RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SART3Q15020 963 aaKnown RBP19.25■□□□□ 0.67
COL2A1-202ENST00000380518 CCDC43Q96MW1 224 aaKnown RBP19.25■□□□□ 0.67
COL2A1-202ENST00000380518 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
COL2A1-202ENST00000380518 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
COL2A1-202ENST00000380518 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
COL2A1-202ENST00000380518 BCAR3O75815 825 aa19.24■□□□□ 0.67
COL2A1-202ENST00000380518 CCDC27Q2M243 656 aa19.24■□□□□ 0.67
COL2A1-202ENST00000380518 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
COL2A1-202ENST00000380518 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
COL2A1-202ENST00000380518 KINO60870 393 aaKnown RBP19.23■□□□□ 0.67
COL2A1-202ENST00000380518 ACBD3Q9H3P7 528 aa19.23■□□□□ 0.67
COL2A1-202ENST00000380518 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
COL2A1-202ENST00000380518 SLC4A2P04920 1241 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
COL2A1-202ENST00000380518 TRIM5Q9C035 493 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
COL2A1-202ENST00000380518 HDGFL1Q5TGJ6 251 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.67
COL2A1-202ENST00000380518 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 TXNDC2Q86VQ3 553 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 ZNF692Q9BU19 519 aaPredicted RBP19.2■□□□□ 0.66
COL2A1-202ENST00000380518 NAP1L1P55209 391 aaKnown RBP19.2■□□□□ 0.66
COL2A1-202ENST00000380518 RUFY1Q96T51 708 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 FYB1O15117 783 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
COL2A1-202ENST00000380518 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
COL2A1-202ENST00000380518 CDR1P51861 262 aa19.19■□□□□ 0.66
COL2A1-202ENST00000380518 TSPY26PQ9H489 355 aa19.19■□□□□ 0.66
COL2A1-202ENST00000380518 HSP90B2PQ58FF3 399 aa19.19■□□□□ 0.66
COL2A1-202ENST00000380518 OFD1O75665 1012 aa19.18■□□□□ 0.66
COL2A1-202ENST00000380518 PDILTQ8N807 584 aa19.18■□□□□ 0.66
COL2A1-202ENST00000380518 FIBPO43427 364 aa19.18■□□□□ 0.66
COL2A1-202ENST00000380518 MTERF4Q7Z6M4 381 aaKnown RBP19.18■□□□□ 0.66
COL2A1-202ENST00000380518 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
COL2A1-202ENST00000380518 AK7Q96M32 723 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 PLEKHH2Q8IVE3 1493 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
COL2A1-202ENST00000380518 LRRCC1Q9C099 1032 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
COL2A1-202ENST00000380518 CDK19Q9BWU1 502 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 EFCAB5A4FU69 1503 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 MAP7D2Q96T17 732 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 EHBP1L1Q8N3D4 1523 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 CT47A1Q5JQC4 288 aaPredicted RBP19.15■□□□□ 0.66
COL2A1-202ENST00000380518 KIF6Q6ZMV9 814 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 ATP2B1P20020 1258 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 STK38Q15208 465 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
COL2A1-202ENST00000380518 ERBINQ96RT1 1412 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 CCDC173Q0VFZ6 552 aa19.14■□□□□ 0.66
COL2A1-202ENST00000380518 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.65
COL2A1-202ENST00000380518 ANKRD1Q15327 319 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 EPS15P42566 896 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 CCDC158Q5M9N0 1113 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 TROQ12816 1431 aaPredicted RBP19.14■□□□□ 0.65
COL2A1-202ENST00000380518 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
COL2A1-202ENST00000380518 MEX3CQ5U5Q3 659 aaKnown RBP19.13■□□□□ 0.65
COL2A1-202ENST00000380518 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 WDR33Q9C0J8 1336 aaKnown RBP19.13■□□□□ 0.65
COL2A1-202ENST00000380518 SMC2O95347 1197 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 FILIP1LQ4L180 1135 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 FMNL2Q96PY5 1086 aa19.12■□□□□ 0.65
COL2A1-202ENST00000380518 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
COL2A1-202ENST00000380518 CHD1LQ86WJ1 897 aa19.12■□□□□ 0.65
COL2A1-202ENST00000380518 HMGN5P82970 282 aaKnown RBP19.12■□□□□ 0.65
COL2A1-202ENST00000380518 TXLNAP40222 546 aa19.12■□□□□ 0.65
COL2A1-202ENST00000380518 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
COL2A1-202ENST00000380518 CCP110O43303 1012 aa19.11■□□□□ 0.65
COL2A1-202ENST00000380518 MTMR7Q9Y216 660 aa19.11■□□□□ 0.65
COL2A1-202ENST00000380518 ZNF530Q6P9A1 599 aaPredicted RBP19.11■□□□□ 0.65
COL2A1-202ENST00000380518 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL2A1-202ENST00000380518 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
COL2A1-202ENST00000380518 PIP4K2AP48426 406 aaPredicted RBP19.1■□□□□ 0.65
COL2A1-202ENST00000380518 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
COL2A1-202ENST00000380518 RPGRIP1LQ68CZ1 1315 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 FAM177BA6PVY3 158 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 KDM4AO75164 1064 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 TTC39AQ5SRH9 613 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 PATL2C9JE40 543 aaKnown RBP19.09■□□□□ 0.65
COL2A1-202ENST00000380518 CCDC192P0DO97 292 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ODF2Q5BJF6 829 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ERCC4Q92889 916 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-202ENST00000380518 SMARCE1Q969G3 411 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ATAD2Q6PL18 1390 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 FCHSD2O94868 740 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms