91 514 aa16.25■□□□□ 0.19
SPTBN1-203ENST00000389980 TMEM94Q12767 1356 aa16.25■□□□□ 0.19
SPTBN1-203ENST00000389980 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
SPTBN1-203ENST00000389980 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
SPTBN1-203ENST00000389980 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
SPTBN1-203ENST00000389980 PHF8Q9UPP1 1060 aa16.24■□□□□ 0.19
SPTBN1-203ENST00000389980 POLKQ9UBT6 870 aa16.23■□□□□ 0.19
SPTBN1-203ENST00000389980 INSRP06213 1382 aa16.23■□□□□ 0.19
SPTBN1-203ENST00000389980 ORAI2Q96SN7 254 aa16.23■□□□□ 0.19
SPTBN1-203ENST00000389980 EMILIN1Q9Y6C2 1016 aa16.23■□□□□ 0.19
SPTBN1-203ENST00000389980 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
SPTBN1-203ENST00000389980 RRS1Q15050 365 aaKnown RBP16.21■□□□□ 0.19
SPTBN1-203ENST00000389980 SOX12O15370 315 aa16.21■□□□□ 0.19
SPTBN1-203ENST00000389980 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.18
SPTBN1-203ENST00000389980 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
SPTBN1-203ENST00000389980 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
SPTBN1-203ENST00000389980 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
SPTBN1-203ENST00000389980 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
SPTBN1-203ENST00000389980 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
SPTBN1-203ENST00000389980 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
SPTBN1-203ENST00000389980 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
SPTBN1-203ENST00000389980 APAF1O14727 1248 aa16.19■□□□□ 0.18
SPTBN1-203ENST00000389980 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
SPTBN1-203ENST00000389980 U2AF1L5P0DN76 240 aaPredicted RBP16.19■□□□□ 0.18
SPTBN1-203ENST00000389980 U2AF1Q01081 240 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPTBN1-203ENST00000389980 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
SPTBN1-203ENST00000389980 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
SPTBN1-203ENST00000389980 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
SPTBN1-203ENST00000389980 FOXO3O43524 673 aa16.17■□□□□ 0.18
SPTBN1-203ENST00000389980 ATF3P18847 181 aa16.17■□□□□ 0.18
SPTBN1-203ENST00000389980 AATKQ6ZMQ8 1374 aa16.17■□□□□ 0.18
SPTBN1-203ENST00000389980 C1orf167Q5SNV9 1468 aa16.17■□□□□ 0.18
SPTBN1-203ENST00000389980 PSME1Q06323 249 aa16.17■□□□□ 0.18
SPTBN1-203ENST00000389980 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
SPTBN1-203ENST00000389980 NLRP6P59044 892 aa16.16■□□□□ 0.18
SPTBN1-203ENST00000389980 CDCA7LQ96GN5 454 aa16.16■□□□□ 0.18
SPTBN1-203ENST00000389980 SUPT16HQ9Y5B9 1047 aaKnown RBP16.16■□□□□ 0.18
SPTBN1-203ENST00000389980 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
SPTBN1-203ENST00000389980 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
SPTBN1-203ENST00000389980 MST1RQ04912 1400 aa16.14■□□□□ 0.17
SPTBN1-203ENST00000389980 SMG6Q86US8 1419 aaKnown RBP16.14■□□□□ 0.17
SPTBN1-203ENST00000389980 USP31Q70CQ4 1352 aa16.14■□□□□ 0.17
SPTBN1-203ENST00000389980 MARF1Q9Y4F3 1742 aaKnown RBP16.14■□□□□ 0.17
SPTBN1-203ENST00000389980 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
SPTBN1-203ENST00000389980 NCOA3Q9Y6Q9 1424 aa16.13■□□□□ 0.17
SPTBN1-203ENST00000389980 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
SPTBN1-203ENST00000389980 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
SPTBN1-203ENST00000389980 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
SPTBN1-203ENST00000389980 CDK12Q9NYV4 1490 aaPredicted RBP16.12■□□□□ 0.17
SPTBN1-203ENST00000389980 MSH6P52701 1360 aa16.12■□□□□ 0.17
SPTBN1-203ENST00000389980 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
SPTBN1-203ENST00000389980 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
SPTBN1-203ENST00000389980 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
SPTBN1-203ENST00000389980 DCCP43146 1447 aa16.11■□□□□ 0.17
SPTBN1-203ENST00000389980 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
SPTBN1-203ENST00000389980 TCP11L2Q8N4U5 519 aa16.11■□□□□ 0.17
SPTBN1-203ENST00000389980 IL13P35225 146 aa16.1■□□□□ 0.17
SPTBN1-203ENST00000389980 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
SPTBN1-203ENST00000389980 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
SPTBN1-203ENST00000389980 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 KIF1AQ12756 1690 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 HMOX1P09601 288 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 PLEKHF1Q96S99 279 aa16.09■□□□□ 0.17
SPTBN1-203ENST00000389980 IQSEC2Q5JU85 1478 aa16.08■□□□□ 0.17
SPTBN1-203ENST00000389980 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
SPTBN1-203ENST00000389980 FKBP8Q14318 412 aa16.07■□□□□ 0.16
SPTBN1-203ENST00000389980 USP54Q70EL1 1684 aa16.07■□□□□ 0.16
SPTBN1-203ENST00000389980 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-203ENST00000389980 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
SPTBN1-203ENST00000389980 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
SPTBN1-203ENST00000389980 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
SPTBN1-203ENST00000389980 AMPHP49418 695 aa16.06■□□□□ 0.16
SPTBN1-203ENST00000389980 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
SPTBN1-203ENST00000389980 RSPH6AQ9H0K4 717 aa16.06■□□□□ 0.16
SPTBN1-203ENST00000389980 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
SPTBN1-203ENST00000389980 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
SPTBN1-203ENST00000389980 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
SPTBN1-203ENST00000389980 SBNO1A3KN83 1393 aa16.04■□□□□ 0.16
SPTBN1-203ENST00000389980 FCHSD2O94868 740 aa16.04■□□□□ 0.16
SPTBN1-203ENST00000389980 NEFLP07196 543 aa16.03■□□□□ 0.16
SPTBN1-203ENST00000389980 FLT4P35916 1363 aa16.03■□□□□ 0.16
SPTBN1-203ENST00000389980 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
SPTBN1-203ENST00000389980 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
SPTBN1-203ENST00000389980 LTN1O94822 1766 aa16.03■□□□□ 0.16
SPTBN1-203ENST00000389980 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms