RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 GGNBP2Q9H3C7 697 aa25.36■■□□□ 1.65
GMDS-201ENST00000380805 PNPLA6Q8IY17 1366 aa25.36■■□□□ 1.65
GMDS-201ENST00000380805 XRN1Q8IZH2 1706 aaKnown RBP25.35■■□□□ 1.65
GMDS-201ENST00000380805 RUNDC1Q96C34 613 aa25.35■■□□□ 1.65
GMDS-201ENST00000380805 TBX22Q9Y458 520 aa25.34■■□□□ 1.65
GMDS-201ENST00000380805 NPHP4O75161 1426 aaPredicted RBP25.34■■□□□ 1.65
GMDS-201ENST00000380805 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
GMDS-201ENST00000380805 NRKQ7Z2Y5 1582 aa25.33■■□□□ 1.65
GMDS-201ENST00000380805 SLC26A8Q96RN1 970 aa25.33■■□□□ 1.65
GMDS-201ENST00000380805 NUDT16Q96DE0 195 aaKnown RBP25.32■■□□□ 1.64
GMDS-201ENST00000380805 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
GMDS-201ENST00000380805 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
GMDS-201ENST00000380805 NKTRP30414 1462 aaKnown RBP25.31■■□□□ 1.64
GMDS-201ENST00000380805 E9PSI1 815 aa25.3■■□□□ 1.64
GMDS-201ENST00000380805 CCDC27Q2M243 656 aa25.29■■□□□ 1.64
GMDS-201ENST00000380805 PRR36Q9H6K5 1346 aa25.28■■□□□ 1.64
GMDS-201ENST00000380805 MAP2P11137 1827 aaKnown RBP25.28■■□□□ 1.64
GMDS-201ENST00000380805 WWC1Q8IX03 1113 aa25.27■■□□□ 1.64
GMDS-201ENST00000380805 PIK3R4Q99570 1358 aa25.27■■□□□ 1.64
GMDS-201ENST00000380805 AATKQ6ZMQ8 1374 aa25.25■■□□□ 1.63
GMDS-201ENST00000380805 TCP11L2Q8N4U5 519 aa25.25■■□□□ 1.63
GMDS-201ENST00000380805 SPINK5Q9NQ38 1064 aaPredicted RBP25.25■■□□□ 1.63
GMDS-201ENST00000380805 ZNF692Q9BU19 519 aaPredicted RBP25.24■■□□□ 1.63
GMDS-201ENST00000380805 DMRT2Q9Y5R5 561 aa25.22■■□□□ 1.63
GMDS-201ENST00000380805 CDK12Q9NYV4 1490 aaPredicted RBP25.22■■□□□ 1.63
GMDS-201ENST00000380805 WDR63Q8IWG1 891 aa25.21■■□□□ 1.63
GMDS-201ENST00000380805 PLEKHG3A1L390 1219 aa25.2■■□□□ 1.63
GMDS-201ENST00000380805 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.63
GMDS-201ENST00000380805 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.63
GMDS-201ENST00000380805 CCDC136Q96JN2 1154 aa25.2■■□□□ 1.63
GMDS-201ENST00000380805 AMOTL2Q9Y2J4 779 aa25.2■■□□□ 1.63
GMDS-201ENST00000380805 NALCNQ8IZF0 1738 aa25.2■■□□□ 1.62
GMDS-201ENST00000380805 PLEKHF1Q96S99 279 aa25.2■■□□□ 1.62
GMDS-201ENST00000380805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.19■■□□□ 1.623e-7■■□□□ 13.3
GMDS-201ENST00000380805 EXOC6Q8TAG9 804 aa25.19■■□□□ 1.62
GMDS-201ENST00000380805 POLKQ9UBT6 870 aa25.18■■□□□ 1.62
GMDS-201ENST00000380805 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
GMDS-201ENST00000380805 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
GMDS-201ENST00000380805 SSH2Q76I76 1423 aa25.16■■□□□ 1.62
GMDS-201ENST00000380805 LRRC7Q96NW7 1537 aa25.15■■□□□ 1.62
GMDS-201ENST00000380805 USP6P35125 1406 aa25.15■■□□□ 1.62
GMDS-201ENST00000380805 NME9Q86XW9 330 aa25.15■■□□□ 1.62
GMDS-201ENST00000380805 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.62
GMDS-201ENST00000380805 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.14■■□□□ 1.61
GMDS-201ENST00000380805 OVOS2A0A0J9YW53 1432 aa25.14■■□□□ 1.61
GMDS-201ENST00000380805 OVOS2Q6IE36 1432 aa25.14■■□□□ 1.61
GMDS-201ENST00000380805 ANKARQ7Z5J8 1434 aa25.13■■□□□ 1.61
GMDS-201ENST00000380805 PNNQ9H307 717 aaKnown RBP25.13■■□□□ 1.61
GMDS-201ENST00000380805 PLIN1O60240 522 aa25.12■■□□□ 1.61
GMDS-201ENST00000380805 ZNF335Q9H4Z2 1342 aaPredicted RBP25.12■■□□□ 1.61
GMDS-201ENST00000380805 RGPD8O14715 1765 aaPredicted RBP25.12■■□□□ 1.61
GMDS-201ENST00000380805 COG3Q96JB2 828 aa25.11■■□□□ 1.61
GMDS-201ENST00000380805 RRP7AQ9Y3A4 280 aaKnown RBP25.11■■□□□ 1.61
GMDS-201ENST00000380805 U2SURPO15042 1029 aaKnown RBP25.1■■□□□ 1.61
GMDS-201ENST00000380805 ACEP12821 1306 aa25.1■■□□□ 1.61
GMDS-201ENST00000380805 FCHSD2O94868 740 aa25.09■■□□□ 1.61
GMDS-201ENST00000380805 TTC21BQ7Z4L5 1316 aa25.09■■□□□ 1.61
GMDS-201ENST00000380805 STRCP1A6NGW2 1772 aa25.09■■□□□ 1.61
GMDS-201ENST00000380805 KCNA6P17658 529 aa25.08■■□□□ 1.61
GMDS-201ENST00000380805 CRBNQ96SW2 442 aa25.08■■□□□ 1.61
GMDS-201ENST00000380805 USP54Q70EL1 1684 aa25.08■■□□□ 1.6
GMDS-201ENST00000380805 TMPOP42166 694 aaKnown RBP25.07■■□□□ 1.6
GMDS-201ENST00000380805 MAPK8IP3Q9UPT6 1336 aa25.06■■□□□ 1.6
GMDS-201ENST00000380805 NEUROD2Q15784 382 aa25.06■■□□□ 1.6
GMDS-201ENST00000380805 USP31Q70CQ4 1352 aa25.06■■□□□ 1.6
GMDS-201ENST00000380805 IL16Q14005 1332 aa25.06■■□□□ 1.6
GMDS-201ENST00000380805 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
GMDS-201ENST00000380805 RBM19Q9Y4C8 960 aaKnown RBP25.06■■□□□ 1.6
GMDS-201ENST00000380805 C20orf194Q5TEA3 1177 aa25.05■■□□□ 1.6
GMDS-201ENST00000380805 TTC21AQ8NDW8 1320 aa25.04■■□□□ 1.6
GMDS-201ENST00000380805 IL13P35225 146 aa25.04■■□□□ 1.6
GMDS-201ENST00000380805 RSPH6AQ9H0K4 717 aa25.04■■□□□ 1.6
GMDS-201ENST00000380805 MYH16Q9H6N6 1097 aa25.04■■□□□ 1.6
GMDS-201ENST00000380805 EMILIN1Q9Y6C2 1016 aa25.04■■□□□ 1.6
GMDS-201ENST00000380805 TRIM35Q9UPQ4 493 aa25.03■■□□□ 1.6
GMDS-201ENST00000380805 NWD1Q149M9 1564 aa25.02■■□□□ 1.6
GMDS-201ENST00000380805 RBM33Q96EV2 1170 aaKnown RBP25.02■■□□□ 1.6
GMDS-201ENST00000380805 FBLN1P23142 703 aa25.01■■□□□ 1.59
GMDS-201ENST00000380805 CT47B1P0C2W7 299 aaPredicted RBP25■■□□□ 1.59
GMDS-201ENST00000380805 PIK3C2AO00443 1686 aa25■■□□□ 1.59
GMDS-201ENST00000380805 RGPD1P0DJD0 1748 aa25■■□□□ 1.59
GMDS-201ENST00000380805 PEAK1Q9H792 1746 aa25■■□□□ 1.59
GMDS-201ENST00000380805 BCAR3O75815 825 aa24.99■■□□□ 1.59
GMDS-201ENST00000380805 PDE3AQ14432 1141 aa24.98■■□□□ 1.59
GMDS-201ENST00000380805 MARF1Q9Y4F3 1742 aaKnown RBP24.98■■□□□ 1.59
GMDS-201ENST00000380805 RARSP54136 660 aaKnown RBP24.97■■□□□ 1.59
GMDS-201ENST00000380805 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
GMDS-201ENST00000380805 PPM1GO15355 546 aaPredicted RBP24.96■■□□□ 1.59
GMDS-201ENST00000380805 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
GMDS-201ENST00000380805 PROSER2Q86WR7 435 aaPredicted RBP24.96■■□□□ 1.59
GMDS-201ENST00000380805 FANCIQ9NVI1 1328 aa24.95■■□□□ 1.58
GMDS-201ENST00000380805 DLG5Q8TDM6 1919 aa24.95■■□□□ 1.58
GMDS-201ENST00000380805 NUTM2FA1L443 756 aa24.95■■□□□ 1.58
GMDS-201ENST00000380805 RIPK4P57078 832 aa24.95■■□□□ 1.58
GMDS-201ENST00000380805 RRS1Q15050 365 aaKnown RBP24.94■■□□□ 1.58
GMDS-201ENST00000380805 ADGRL3Q9HAR2 1447 aa24.93■■□□□ 1.58
GMDS-201ENST00000380805 KDM2BQ8NHM5 1336 aa24.92■■□□□ 1.58
GMDS-201ENST00000380805 NFE2L2Q16236 605 aa24.92■■□□□ 1.58
GMDS-201ENST00000380805 NEFMP07197 916 aa24.91■■□□□ 1.58
GMDS-201ENST00000380805 TMEM94Q12767 1356 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms