RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 SPATA31A6Q5VVP1 1343 aa8.51□□□□□ -1.05
FOCAD-202ENST00000380249 TNS3Q68CZ2 1445 aa8.51□□□□□ -1.05
FOCAD-202ENST00000380249 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
FOCAD-202ENST00000380249 PIP4K2BP78356 416 aa8.5□□□□□ -1.05
FOCAD-202ENST00000380249 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
FOCAD-202ENST00000380249 NLRP6P59044 892 aa8.5□□□□□ -1.05
FOCAD-202ENST00000380249 COG3Q96JB2 828 aa8.5□□□□□ -1.05
FOCAD-202ENST00000380249 KIF24Q5T7B8 1368 aa8.5□□□□□ -1.05
FOCAD-202ENST00000380249 ABTB2Q8N961 1025 aa8.49□□□□□ -1.05
FOCAD-202ENST00000380249 RALBP1Q15311 655 aa8.48□□□□□ -1.05
FOCAD-202ENST00000380249 XIRP1Q702N8 1843 aaKnown RBP8.48□□□□□ -1.05
FOCAD-202ENST00000380249 USP19O94966 1318 aa8.48□□□□□ -1.05
FOCAD-202ENST00000380249 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
FOCAD-202ENST00000380249 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
FOCAD-202ENST00000380249 PXDNQ92626 1479 aa8.48□□□□□ -1.05
FOCAD-202ENST00000380249 FYB1O15117 783 aa8.48□□□□□ -1.05
FOCAD-202ENST00000380249 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
FOCAD-202ENST00000380249 CD163L1Q9NR16 1453 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 AATKQ6ZMQ8 1374 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 TOPAZ1Q8N9V7 1692 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 DDX10Q13206 875 aaKnown RBP8.47□□□□□ -1.05
FOCAD-202ENST00000380249 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
FOCAD-202ENST00000380249 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.05
FOCAD-202ENST00000380249 MORC1Q86VD1 984 aa8.46□□□□□ -1.06
FOCAD-202ENST00000380249 CPDO75976 1380 aa8.46□□□□□ -1.06
FOCAD-202ENST00000380249 HSPA1LP34931 641 aa8.45□□□□□ -1.06
FOCAD-202ENST00000380249 GCP02774 474 aa8.45□□□□□ -1.06
FOCAD-202ENST00000380249 OVOS2A0A0J9YW53 1432 aa8.45□□□□□ -1.06
FOCAD-202ENST00000380249 OVOS2Q6IE36 1432 aa8.45□□□□□ -1.06
FOCAD-202ENST00000380249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.45□□□□□ -1.068e-7■■■■□ 25.8
FOCAD-202ENST00000380249 ROBO1Q9Y6N7 1651 aa8.44□□□□□ -1.06
FOCAD-202ENST00000380249 NHSL1Q5SYE7 1610 aa8.44□□□□□ -1.06
FOCAD-202ENST00000380249 NME9Q86XW9 330 aa8.44□□□□□ -1.06
FOCAD-202ENST00000380249 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
FOCAD-202ENST00000380249 RTL1A6NKG5 1358 aa8.44□□□□□ -1.06
FOCAD-202ENST00000380249 CFAP53Q96M91 514 aa8.44□□□□□ -1.06
FOCAD-202ENST00000380249 MED1Q15648 1581 aaPredicted RBP8.43□□□□□ -1.06
FOCAD-202ENST00000380249 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
FOCAD-202ENST00000380249 GGNBP2Q9H3C7 697 aa8.43□□□□□ -1.06
FOCAD-202ENST00000380249 ANP32CO43423 234 aa8.43□□□□□ -1.06
FOCAD-202ENST00000380249 ARHGEF25Q86VW2 580 aa8.43□□□□□ -1.06
FOCAD-202ENST00000380249 YTHDC1Q96MU7 727 aaKnown RBP8.42□□□□□ -1.06
FOCAD-202ENST00000380249 ABCC6O95255 1503 aa8.42□□□□□ -1.06
FOCAD-202ENST00000380249 PARD3Q8TEW0 1356 aa8.42□□□□□ -1.06
FOCAD-202ENST00000380249 FLT4P35916 1363 aa8.42□□□□□ -1.06
FOCAD-202ENST00000380249 PRKRIP1Q9H875 184 aaPredicted RBP8.41□□□□□ -1.06
FOCAD-202ENST00000380249 INSRP06213 1382 aa8.41□□□□□ -1.06
FOCAD-202ENST00000380249 COL16A1Q07092 1604 aaPredicted RBP8.41□□□□□ -1.06
FOCAD-202ENST00000380249 PLEKHG2Q9H7P9 1386 aa8.41□□□□□ -1.06
FOCAD-202ENST00000380249 MON2Q7Z3U7 1717 aa8.4□□□□□ -1.06
FOCAD-202ENST00000380249 AMPHP49418 695 aa8.4□□□□□ -1.06
FOCAD-202ENST00000380249 NUDCQ9Y266 331 aa8.4□□□□□ -1.06
FOCAD-202ENST00000380249 BLMP54132 1417 aaPredicted RBP8.4□□□□□ -1.06
FOCAD-202ENST00000380249 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
FOCAD-202ENST00000380249 SLIT3O75094 1523 aa8.4□□□□□ -1.07
FOCAD-202ENST00000380249 MYBBP1AQ9BQG0 1328 aaKnown RBP8.4□□□□□ -1.07
FOCAD-202ENST00000380249 IP6K1Q92551 441 aa8.4□□□□□ -1.07
FOCAD-202ENST00000380249 MAP3K19Q56UN5 1328 aa8.39□□□□□ -1.07
FOCAD-202ENST00000380249 MYOM1P52179 1685 aa8.39□□□□□ -1.07
FOCAD-202ENST00000380249 AKAP12Q02952 1782 aa8.39□□□□□ -1.07
FOCAD-202ENST00000380249 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
FOCAD-202ENST00000380249 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
FOCAD-202ENST00000380249 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
FOCAD-202ENST00000380249 POLKQ9UBT6 870 aa8.38□□□□□ -1.07
FOCAD-202ENST00000380249 COL22A1Q8NFW1 1626 aaPredicted RBP8.38□□□□□ -1.07
FOCAD-202ENST00000380249 TRPM3Q9HCF6 1732 aaPredicted RBP8.38□□□□□ -1.07
FOCAD-202ENST00000380249 KIAA0232Q92628 1395 aa8.38□□□□□ -1.07
FOCAD-202ENST00000380249 CCER2I3L3R5 266 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
FOCAD-202ENST00000380249 PHLPP1O60346 1717 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 SMG6Q86US8 1419 aaKnown RBP8.37□□□□□ -1.07
FOCAD-202ENST00000380249 ZNF772Q68DY9 489 aaPredicted RBP8.37□□□□□ -1.07
FOCAD-202ENST00000380249 NRKQ7Z2Y5 1582 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 ZC3H6P61129 1189 aaKnown RBP8.37□□□□□ -1.07
FOCAD-202ENST00000380249 CC2D1BQ5T0F9 858 aaKnown RBP8.37□□□□□ -1.07
FOCAD-202ENST00000380249 USP54Q70EL1 1684 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 ALS2Q96Q42 1657 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 PPP2R1AP30153 589 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 NUTM2GQ5VZR2 741 aa8.37□□□□□ -1.07
FOCAD-202ENST00000380249 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
FOCAD-202ENST00000380249 PNNQ9H307 717 aaKnown RBP8.36□□□□□ -1.07
FOCAD-202ENST00000380249 CDK12Q9NYV4 1490 aaPredicted RBP8.36□□□□□ -1.07
FOCAD-202ENST00000380249 ERBB3P21860 1342 aa8.36□□□□□ -1.07
FOCAD-202ENST00000380249 MTHFSP49914 203 aa8.36□□□□□ -1.07
FOCAD-202ENST00000380249 RGPD8O14715 1765 aaPredicted RBP8.36□□□□□ -1.07
FOCAD-202ENST00000380249 TRPC5Q9UL62 973 aaPredicted RBP8.36□□□□□ -1.07
FOCAD-202ENST00000380249 SHPRHQ149N8 1683 aa8.36□□□□□ -1.07
FOCAD-202ENST00000380249 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
FOCAD-202ENST00000380249 WDR17Q8IZU2 1322 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
FOCAD-202ENST00000380249 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
FOCAD-202ENST00000380249 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
FOCAD-202ENST00000380249 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
FOCAD-202ENST00000380249 ZRANB1Q9UGI0 708 aa8.35□□□□□ -1.07
FOCAD-202ENST00000380249 DIAPH1O60610 1272 aaKnown RBP8.35□□□□□ -1.07
FOCAD-202ENST00000380249 NEFMP07197 916 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms