RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 V9GYY5 206 aaPredicted RBP10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 KRBA2Q6ZNG9 492 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 CLEC17AQ6ZS10 378 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 BRMS1Q9HCU9 246 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 PYCARDQ9ULZ3 195 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 KIF16BQ96L93 1317 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 FGD6Q6ZV73 1430 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 ST20-MTHFSA0A0A6YYL1 179 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 HSP90AB3PQ58FF7 597 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 CCDC112Q8NEF3 446 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 RTF1Q92541 710 aaKnown RBP10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 ZNF592Q92610 1267 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 DEF6Q9H4E7 631 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 ZMYM4Q5VZL5 1548 aa10.29□□□□□ -0.76
NHLRC3-201ENST00000379599 PKP1Q13835 747 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 ZNF526Q8TF50 670 aaPredicted RBP10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 GTF3C6Q969F1 213 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 C16orf45Q96MC5 204 aaPredicted RBP10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 NPHP1O15259 732 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 E2F4Q16254 413 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 SPC24Q8NBT2 197 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 CCDC191Q8NCU4 936 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 CCDC9Q9Y3X0 531 aaKnown RBP10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 PLEKHH2Q8IVE3 1493 aa10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 BLMP54132 1417 aaPredicted RBP10.28□□□□□ -0.76
NHLRC3-201ENST00000379599 CCDC146Q8IYE0 955 aa10.27□□□□□ -0.76
NHLRC3-201ENST00000379599 ZNF397Q8NF99 534 aaPredicted RBP10.27□□□□□ -0.76
NHLRC3-201ENST00000379599 PLCD4Q9BRC7 762 aa10.27□□□□□ -0.76
NHLRC3-201ENST00000379599 POLKQ9UBT6 870 aa10.27□□□□□ -0.76
NHLRC3-201ENST00000379599 BCORL1Q5H9F3 1711 aa10.27□□□□□ -0.76
NHLRC3-201ENST00000379599 IRF6O14896 467 aa10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 POLR3GO15318 223 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 CREBRFQ8IUR6 639 aa10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 LCMT1Q9UIC8 334 aa10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 REC8O95072 547 aa10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 KMT5BQ4FZB7 885 aa10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 RNF217Q8TC41 542 aa10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
NHLRC3-201ENST00000379599 TEX35Q5T0J7 233 aa10.26□□□□□ -0.77
NHLRC3-201ENST00000379599 CXorf56Q9H5V9 222 aa10.26□□□□□ -0.77
NHLRC3-201ENST00000379599 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
NHLRC3-201ENST00000379599 SMTNL1A8MU46 457 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 U2SURPO15042 1029 aaKnown RBP10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 MCCP23508 829 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 SYCP1Q15431 976 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 ZNF446Q9NWS9 450 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 SUFUQ9UMX1 484 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 PRDM2Q13029 1718 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 NPC1L1Q9UHC9 1359 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 CEP120Q8N960 986 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 SLC4A1APQ9BWU0 796 aaKnown RBP10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 DONSONQ9NYP3 566 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 LRRFIP2Q9Y608 721 aaKnown RBP10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 MBD3O95983 291 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 SYAP1Q96A49 352 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 NESP48681 1621 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
NHLRC3-201ENST00000379599 AK9Q5TCS8 1911 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 TTC31Q49AM3 519 aaPredicted RBP10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 TXLNBQ8N3L3 684 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 TNNQ9UQP3 1299 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 ZMYM3Q14202 1370 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 SEMA3FQ13275 785 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 BCL2L13Q9BXK5 485 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 CWC15Q9P013 229 aaKnown RBP10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 CCDC91Q7Z6B0 441 aa10.24□□□□□ -0.77
NHLRC3-201ENST00000379599 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
NHLRC3-201ENST00000379599 OS9Q13438 667 aaPredicted RBP10.23□□□□□ -0.77
NHLRC3-201ENST00000379599 NOM1Q5C9Z4 860 aaKnown RBP10.23□□□□□ -0.77
NHLRC3-201ENST00000379599 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
NHLRC3-201ENST00000379599 ZSCAN26Q16670 478 aa10.23□□□□□ -0.77
NHLRC3-201ENST00000379599 FBXO38Q6PIJ6 1188 aa10.23□□□□□ -0.77
NHLRC3-201ENST00000379599 BMS1Q14692 1282 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 NFATC2IPQ8NCF5 419 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 NKTRP30414 1462 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 APAF1O14727 1248 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 UVSSAQ2YD98 709 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 KIF2CQ99661 725 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 RPRD2Q5VT52 1461 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 RLBP1P12271 317 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 HCLS1P14317 486 aaPredicted RBP10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 FAM184AQ8NB25 1140 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 KCNF1Q9H3M0 494 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 SH3BP1Q9Y3L3 701 aa10.22□□□□□ -0.77
NHLRC3-201ENST00000379599 CUX1P39880 1505 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms