RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 POLKQ9UBT6 870 aa13.79□□□□□ -0.2
DNMT3A-203ENST00000380746 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
DNMT3A-203ENST00000380746 PLXNC1O60486 1568 aa13.79□□□□□ -0.2
DNMT3A-203ENST00000380746 POLR3AO14802 1390 aaPredicted RBP13.79□□□□□ -0.2
DNMT3A-203ENST00000380746 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
DNMT3A-203ENST00000380746 UHRF1BP1LA0JNW5 1464 aa13.78□□□□□ -0.2
DNMT3A-203ENST00000380746 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
DNMT3A-203ENST00000380746 HSP90AB1P08238 724 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 A0A0U1RQG5 324 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 NOL8Q76FK4 1167 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 POGZQ7Z3K3 1410 aa13.77□□□□□ -0.21
DNMT3A-203ENST00000380746 MADDQ8WXG6 1647 aa13.76□□□□□ -0.21
DNMT3A-203ENST00000380746 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-203ENST00000380746 GSE1Q14687 1217 aa13.76□□□□□ -0.21
DNMT3A-203ENST00000380746 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
DNMT3A-203ENST00000380746 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 C22orf23Q9BZE7 217 aa13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-203ENST00000380746 NCLP19338 710 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-203ENST00000380746 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-203ENST00000380746 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
DNMT3A-203ENST00000380746 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
DNMT3A-203ENST00000380746 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
DNMT3A-203ENST00000380746 FOXO3O43524 673 aa13.73□□□□□ -0.21
DNMT3A-203ENST00000380746 NLRP6P59044 892 aa13.73□□□□□ -0.21
DNMT3A-203ENST00000380746 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
DNMT3A-203ENST00000380746 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
DNMT3A-203ENST00000380746 FCHSD2O94868 740 aa13.72□□□□□ -0.21
DNMT3A-203ENST00000380746 EID1Q9Y6B2 187 aa13.72□□□□□ -0.21
DNMT3A-203ENST00000380746 F6X3S4 739 aa13.72□□□□□ -0.21
DNMT3A-203ENST00000380746 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-203ENST00000380746 NFE2L2Q16236 605 aa13.72□□□□□ -0.21
DNMT3A-203ENST00000380746 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
DNMT3A-203ENST00000380746 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-203ENST00000380746 GNAI1P63096 354 aa13.71□□□□□ -0.21
DNMT3A-203ENST00000380746 SPHKAPQ2M3C7 1700 aa13.71□□□□□ -0.21
DNMT3A-203ENST00000380746 SHROOM2Q13796 1616 aa13.71□□□□□ -0.21
DNMT3A-203ENST00000380746 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-203ENST00000380746 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
DNMT3A-203ENST00000380746 KIF16BQ96L93 1317 aa13.71□□□□□ -0.22
DNMT3A-203ENST00000380746 FOXD4L6Q3SYB3 417 aaPredicted RBP13.71□□□□□ -0.22
DNMT3A-203ENST00000380746 FOXD4L3Q6VB84 417 aaPredicted RBP13.71□□□□□ -0.22
DNMT3A-203ENST00000380746 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
DNMT3A-203ENST00000380746 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-203ENST00000380746 INSRP06213 1382 aa13.7□□□□□ -0.22
DNMT3A-203ENST00000380746 ABCA6Q8N139 1617 aa13.7□□□□□ -0.22
DNMT3A-203ENST00000380746 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
DNMT3A-203ENST00000380746 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
DNMT3A-203ENST00000380746 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
DNMT3A-203ENST00000380746 TSHZ3Q63HK5 1081 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 CEP152O94986 1710 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 TET3O43151 1660 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 SYNMO15061 1565 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 EFCAB6Q5THR3 1501 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 PDE4CQ08493 712 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 MAP3K4Q9Y6R4 1608 aa13.68□□□□□ -0.22
DNMT3A-203ENST00000380746 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
DNMT3A-203ENST00000380746 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
DNMT3A-203ENST00000380746 ACEP12821 1306 aa13.67□□□□□ -0.22
DNMT3A-203ENST00000380746 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
DNMT3A-203ENST00000380746 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-203ENST00000380746 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-203ENST00000380746 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
DNMT3A-203ENST00000380746 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-203ENST00000380746 ABTB2Q8N961 1025 aa13.66□□□□□ -0.22
DNMT3A-203ENST00000380746 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
DNMT3A-203ENST00000380746 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
DNMT3A-203ENST00000380746 KIF1BO60333 1816 aa13.65□□□□□ -0.22
DNMT3A-203ENST00000380746 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
DNMT3A-203ENST00000380746 VAMP4O75379 141 aa13.65□□□□□ -0.22
DNMT3A-203ENST00000380746 METP08581 1390 aa13.65□□□□□ -0.22
DNMT3A-203ENST00000380746 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
DNMT3A-203ENST00000380746 RIMS2Q9UQ26 1411 aa13.65□□□□□ -0.22
DNMT3A-203ENST00000380746 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.23
DNMT3A-203ENST00000380746 TSPOAP1O95153 1857 aa13.64□□□□□ -0.23
DNMT3A-203ENST00000380746 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-203ENST00000380746 RILPL2Q969X0 211 aa13.64□□□□□ -0.23
DNMT3A-203ENST00000380746 MYOM2P54296 1465 aa13.64□□□□□ -0.23
DNMT3A-203ENST00000380746 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
DNMT3A-203ENST00000380746 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
DNMT3A-203ENST00000380746 LTKP29376 864 aa13.63□□□□□ -0.23
DNMT3A-203ENST00000380746 ABCC3O15438 1527 aa13.63□□□□□ -0.23
DNMT3A-203ENST00000380746 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
DNMT3A-203ENST00000380746 EXOC6BQ9Y2D4 811 aa13.63□□□□□ -0.23
DNMT3A-203ENST00000380746 ABCC11Q96J66 1382 aa13.63□□□□□ -0.23
DNMT3A-203ENST00000380746 OTUD7AQ8TE49 926 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-203ENST00000380746 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
DNMT3A-203ENST00000380746 ANXA1P04083 346 aa13.62□□□□□ -0.23
DNMT3A-203ENST00000380746 SBNO2Q9Y2G9 1366 aa13.62□□□□□ -0.23
DNMT3A-203ENST00000380746 OS9Q13438 667 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms