RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 ABCA3Q99758 1704 aa37.34■■■■□ 3.57
ATRAID-201ENST00000380171 ZEB1P37275 1124 aaPredicted RBP37.34■■■■□ 3.57
ATRAID-201ENST00000380171 SLC12A5Q9H2X9 1139 aa37.34■■■■□ 3.57
ATRAID-201ENST00000380171 BRD4O60885 1362 aaPredicted RBP37.32■■■■□ 3.57
ATRAID-201ENST00000380171 KTN1Q86UP2 1357 aaKnown RBP37.32■■■■□ 3.57
ATRAID-201ENST00000380171 NUTM2BA6NNL0 878 aaPredicted RBP37.32■■■■□ 3.56
ATRAID-201ENST00000380171 NUTM2EB1AL46 878 aaPredicted RBP37.32■■■■□ 3.56
ATRAID-201ENST00000380171 NUTM2AQ8IVF1 878 aaPredicted RBP37.32■■■■□ 3.56
ATRAID-201ENST00000380171 HDGFL2Q7Z4V5 671 aaPredicted RBP37.3■■■■□ 3.56
ATRAID-201ENST00000380171 POLR3GLQ9BT43 218 aa37.3■■■■□ 3.56
ATRAID-201ENST00000380171 ZNF692Q9BU19 519 aaPredicted RBP37.3■■■■□ 3.56
ATRAID-201ENST00000380171 TERF2IPQ9NYB0 399 aa37.29■■■■□ 3.56
ATRAID-201ENST00000380171 A0A1W2PP64 1363 aa37.29■■■■□ 3.56
ATRAID-201ENST00000380171 CRYBG1Q9Y4K1 1723 aa37.27■■■■□ 3.56
ATRAID-201ENST00000380171 SSH2Q76I76 1423 aa37.26■■■■□ 3.55
ATRAID-201ENST00000380171 PIK3C2AO00443 1686 aa37.25■■■■□ 3.55
ATRAID-201ENST00000380171 PLEKHG5O94827 1062 aa37.25■■■■□ 3.55
ATRAID-201ENST00000380171 MARF1Q9Y4F3 1742 aaKnown RBP37.24■■■■□ 3.55
ATRAID-201ENST00000380171 MEX3CQ5U5Q3 659 aaKnown RBP37.24■■■■□ 3.55
ATRAID-201ENST00000380171 ANKRD36BQ8N2N9 1353 aa37.24■■■■□ 3.55
ATRAID-201ENST00000380171 PHRF1Q9P1Y6 1649 aaKnown RBP37.23■■■■□ 3.55
ATRAID-201ENST00000380171 EDC4Q6P2E9 1401 aaKnown RBP37.21■■■■□ 3.55
ATRAID-201ENST00000380171 TTC21BQ7Z4L5 1316 aa37.2■■■■□ 3.55
ATRAID-201ENST00000380171 HAP1P54257 671 aaPredicted RBP37.2■■■■□ 3.55
ATRAID-201ENST00000380171 ABTB2Q8N961 1025 aa37.2■■■■□ 3.55
ATRAID-201ENST00000380171 NUTM2GQ5VZR2 741 aa37.19■■■■□ 3.54
ATRAID-201ENST00000380171 TTC21AQ8NDW8 1320 aa37.18■■■■□ 3.54
ATRAID-201ENST00000380171 C11orf95C9JLR9 678 aaPredicted RBP37.18■■■■□ 3.54
ATRAID-201ENST00000380171 CABLES1Q8TDN4 633 aa37.18■■■■□ 3.54
ATRAID-201ENST00000380171 ADAMTS2O95450 1211 aa37.17■■■■□ 3.54
ATRAID-201ENST00000380171 PHF23Q9BUL5 403 aaPredicted RBP37.15■■■■□ 3.54
ATRAID-201ENST00000380171 KIF7Q2M1P5 1343 aa37.14■■■■□ 3.54
ATRAID-201ENST00000380171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.14■■■■□ 3.54
ATRAID-201ENST00000380171 USP54Q70EL1 1684 aa37.11■■■■□ 3.53
ATRAID-201ENST00000380171 NLRP13Q86W25 1043 aa37.1■■■■□ 3.53
ATRAID-201ENST00000380171 NLRP6P59044 892 aa37.09■■■■□ 3.53
ATRAID-201ENST00000380171 C8orf37Q96NL8 207 aa37.09■■■■□ 3.53
ATRAID-201ENST00000380171 USP19O94966 1318 aa37.09■■■■□ 3.53
ATRAID-201ENST00000380171 KIF20BQ96Q89 1820 aa37.08■■■■□ 3.53
ATRAID-201ENST00000380171 SLIT3O75094 1523 aa37.07■■■■□ 3.53
ATRAID-201ENST00000380171 CCDC7Q96M83 1385 aa37.06■■■■□ 3.52
ATRAID-201ENST00000380171 NSD3Q9BZ95 1437 aa37.05■■■■□ 3.52
ATRAID-201ENST00000380171 NME9Q86XW9 330 aa37.05■■■■□ 3.52
ATRAID-201ENST00000380171 PLCH1Q4KWH8 1693 aa37.04■■■■□ 3.52
ATRAID-201ENST00000380171 NGLY1Q96IV0 654 aa37.01■■■■□ 3.52
ATRAID-201ENST00000380171 USP31Q70CQ4 1352 aa37.01■■■■□ 3.51
ATRAID-201ENST00000380171 AFF2P51816 1311 aa37■■■■□ 3.51
ATRAID-201ENST00000380171 WASHC2AQ641Q2 1341 aa37■■■■□ 3.51
ATRAID-201ENST00000380171 COL14A1Q05707 1796 aaKnown RBP36.99■■■■□ 3.51
ATRAID-201ENST00000380171 ZRANB1Q9UGI0 708 aa36.98■■■■□ 3.51
ATRAID-201ENST00000380171 OVOS2A0A0J9YW53 1432 aa36.98■■■■□ 3.51
ATRAID-201ENST00000380171 OVOS2Q6IE36 1432 aa36.98■■■■□ 3.51
ATRAID-201ENST00000380171 CARD14Q9BXL6 1004 aa36.97■■■■□ 3.51
ATRAID-201ENST00000380171 NWD2Q9ULI1 1742 aa36.96■■■■□ 3.51
ATRAID-201ENST00000380171 KIAA0232Q92628 1395 aa36.95■■■■□ 3.51
ATRAID-201ENST00000380171 PANK3Q9H999 370 aa36.95■■■■□ 3.51
ATRAID-201ENST00000380171 GCP02774 474 aa36.94■■■■□ 3.5
ATRAID-201ENST00000380171 PRDM11Q9NQV5 511 aa36.94■■■■□ 3.5
ATRAID-201ENST00000380171 ZC3H6P61129 1189 aaKnown RBP36.93■■■■□ 3.5
ATRAID-201ENST00000380171 NFAT5O94916 1531 aa36.93■■■■□ 3.5
ATRAID-201ENST00000380171 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.93■■■■□ 3.5
ATRAID-201ENST00000380171 SLIT2O94813 1529 aa36.91■■■■□ 3.5
ATRAID-201ENST00000380171 RGS17Q9UGC6 210 aaPredicted RBP36.91■■■■□ 3.5
ATRAID-201ENST00000380171 CPDO75976 1380 aa36.91■■■■□ 3.5
ATRAID-201ENST00000380171 SOX12O15370 315 aa36.9■■■■□ 3.5
ATRAID-201ENST00000380171 ZNF772Q68DY9 489 aaPredicted RBP36.9■■■■□ 3.5
ATRAID-201ENST00000380171 KCNH5Q8NCM2 988 aa36.9■■■■□ 3.5
ATRAID-201ENST00000380171 COG3Q96JB2 828 aa36.89■■■■□ 3.5
ATRAID-201ENST00000380171 NRAPQ86VF7 1730 aa36.88■■■■□ 3.49
ATRAID-201ENST00000380171 ANKRD26Q9UPS8 1709 aa36.88■■■■□ 3.49
ATRAID-201ENST00000380171 FNBP4Q8N3X1 1017 aaPredicted RBP36.88■■■■□ 3.49
ATRAID-201ENST00000380171 CGNL1Q0VF96 1302 aa36.87■■■■□ 3.49
ATRAID-201ENST00000380171 FAM83GA6ND36 823 aa36.87■■■■□ 3.49
ATRAID-201ENST00000380171 GGNBP2Q9H3C7 697 aa36.87■■■■□ 3.49
ATRAID-201ENST00000380171 USP21Q9UK80 565 aa36.87■■■■□ 3.49
ATRAID-201ENST00000380171 FYB1O15117 783 aa36.86■■■■□ 3.49
ATRAID-201ENST00000380171 LTN1O94822 1766 aa36.86■■■■□ 3.49
ATRAID-201ENST00000380171 ZBTB7CA1YPR0 619 aa36.85■■■■□ 3.49
ATRAID-201ENST00000380171 CHRNA2Q15822 529 aa36.85■■■■□ 3.49
ATRAID-201ENST00000380171 LMO7Q8WWI1 1683 aa36.85■■■■□ 3.49
ATRAID-201ENST00000380171 BCL9LQ86UU0 1499 aa36.84■■■■□ 3.49
ATRAID-201ENST00000380171 BTG4Q9NY30 223 aa36.79■■■■□ 3.48
ATRAID-201ENST00000380171 KNSTRNQ9Y448 316 aa36.79■■■■□ 3.48
ATRAID-201ENST00000380171 POTEAQ6S8J7 498 aa36.78■■■■□ 3.48
ATRAID-201ENST00000380171 COL18A1P39060 1754 aa36.78■■■■□ 3.48
ATRAID-201ENST00000380171 ATRNO75882 1429 aa36.77■■■■□ 3.48
ATRAID-201ENST00000380171 UNC5CLQ8IV45 518 aa36.77■■■■□ 3.48
ATRAID-201ENST00000380171 ABCC6O95255 1503 aa36.76■■■■□ 3.48
ATRAID-201ENST00000380171 NSD2O96028 1365 aa36.76■■■■□ 3.47
ATRAID-201ENST00000380171 AATKQ6ZMQ8 1374 aa36.76■■■■□ 3.47
ATRAID-201ENST00000380171 CAMTA1Q9Y6Y1 1673 aa36.75■■■■□ 3.47
ATRAID-201ENST00000380171 ARHGEF25Q86VW2 580 aa36.75■■■■□ 3.47
ATRAID-201ENST00000380171 TRPC5Q9UL62 973 aaPredicted RBP36.75■■■■□ 3.47
ATRAID-201ENST00000380171 QTRT2Q9H974 415 aaKnown RBP36.73■■■■□ 3.47
ATRAID-201ENST00000380171 RGPD5Q99666 1765 aa36.73■■■■□ 3.47
ATRAID-201ENST00000380171 COL5A2P05997 1499 aaPredicted RBP36.69■■■■□ 3.46
ATRAID-201ENST00000380171 STRN4Q9NRL3 753 aa36.67■■■■□ 3.46
ATRAID-201ENST00000380171 CCDC9Q9Y3X0 531 aaKnown RBP36.66■■■■□ 3.46
ATRAID-201ENST00000380171 GLI3P10071 1580 aa36.66■■■■□ 3.46
ATRAID-201ENST00000380171 VPS72Q15906 364 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms