RNA–Protein interactions for RNA: ENST00000379268.6

TNFRSF18-203, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 1,179 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-203ENST00000379268 POLR3AO14802 1390 aaPredicted RBP30.28■■■□□ 2.44
TNFRSF18-203ENST00000379268 PLEKHG3A1L390 1219 aa30.28■■■□□ 2.44
TNFRSF18-203ENST00000379268 NEUROD1Q13562 356 aa30.27■■■□□ 2.44
TNFRSF18-203ENST00000379268 ACEP12821 1306 aa30.26■■■□□ 2.44
TNFRSF18-203ENST00000379268 NBPF8Q3BBV2 869 aa30.26■■■□□ 2.43
TNFRSF18-203ENST00000379268 CRYBG1Q9Y4K1 1723 aa30.25■■■□□ 2.43
TNFRSF18-203ENST00000379268 CCDC9Q9Y3X0 531 aaKnown RBP30.25■■■□□ 2.43
TNFRSF18-203ENST00000379268 COL14A1Q05707 1796 aaKnown RBP30.25■■■□□ 2.43
TNFRSF18-203ENST00000379268 SRPK2P78362 688 aaKnown RBP30.24■■■□□ 2.43
TNFRSF18-203ENST00000379268 CCDC125Q86Z20 511 aa30.24■■■□□ 2.43
TNFRSF18-203ENST00000379268 TRPM1Q7Z4N2 1603 aa30.23■■■□□ 2.43
TNFRSF18-203ENST00000379268 ONECUT3O60422 494 aaPredicted RBP30.23■■■□□ 2.43
TNFRSF18-203ENST00000379268 BTG4Q9NY30 223 aa30.23■■■□□ 2.43
TNFRSF18-203ENST00000379268 QRICH2Q9H0J4 1663 aa30.23■■■□□ 2.43
TNFRSF18-203ENST00000379268 EP400Q96L91 3159 aa30.21■■■□□ 2.43
TNFRSF18-203ENST00000379268 NRAPQ86VF7 1730 aa30.21■■■□□ 2.43
TNFRSF18-203ENST00000379268 BRWD3Q6RI45 1802 aa30.2■■■□□ 2.43
TNFRSF18-203ENST00000379268 SEPT12Q8IYM1 358 aa30.19■■■□□ 2.42
TNFRSF18-203ENST00000379268 CABP2Q9NPB3 220 aa30.18■■■□□ 2.42
TNFRSF18-203ENST00000379268 PRDM11Q9NQV5 511 aa30.18■■■□□ 2.42
TNFRSF18-203ENST00000379268 PPIP5K1Q6PFW1 1433 aa30.18■■■□□ 2.42
TNFRSF18-203ENST00000379268 ROCK2O75116 1388 aaKnown RBP30.16■■■□□ 2.42
TNFRSF18-203ENST00000379268 ABTB2Q8N961 1025 aa30.14■■■□□ 2.42
TNFRSF18-203ENST00000379268 PHRF1Q9P1Y6 1649 aaKnown RBP30.14■■■□□ 2.41
TNFRSF18-203ENST00000379268 NUTM2GQ5VZR2 741 aa30.13■■■□□ 2.41
TNFRSF18-203ENST00000379268 BRD4O60885 1362 aaPredicted RBP30.13■■■□□ 2.41
TNFRSF18-203ENST00000379268 EVC2Q86UK5 1308 aa30.12■■■□□ 2.41
TNFRSF18-203ENST00000379268 KIAA0232Q92628 1395 aa30.12■■■□□ 2.41
TNFRSF18-203ENST00000379268 KRT27Q7Z3Y8 459 aa30.1■■■□□ 2.41
TNFRSF18-203ENST00000379268 BLMP54132 1417 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF18-203ENST00000379268 SPATA31A5Q5VU36 1347 aa30.09■■■□□ 2.41
TNFRSF18-203ENST00000379268 SPATA31A7Q8IWB4 1347 aa30.09■■■□□ 2.41
TNFRSF18-203ENST00000379268 CABP1Q9NZU7 370 aa30.09■■■□□ 2.41
TNFRSF18-203ENST00000379268 ZC3H6P61129 1189 aaKnown RBP30.08■■■□□ 2.41
TNFRSF18-203ENST00000379268 FAM98CQ17RN3 349 aaKnown RBP30.08■■■□□ 2.41
TNFRSF18-203ENST00000379268 NLRP13Q86W25 1043 aa30.08■■■□□ 2.41
TNFRSF18-203ENST00000379268 A0A0G2JS52 829 aa30.07■■■□□ 2.4
TNFRSF18-203ENST00000379268 MYT1Q01538 1121 aa30.07■■■□□ 2.4
TNFRSF18-203ENST00000379268 CHRNA2Q15822 529 aa30.06■■■□□ 2.4
TNFRSF18-203ENST00000379268 USP19O94966 1318 aa30.05■■■□□ 2.4
TNFRSF18-203ENST00000379268 TRIM26Q12899 539 aaPredicted RBP30.03■■■□□ 2.4
TNFRSF18-203ENST00000379268 USP6P35125 1406 aa30.03■■■□□ 2.4
TNFRSF18-203ENST00000379268 NRKQ7Z2Y5 1582 aa30.03■■■□□ 2.4
TNFRSF18-203ENST00000379268 CPDO75976 1380 aa30.03■■■□□ 2.4
TNFRSF18-203ENST00000379268 SF3B2Q13435 895 aaKnown RBP30.01■■■□□ 2.39
TNFRSF18-203ENST00000379268 TONSLQ96HA7 1378 aa30.01■■■□□ 2.39
TNFRSF18-203ENST00000379268 SPATA31A1Q5TZJ5 1347 aa30■■■□□ 2.39
TNFRSF18-203ENST00000379268 GCP02774 474 aa30■■■□□ 2.39
TNFRSF18-203ENST00000379268 ZRANB1Q9UGI0 708 aa30■■■□□ 2.39
TNFRSF18-203ENST00000379268 ZNF692Q9BU19 519 aaPredicted RBP29.99■■■□□ 2.39
TNFRSF18-203ENST00000379268 STRN4Q9NRL3 753 aa29.99■■■□□ 2.39
TNFRSF18-203ENST00000379268 EVA1CP58658 441 aa29.98■■■□□ 2.39
TNFRSF18-203ENST00000379268 CARD11Q9BXL7 1154 aa29.97■■■□□ 2.39
TNFRSF18-203ENST00000379268 THSD7AQ9UPZ6 1657 aa29.97■■■□□ 2.39
TNFRSF18-203ENST00000379268 SSH2Q76I76 1423 aa29.96■■■□□ 2.39
TNFRSF18-203ENST00000379268 SBNO2Q9Y2G9 1366 aa29.96■■■□□ 2.39
TNFRSF18-203ENST00000379268 NLRP6P59044 892 aa29.96■■■□□ 2.39
TNFRSF18-203ENST00000379268 CAMTA1Q9Y6Y1 1673 aa29.95■■■□□ 2.39
TNFRSF18-203ENST00000379268 LMO7Q8WWI1 1683 aa29.94■■■□□ 2.38
TNFRSF18-203ENST00000379268 AKAP12Q02952 1782 aa29.92■■■□□ 2.38
TNFRSF18-203ENST00000379268 DEFB132Q7Z7B7 95 aa29.91■■■□□ 2.38
TNFRSF18-203ENST00000379268 BARGINQ6ZT62 677 aa29.9■■■□□ 2.38
TNFRSF18-203ENST00000379268 SLIT3O75094 1523 aa29.9■■■□□ 2.38
TNFRSF18-203ENST00000379268 PIK3C2AO00443 1686 aa29.89■■■□□ 2.38
TNFRSF18-203ENST00000379268 LARP1Q6PKG0 1096 aaKnown RBP29.89■■■□□ 2.38
TNFRSF18-203ENST00000379268 USP35Q9P2H5 1018 aa29.89■■■□□ 2.38
TNFRSF18-203ENST00000379268 TTC21BQ7Z4L5 1316 aa29.89■■■□□ 2.38
TNFRSF18-203ENST00000379268 CPSF1Q10570 1443 aaKnown RBP29.88■■■□□ 2.37
TNFRSF18-203ENST00000379268 TTC21AQ8NDW8 1320 aa29.87■■■□□ 2.37
TNFRSF18-203ENST00000379268 BAG6P46379 1132 aa29.86■■■□□ 2.37
TNFRSF18-203ENST00000379268 TCP11L2Q8N4U5 519 aa29.86■■■□□ 2.37
TNFRSF18-203ENST00000379268 AATKQ6ZMQ8 1374 aa29.86■■■□□ 2.37
TNFRSF18-203ENST00000379268 FAM182BQ5T319 152 aa29.85■■■□□ 2.37
TNFRSF18-203ENST00000379268 THRAP3Q9Y2W1 955 aaKnown RBP29.84■■■□□ 2.37
TNFRSF18-203ENST00000379268 KTN1Q86UP2 1357 aaKnown RBP29.84■■■□□ 2.37
TNFRSF18-203ENST00000379268 COL5A2P05997 1499 aaPredicted RBP29.84■■■□□ 2.37
TNFRSF18-203ENST00000379268 RGPD1P0DJD0 1748 aa29.84■■■□□ 2.37
TNFRSF18-203ENST00000379268 KCNH5Q8NCM2 988 aa29.83■■■□□ 2.37
TNFRSF18-203ENST00000379268 ZBTB7CA1YPR0 619 aa29.82■■■□□ 2.36
TNFRSF18-203ENST00000379268 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
TNFRSF18-203ENST00000379268 MON2Q7Z3U7 1717 aa29.8■■■□□ 2.36
TNFRSF18-203ENST00000379268 PDE3BQ13370 1112 aa29.79■■■□□ 2.36
TNFRSF18-203ENST00000379268 PUS7Q96PZ0 661 aaKnown RBP29.79■■■□□ 2.36
TNFRSF18-203ENST00000379268 CRB1P82279 1406 aa29.79■■■□□ 2.36
TNFRSF18-203ENST00000379268 COL18A1P39060 1754 aa29.78■■■□□ 2.36
TNFRSF18-203ENST00000379268 ARHGEF25Q86VW2 580 aa29.77■■■□□ 2.36
TNFRSF18-203ENST00000379268 SRCAPQ6ZRS2 3230 aa29.76■■■□□ 2.35
TNFRSF18-203ENST00000379268 TMC1Q8TDI8 760 aa29.76■■■□□ 2.35
TNFRSF18-203ENST00000379268 SLC24A1O60721 1099 aa29.75■■■□□ 2.35
TNFRSF18-203ENST00000379268 DISP2A7MBM2 1401 aa29.74■■■□□ 2.35
TNFRSF18-203ENST00000379268 HDGFL2Q7Z4V5 671 aaPredicted RBP29.74■■■□□ 2.35
TNFRSF18-203ENST00000379268 CD163L1Q9NR16 1453 aa29.74■■■□□ 2.35
TNFRSF18-203ENST00000379268 TNS1Q9HBL0 1735 aaKnown RBP29.74■■■□□ 2.35
TNFRSF18-203ENST00000379268 EN1Q05925 392 aaPredicted RBP29.73■■■□□ 2.35
TNFRSF18-203ENST00000379268 PARP4Q9UKK3 1724 aaKnown RBP29.73■■■□□ 2.35
TNFRSF18-203ENST00000379268 TOM1L2Q6ZVM7 507 aa29.72■■■□□ 2.35
TNFRSF18-203ENST00000379268 SLC12A5Q9H2X9 1139 aa29.72■■■□□ 2.35
TNFRSF18-203ENST00000379268 AXIN2Q9Y2T1 843 aa29.72■■■□□ 2.35
TNFRSF18-203ENST00000379268 WDR17Q8IZU2 1322 aa29.71■■■□□ 2.35
TNFRSF18-203ENST00000379268 SOX12O15370 315 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms