RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
MIR548A3-201ENST00000385297 SPRYD3Q8NCJ5 442 aa4.59□□□□□ -1.67
MIR548A3-201ENST00000385297 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
MIR548A3-201ENST00000385297 DNMT3LQ9UJW3 386 aa4.59□□□□□ -1.67
MIR548A3-201ENST00000385297 CD46P15529 392 aa4.58□□□□□ -1.68
MIR548A3-201ENST00000385297 DCAF5Q96JK2 942 aa4.58□□□□□ -1.68
MIR548A3-201ENST00000385297 K7ELQ4 463 aaPredicted RBP4.57□□□□□ -1.68
MIR548A3-201ENST00000385297 GNPATO15228 680 aa4.57□□□□□ -1.68
MIR548A3-201ENST00000385297 KDM4AO75164 1064 aa4.57□□□□□ -1.68
MIR548A3-201ENST00000385297 USP46P62068 366 aa4.57□□□□□ -1.68
MIR548A3-201ENST00000385297 C6orf118Q5T5N4 469 aa4.57□□□□□ -1.68
MIR548A3-201ENST00000385297 ZFAND3Q9H8U3 227 aa4.57□□□□□ -1.68
MIR548A3-201ENST00000385297 ZIC2O95409 532 aaPredicted RBP4.56□□□□□ -1.68
MIR548A3-201ENST00000385297 LINC00528Q8N1L1 170 aa4.56□□□□□ -1.68
MIR548A3-201ENST00000385297 HLA-CQ95604 372 aa4.56□□□□□ -1.68
MIR548A3-201ENST00000385297 CDK15Q96Q40 435 aa4.56□□□□□ -1.68
MIR548A3-201ENST00000385297 GPR37O15354 613 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 HOXA2O43364 376 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 CCNYL3P0C7X3 344 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 BMP2P12643 396 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 MEIOBQ8N635 442 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 ZNF511Q8NB15 262 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 ITPKCQ96DU7 683 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 UNC93B1Q9H1C4 597 aa4.55□□□□□ -1.68
MIR548A3-201ENST00000385297 PTSQ03393 145 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 LINC01559Q495D7 138 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 LYPD4Q6UWN0 246 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 RETREG3Q86VR2 466 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 KCNV2Q8TDN2 545 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 BAP1Q92560 729 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
MIR548A3-201ENST00000385297 CCDC155Q8N6L0 562 aa4.53□□□□□ -1.68
MIR548A3-201ENST00000385297 SYMPKQ92797 1274 aaKnown RBP4.53□□□□□ -1.68
MIR548A3-201ENST00000385297 EVA1BQ9NVM1 165 aa4.53□□□□□ -1.68
MIR548A3-201ENST00000385297 SLC35F4A4IF30 521 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 PHF20L1A8MW92 1017 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 UPP2O95045 317 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 ADAMTS2O95450 1211 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 NR3C2P08235 984 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 NR5A1Q13285 461 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 PTPRNQ16849 979 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 GALNT6Q8NCL4 622 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 FAM174AQ8TBP5 190 aa4.52□□□□□ -1.69
MIR548A3-201ENST00000385297 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
MIR548A3-201ENST00000385297 CELA2BP08218 269 aaPredicted RBP4.51□□□□□ -1.69
MIR548A3-201ENST00000385297 MS4A1P11836 297 aa4.51□□□□□ -1.69
MIR548A3-201ENST00000385297 GUCA2AQ02747 115 aa4.51□□□□□ -1.69
MIR548A3-201ENST00000385297 SRSF11Q05519 484 aaKnown RBP4.51□□□□□ -1.69
MIR548A3-201ENST00000385297 KCNH2Q12809 1159 aa4.51□□□□□ -1.69
MIR548A3-201ENST00000385297 TTLL8A6PVC2 850 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 SPTLC1O15269 473 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 ITGA6P23229 1130 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 GRM5P41594 1212 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 BAG6P46379 1132 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 MAP3K10Q02779 954 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 SV2AQ7L0J3 742 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 VWA5B2Q8N398 1253 aa4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 TSEN34Q9BSV6 310 aaKnown RBP4.5□□□□□ -1.69
MIR548A3-201ENST00000385297 CNTNAP5Q8WYK1 1306 aa4.49□□□□□ -1.69
MIR548A3-201ENST00000385297 ENAMQ9NRM1 1142 aa4.49□□□□□ -1.69
MIR548A3-201ENST00000385297 SEMA3EO15041 775 aa4.48□□□□□ -1.69
MIR548A3-201ENST00000385297 RBM26Q5T8P6 1007 aaKnown RBP4.48□□□□□ -1.69
MIR548A3-201ENST00000385297 BEND7Q8N7W2 519 aaPredicted RBP4.48□□□□□ -1.69
MIR548A3-201ENST00000385297 BTBD11A6QL63 1104 aa4.47□□□□□ -1.69
MIR548A3-201ENST00000385297 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.47□□□□□ -1.69
MIR548A3-201ENST00000385297 GAS6Q14393 721 aa4.46□□□□□ -1.7
MIR548A3-201ENST00000385297 PCDHGC3Q9UN70 934 aa4.46□□□□□ -1.7
MIR548A3-201ENST00000385297 CDC14CA4D256 554 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 FIGNL2A6NMB9 653 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 SPINT1O43278 529 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 FURINP09958 794 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 ARID5BQ14865 1188 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 DESI1Q6ICB0 168 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 SH3RF1Q7Z6J0 888 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 FOXJ1Q92949 421 aa4.45□□□□□ -1.7
MIR548A3-201ENST00000385297 KRBA1A5PL33 1030 aa4.44□□□□□ -1.7
MIR548A3-201ENST00000385297 C4orf48Q5BLP8 95 aa4.44□□□□□ -1.7
MIR548A3-201ENST00000385297 PODNQ7Z5L7 613 aa4.44□□□□□ -1.7
MIR548A3-201ENST00000385297 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
MIR548A3-201ENST00000385297 SENP3-EIF4A1A0A087X0R7 540 aa4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 TESPA1A2RU30 521 aaPredicted RBP4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 C6orf229H3BNL8 230 aa4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 FDX1P10109 184 aa4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 ITGB7P26010 798 aa4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 PAXIP1Q6ZW49 1069 aaPredicted RBP4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 LRRC4BQ9NT99 713 aa4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 EMILIN1Q9Y6C2 1016 aa4.43□□□□□ -1.7
MIR548A3-201ENST00000385297 BCRP11274 1271 aa4.42□□□□□ -1.7
MIR548A3-201ENST00000385297 Q6ZVU0 165 aa4.42□□□□□ -1.7
MIR548A3-201ENST00000385297 ALYREFQ86V81 257 aaKnown RBP4.42□□□□□ -1.7
MIR548A3-201ENST00000385297 CFAP44Q96MT7 982 aa4.42□□□□□ -1.7
MIR548A3-201ENST00000385297 C1QTNF2Q9BXJ5 285 aa4.42□□□□□ -1.7
MIR548A3-201ENST00000385297 MAP4K5Q9Y4K4 846 aa4.42□□□□□ -1.7
MIR548A3-201ENST00000385297 PRR7Q8TB68 274 aa4.41□□□□□ -1.7
MIR548A3-201ENST00000385297 FSHRP23945 695 aa4.4□□□□□ -1.71
MIR548A3-201ENST00000385297 MDM2Q00987 491 aaPredicted RBP4.4□□□□□ -1.71
MIR548A3-201ENST00000385297 SMYD5Q6GMV2 418 aa4.4□□□□□ -1.71
MIR548A3-201ENST00000385297 MBIPQ9NS73 344 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms