RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 NCOA3Q9Y6Q9 1424 aa25.38■■□□□ 1.65
GCOM1-201ENST00000380568 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
GCOM1-201ENST00000380568 SSH2Q76I76 1423 aa25.37■■□□□ 1.65
GCOM1-201ENST00000380568 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
GCOM1-201ENST00000380568 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
GCOM1-201ENST00000380568 LRRC7Q96NW7 1537 aa25.35■■□□□ 1.65
GCOM1-201ENST00000380568 CDK12Q9NYV4 1490 aaPredicted RBP25.35■■□□□ 1.65
GCOM1-201ENST00000380568 ERICH6BQ5W0A0 696 aa25.35■■□□□ 1.65
GCOM1-201ENST00000380568 PNNQ9H307 717 aaKnown RBP25.34■■□□□ 1.65
GCOM1-201ENST00000380568 OVOS2A0A0J9YW53 1432 aa25.33■■□□□ 1.65
GCOM1-201ENST00000380568 OVOS2Q6IE36 1432 aa25.33■■□□□ 1.65
GCOM1-201ENST00000380568 RUNDC1Q96C34 613 aa25.32■■□□□ 1.64
GCOM1-201ENST00000380568 NME9Q86XW9 330 aa25.31■■□□□ 1.64
GCOM1-201ENST00000380568 NGDNQ8NEJ9 315 aaKnown RBP25.31■■□□□ 1.64
GCOM1-201ENST00000380568 USP31Q70CQ4 1352 aa25.3■■□□□ 1.64
GCOM1-201ENST00000380568 USP54Q70EL1 1684 aa25.3■■□□□ 1.64
GCOM1-201ENST00000380568 ZNF521Q96K83 1311 aa25.29■■□□□ 1.64
GCOM1-201ENST00000380568 DCCP43146 1447 aa25.29■■□□□ 1.64
GCOM1-201ENST00000380568 RGPD8O14715 1765 aaPredicted RBP25.29■■□□□ 1.64
GCOM1-201ENST00000380568 KDM4FA0A1W2PPD8 638 aa25.28■■□□□ 1.64
GCOM1-201ENST00000380568 DIAPH1O60610 1272 aaKnown RBP25.28■■□□□ 1.64
GCOM1-201ENST00000380568 SUPT16HQ9Y5B9 1047 aaKnown RBP25.28■■□□□ 1.64
GCOM1-201ENST00000380568 IQSEC2Q5JU85 1478 aa25.28■■□□□ 1.64
GCOM1-201ENST00000380568 LMTK3Q96Q04 1460 aa25.28■■□□□ 1.64
GCOM1-201ENST00000380568 POLKQ9UBT6 870 aa25.27■■□□□ 1.64
GCOM1-201ENST00000380568 MAP2P11137 1827 aaKnown RBP25.26■■□□□ 1.63
GCOM1-201ENST00000380568 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
GCOM1-201ENST00000380568 APAF1O14727 1248 aa25.24■■□□□ 1.63
GCOM1-201ENST00000380568 GOLGA2Q08379 1002 aa25.24■■□□□ 1.63
GCOM1-201ENST00000380568 U2AF1L5P0DN76 240 aaPredicted RBP25.23■■□□□ 1.63
GCOM1-201ENST00000380568 U2AF1Q01081 240 aaKnown RBP eCLIP25.23■■□□□ 1.63
GCOM1-201ENST00000380568 CCDC27Q2M243 656 aa25.23■■□□□ 1.63
GCOM1-201ENST00000380568 PROSER2Q86WR7 435 aaPredicted RBP25.23■■□□□ 1.63
GCOM1-201ENST00000380568 PHF8Q9UPP1 1060 aa25.23■■□□□ 1.63
GCOM1-201ENST00000380568 RNF123Q5XPI4 1314 aa25.23■■□□□ 1.63
GCOM1-201ENST00000380568 FKBP8Q14318 412 aa25.22■■□□□ 1.63
GCOM1-201ENST00000380568 C14orf37Q86TY3 774 aa25.22■■□□□ 1.63
GCOM1-201ENST00000380568 KIF1AQ12756 1690 aa25.22■■□□□ 1.63
GCOM1-201ENST00000380568 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
GCOM1-201ENST00000380568 PMFBP1Q8TBY8 1022 aa25.22■■□□□ 1.63
GCOM1-201ENST00000380568 KIF24Q5T7B8 1368 aa25.21■■□□□ 1.63
GCOM1-201ENST00000380568 C19orf44Q9H6X5 657 aa25.21■■□□□ 1.63
GCOM1-201ENST00000380568 SALL2Q9Y467 1007 aaPredicted RBP25.2■■□□□ 1.62
GCOM1-201ENST00000380568 FCHSD2O94868 740 aa25.19■■□□□ 1.62
GCOM1-201ENST00000380568 PIK3C2AO00443 1686 aa25.19■■□□□ 1.62
GCOM1-201ENST00000380568 E9PSI1 815 aa25.18■■□□□ 1.62
GCOM1-201ENST00000380568 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
GCOM1-201ENST00000380568 NEFMP07197 916 aa25.17■■□□□ 1.62
GCOM1-201ENST00000380568 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
GCOM1-201ENST00000380568 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
GCOM1-201ENST00000380568 TCP11L2Q8N4U5 519 aa25.16■■□□□ 1.62
GCOM1-201ENST00000380568 WDR63Q8IWG1 891 aa25.15■■□□□ 1.62
GCOM1-201ENST00000380568 SLFN5Q08AF3 891 aa25.14■■□□□ 1.62
GCOM1-201ENST00000380568 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
GCOM1-201ENST00000380568 RCAN3Q9UKA8 241 aa25.14■■□□□ 1.62
GCOM1-201ENST00000380568 EMILIN1Q9Y6C2 1016 aa25.14■■□□□ 1.62
GCOM1-201ENST00000380568 STRCQ7RTU9 1775 aa25.13■■□□□ 1.61
GCOM1-201ENST00000380568 TRMT2AQ8IZ69 625 aaKnown RBP25.13■■□□□ 1.61
GCOM1-201ENST00000380568 PLEKHF1Q96S99 279 aa25.13■■□□□ 1.61
GCOM1-201ENST00000380568 WWC1Q8IX03 1113 aa25.12■■□□□ 1.61
GCOM1-201ENST00000380568 TMEM94Q12767 1356 aa25.12■■□□□ 1.61
GCOM1-201ENST00000380568 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
GCOM1-201ENST00000380568 IL13P35225 146 aa25.12■■□□□ 1.61
GCOM1-201ENST00000380568 DUSP27Q5VZP5 1158 aa25.12■■□□□ 1.61
GCOM1-201ENST00000380568 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
GCOM1-201ENST00000380568 CDCA7LQ96GN5 454 aa25.12■■□□□ 1.61
GCOM1-201ENST00000380568 C1orf167Q5SNV9 1468 aa25.11■■□□□ 1.61
GCOM1-201ENST00000380568 SBNO1A3KN83 1393 aa25.11■■□□□ 1.61
GCOM1-201ENST00000380568 STRCP1A6NGW2 1772 aa25.11■■□□□ 1.61
GCOM1-201ENST00000380568 HSPA2P54652 639 aa25.11■■□□□ 1.61
GCOM1-201ENST00000380568 ESCO1Q5FWF5 840 aa25.11■■□□□ 1.61
GCOM1-201ENST00000380568 FLT4P35916 1363 aa25.1■■□□□ 1.61
GCOM1-201ENST00000380568 ATF3P18847 181 aa25.09■■□□□ 1.61
GCOM1-201ENST00000380568 CADPS2Q86UW7 1296 aa25.09■■□□□ 1.61
GCOM1-201ENST00000380568 MST1RQ04912 1400 aa25.08■■□□□ 1.61
GCOM1-201ENST00000380568 SENP3-EIF4A1A0A087X0R7 540 aa25.08■■□□□ 1.61
GCOM1-201ENST00000380568 RTL1A6NKG5 1358 aa25.08■■□□□ 1.61
GCOM1-201ENST00000380568 NLRP6P59044 892 aa25.07■■□□□ 1.6
GCOM1-201ENST00000380568 PSME1Q06323 249 aa25.07■■□□□ 1.6
GCOM1-201ENST00000380568 RRS1Q15050 365 aaKnown RBP25.07■■□□□ 1.6
GCOM1-201ENST00000380568 MSH6P52701 1360 aa25.07■■□□□ 1.6
GCOM1-201ENST00000380568 MARF1Q9Y4F3 1742 aaKnown RBP25.07■■□□□ 1.6
GCOM1-201ENST00000380568 ABTB2Q8N961 1025 aa25.07■■□□□ 1.6
GCOM1-201ENST00000380568 RSPH6AQ9H0K4 717 aa25.07■■□□□ 1.6
GCOM1-201ENST00000380568 DMRT2Q9Y5R5 561 aa25.06■■□□□ 1.6
GCOM1-201ENST00000380568 IL16Q14005 1332 aa25.05■■□□□ 1.6
GCOM1-201ENST00000380568 TMPOP42166 694 aaKnown RBP25.04■■□□□ 1.6
GCOM1-201ENST00000380568 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
GCOM1-201ENST00000380568 PEAK1Q9H792 1746 aa25.03■■□□□ 1.6
GCOM1-201ENST00000380568 RRP1P56182 461 aaKnown RBP25.03■■□□□ 1.6
GCOM1-201ENST00000380568 RBM33Q96EV2 1170 aaKnown RBP25.03■■□□□ 1.6
GCOM1-201ENST00000380568 MYH16Q9H6N6 1097 aa25.03■■□□□ 1.6
GCOM1-201ENST00000380568 RGPD1P0DJD0 1748 aa25.02■■□□□ 1.6
GCOM1-201ENST00000380568 MAP3K19Q56UN5 1328 aa25.02■■□□□ 1.6
GCOM1-201ENST00000380568 ARHGEF10O15013 1369 aa25.02■■□□□ 1.6
GCOM1-201ENST00000380568 PAK3O75914 559 aaPredicted RBP25.02■■□□□ 1.6
GCOM1-201ENST00000380568 FBLN1P23142 703 aa25.02■■□□□ 1.6
GCOM1-201ENST00000380568 PHRF1Q9P1Y6 1649 aaKnown RBP25.01■■□□□ 1.59
GCOM1-201ENST00000380568 TRPM3Q9HCF6 1732 aaPredicted RBP25.01■■□□□ 1.59
GCOM1-201ENST00000380568 PRKAR2BP31323 418 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms