RNA–Protein interactions for RNA: ENST00000380135.7

LETMD1-202, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-202ENST00000380135 FNBP4Q8N3X1 1017 aaPredicted RBP22.65■■□□□ 1.22
LETMD1-202ENST00000380135 TESK2Q96S53 571 aa22.65■■□□□ 1.22
LETMD1-202ENST00000380135 USP47Q96K76 1375 aa22.64■■□□□ 1.21
LETMD1-202ENST00000380135 SOCS7O14512 581 aa22.63■■□□□ 1.21
LETMD1-202ENST00000380135 USP21Q9UK80 565 aa22.63■■□□□ 1.21
LETMD1-202ENST00000380135 BRD4O60885 1362 aaPredicted RBP22.63■■□□□ 1.21
LETMD1-202ENST00000380135 PUS7Q96PZ0 661 aaKnown RBP22.63■■□□□ 1.21
LETMD1-202ENST00000380135 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
LETMD1-202ENST00000380135 QTRT2Q9H974 415 aaKnown RBP22.62■■□□□ 1.21
LETMD1-202ENST00000380135 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
LETMD1-202ENST00000380135 RXRBP28702 533 aa22.6■■□□□ 1.21
LETMD1-202ENST00000380135 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
LETMD1-202ENST00000380135 USP6P35125 1406 aa22.59■■□□□ 1.21
LETMD1-202ENST00000380135 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
LETMD1-202ENST00000380135 NUTM2GQ5VZR2 741 aa22.58■■□□□ 1.2
LETMD1-202ENST00000380135 TRPC5Q9UL62 973 aaPredicted RBP22.57■■□□□ 1.2
LETMD1-202ENST00000380135 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
LETMD1-202ENST00000380135 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
LETMD1-202ENST00000380135 BCL9LQ86UU0 1499 aa22.56■■□□□ 1.2
LETMD1-202ENST00000380135 CPSF1Q10570 1443 aaKnown RBP22.56■■□□□ 1.2
LETMD1-202ENST00000380135 FAM83GA6ND36 823 aa22.55■■□□□ 1.2
LETMD1-202ENST00000380135 TMF1P82094 1093 aa22.55■■□□□ 1.2
LETMD1-202ENST00000380135 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
LETMD1-202ENST00000380135 SSH2Q76I76 1423 aa22.55■■□□□ 1.2
LETMD1-202ENST00000380135 SLIT2O94813 1529 aa22.54■■□□□ 1.2
LETMD1-202ENST00000380135 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
LETMD1-202ENST00000380135 SLC12A5Q9H2X9 1139 aa22.54■■□□□ 1.2
LETMD1-202ENST00000380135 CRYBG1Q9Y4K1 1723 aa22.53■■□□□ 1.2
LETMD1-202ENST00000380135 KTN1Q86UP2 1357 aaKnown RBP22.53■■□□□ 1.2
LETMD1-202ENST00000380135 ATRNO75882 1429 aa22.53■■□□□ 1.2
LETMD1-202ENST00000380135 AKAP12Q02952 1782 aa22.52■■□□□ 1.2
LETMD1-202ENST00000380135 TTC21BQ7Z4L5 1316 aa22.52■■□□□ 1.2
LETMD1-202ENST00000380135 NLRP6P59044 892 aa22.51■■□□□ 1.19
LETMD1-202ENST00000380135 HDGFL2Q7Z4V5 671 aaPredicted RBP22.51■■□□□ 1.19
LETMD1-202ENST00000380135 USP19O94966 1318 aa22.51■■□□□ 1.19
LETMD1-202ENST00000380135 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
LETMD1-202ENST00000380135 TTC21AQ8NDW8 1320 aa22.5■■□□□ 1.19
LETMD1-202ENST00000380135 CDK12Q9NYV4 1490 aaPredicted RBP22.5■■□□□ 1.19
LETMD1-202ENST00000380135 CDCA8Q53HL2 280 aa22.5■■□□□ 1.19
LETMD1-202ENST00000380135 PRDM11Q9NQV5 511 aa22.5■■□□□ 1.19
LETMD1-202ENST00000380135 CD163L1Q9NR16 1453 aa22.49■■□□□ 1.19
LETMD1-202ENST00000380135 NINLQ9Y2I6 1382 aa22.49■■□□□ 1.19
LETMD1-202ENST00000380135 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
LETMD1-202ENST00000380135 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
LETMD1-202ENST00000380135 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.48■■□□□ 1.19
LETMD1-202ENST00000380135 KIAA0232Q92628 1395 aa22.47■■□□□ 1.19
LETMD1-202ENST00000380135 GCP02774 474 aa22.47■■□□□ 1.19
LETMD1-202ENST00000380135 EIF4G2P78344 907 aaKnown RBP eCLIP22.47■■□□□ 1.19
LETMD1-202ENST00000380135 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
LETMD1-202ENST00000380135 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
LETMD1-202ENST00000380135 COL14A1Q05707 1796 aaKnown RBP22.47■■□□□ 1.19
LETMD1-202ENST00000380135 NWD2Q9ULI1 1742 aa22.46■■□□□ 1.19
LETMD1-202ENST00000380135 PLCH1Q4KWH8 1693 aa22.46■■□□□ 1.19
LETMD1-202ENST00000380135 MON2Q7Z3U7 1717 aa22.45■■□□□ 1.18
LETMD1-202ENST00000380135 VPS72Q15906 364 aa22.45■■□□□ 1.18
LETMD1-202ENST00000380135 A0A1W2PP64 1363 aa22.44■■□□□ 1.18
LETMD1-202ENST00000380135 PIK3C2AO00443 1686 aa22.44■■□□□ 1.18
LETMD1-202ENST00000380135 CHRNA2Q15822 529 aa22.44■■□□□ 1.18
LETMD1-202ENST00000380135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.44■■□□□ 1.18
LETMD1-202ENST00000380135 NRKQ7Z2Y5 1582 aa22.44■■□□□ 1.18
LETMD1-202ENST00000380135 HSPA5P11021 654 aaKnown RBP22.43■■□□□ 1.18
LETMD1-202ENST00000380135 CPDO75976 1380 aa22.43■■□□□ 1.18
LETMD1-202ENST00000380135 RGS12O14924 1447 aa22.42■■□□□ 1.18
LETMD1-202ENST00000380135 EDC4Q6P2E9 1401 aaKnown RBP22.42■■□□□ 1.18
LETMD1-202ENST00000380135 CCDC9Q9Y3X0 531 aaKnown RBP22.42■■□□□ 1.18
LETMD1-202ENST00000380135 SLIT3O75094 1523 aa22.41■■□□□ 1.18
LETMD1-202ENST00000380135 KCNH5Q8NCM2 988 aa22.4■■□□□ 1.18
LETMD1-202ENST00000380135 USP31Q70CQ4 1352 aa22.39■■□□□ 1.18
LETMD1-202ENST00000380135 ANKRD36BQ8N2N9 1353 aa22.39■■□□□ 1.18
LETMD1-202ENST00000380135 NME9Q86XW9 330 aa22.39■■□□□ 1.18
LETMD1-202ENST00000380135 NRAPQ86VF7 1730 aa22.38■■□□□ 1.17
LETMD1-202ENST00000380135 ZRANB1Q9UGI0 708 aa22.38■■□□□ 1.17
LETMD1-202ENST00000380135 GLI3P10071 1580 aa22.37■■□□□ 1.17
LETMD1-202ENST00000380135 ZBTB7CA1YPR0 619 aa22.35■■□□□ 1.17
LETMD1-202ENST00000380135 EVA1CP58658 441 aa22.35■■□□□ 1.17
LETMD1-202ENST00000380135 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
LETMD1-202ENST00000380135 SOX12O15370 315 aa22.34■■□□□ 1.17
LETMD1-202ENST00000380135 SPATA31A5Q5VU36 1347 aa22.34■■□□□ 1.17
LETMD1-202ENST00000380135 SPATA31A7Q8IWB4 1347 aa22.34■■□□□ 1.17
LETMD1-202ENST00000380135 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
LETMD1-202ENST00000380135 CAMTA1Q9Y6Y1 1673 aa22.34■■□□□ 1.17
LETMD1-202ENST00000380135 ONECUT3O60422 494 aaPredicted RBP22.33■■□□□ 1.17
LETMD1-202ENST00000380135 ARHGEF25Q86VW2 580 aa22.33■■□□□ 1.17
LETMD1-202ENST00000380135 LMO7Q8WWI1 1683 aa22.32■■□□□ 1.16
LETMD1-202ENST00000380135 POLR3GLQ9BT43 218 aa22.32■■□□□ 1.16
LETMD1-202ENST00000380135 USP54Q70EL1 1684 aa22.31■■□□□ 1.16
LETMD1-202ENST00000380135 SEPT12Q8IYM1 358 aa22.3■■□□□ 1.16
LETMD1-202ENST00000380135 NFAT5O94916 1531 aa22.29■■□□□ 1.16
LETMD1-202ENST00000380135 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
LETMD1-202ENST00000380135 OVOS2A0A0J9YW53 1432 aa22.29■■□□□ 1.16
LETMD1-202ENST00000380135 OVOS2Q6IE36 1432 aa22.29■■□□□ 1.16
LETMD1-202ENST00000380135 FAM98CQ17RN3 349 aaKnown RBP22.29■■□□□ 1.16
LETMD1-202ENST00000380135 COG3Q96JB2 828 aa22.29■■□□□ 1.16
LETMD1-202ENST00000380135 LARP1Q6PKG0 1096 aaKnown RBP22.28■■□□□ 1.16
LETMD1-202ENST00000380135 UPF1Q92900 1129 aaKnown RBP eCLIP22.28■■□□□ 1.162e-8■■■□□ 17.9
LETMD1-202ENST00000380135 MYOM1P52179 1685 aa22.28■■□□□ 1.16
LETMD1-202ENST00000380135 CARD14Q9BXL6 1004 aa22.27■■□□□ 1.16
LETMD1-202ENST00000380135 AXIN2Q9Y2T1 843 aa22.27■■□□□ 1.16
LETMD1-202ENST00000380135 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
LETMD1-202ENST00000380135 A0A0G2JS52 829 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms