RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PNISRQ8TF01 805 aaKnown RBP33.03■■■□□ 2.88
ECHDC3-201ENST00000379215 TTC21BQ7Z4L5 1316 aa33.03■■■□□ 2.88
ECHDC3-201ENST00000379215 SSH2Q76I76 1423 aa33.03■■■□□ 2.88
ECHDC3-201ENST00000379215 SCAF1Q9H7N4 1312 aaKnown RBP33.02■■■□□ 2.88
ECHDC3-201ENST00000379215 C1orf167Q5SNV9 1468 aa33■■■□□ 2.87
ECHDC3-201ENST00000379215 CENPBP07199 599 aaPredicted RBP33■■■□□ 2.87
ECHDC3-201ENST00000379215 ESCO1Q5FWF5 840 aa33■■■□□ 2.87
ECHDC3-201ENST00000379215 FAM9BQ8IZU0 186 aa33■■■□□ 2.87
ECHDC3-201ENST00000379215 KIF1AQ12756 1690 aa32.99■■■□□ 2.87
ECHDC3-201ENST00000379215 COG3Q96JB2 828 aa32.98■■■□□ 2.87
ECHDC3-201ENST00000379215 MST1RQ04912 1400 aa32.97■■■□□ 2.87
ECHDC3-201ENST00000379215 NME9Q86XW9 330 aa32.95■■■□□ 2.87
ECHDC3-201ENST00000379215 INSRP06213 1382 aa32.95■■■□□ 2.87
ECHDC3-201ENST00000379215 XIRP1Q702N8 1843 aaKnown RBP32.94■■■□□ 2.86
ECHDC3-201ENST00000379215 TNNT2P45379 298 aaPredicted RBP32.94■■■□□ 2.86
ECHDC3-201ENST00000379215 CFAP53Q96M91 514 aa32.93■■■□□ 2.86
ECHDC3-201ENST00000379215 AATKQ6ZMQ8 1374 aa32.91■■■□□ 2.86
ECHDC3-201ENST00000379215 OVOS2A0A0J9YW53 1432 aa32.9■■■□□ 2.86
ECHDC3-201ENST00000379215 OVOS2Q6IE36 1432 aa32.9■■■□□ 2.86
ECHDC3-201ENST00000379215 USP31Q70CQ4 1352 aa32.9■■■□□ 2.86
ECHDC3-201ENST00000379215 PSME1Q06323 249 aa32.88■■■□□ 2.85
ECHDC3-201ENST00000379215 MTHFSP49914 203 aa32.88■■■□□ 2.85
ECHDC3-201ENST00000379215 WDR43Q15061 677 aaKnown RBP eCLIP32.88■■■□□ 2.85
ECHDC3-201ENST00000379215 ORAI2Q96SN7 254 aa32.88■■■□□ 2.85
ECHDC3-201ENST00000379215 HNRNPUQ00839 825 aaKnown RBP eCLIP32.84■■■□□ 2.85
ECHDC3-201ENST00000379215 USP54Q70EL1 1684 aa32.82■■■□□ 2.85
ECHDC3-201ENST00000379215 SMG6Q86US8 1419 aaKnown RBP32.82■■■□□ 2.84
ECHDC3-201ENST00000379215 PIK3C2AO00443 1686 aa32.82■■■□□ 2.84
ECHDC3-201ENST00000379215 AEBP2Q6ZN18 517 aaPredicted RBP32.8■■■□□ 2.84
ECHDC3-201ENST00000379215 ZRANB1Q9UGI0 708 aa32.8■■■□□ 2.84
ECHDC3-201ENST00000379215 FOXO3O43524 673 aa32.79■■■□□ 2.84
ECHDC3-201ENST00000379215 PAK3O75914 559 aaPredicted RBP32.79■■■□□ 2.84
ECHDC3-201ENST00000379215 NPHP3Q7Z494 1330 aa32.77■■■□□ 2.84
ECHDC3-201ENST00000379215 ABTB2Q8N961 1025 aa32.77■■■□□ 2.84
ECHDC3-201ENST00000379215 BLMP54132 1417 aaPredicted RBP32.77■■■□□ 2.84
ECHDC3-201ENST00000379215 LTBP4Q8N2S1 1624 aa32.77■■■□□ 2.84
ECHDC3-201ENST00000379215 PNPLA6Q8IY17 1366 aa32.77■■■□□ 2.84
ECHDC3-201ENST00000379215 POLKQ9UBT6 870 aa32.76■■■□□ 2.83
ECHDC3-201ENST00000379215 CDK12Q9NYV4 1490 aaPredicted RBP32.75■■■□□ 2.83
ECHDC3-201ENST00000379215 NLRP6P59044 892 aa32.75■■■□□ 2.83
ECHDC3-201ENST00000379215 SLAIN2Q9P270 581 aa32.74■■■□□ 2.83
ECHDC3-201ENST00000379215 KRT28Q7Z3Y7 464 aa32.73■■■□□ 2.83
ECHDC3-201ENST00000379215 NUDCQ9Y266 331 aa32.73■■■□□ 2.83
ECHDC3-201ENST00000379215 COL3A1P02461 1466 aaPredicted RBP32.72■■■□□ 2.83
ECHDC3-201ENST00000379215 ADAMTS8Q9UP79 889 aa32.72■■■□□ 2.83
ECHDC3-201ENST00000379215 ZBED9Q6R2W3 1325 aa32.71■■■□□ 2.83
ECHDC3-201ENST00000379215 TRPM3Q9HCF6 1732 aaPredicted RBP32.71■■■□□ 2.83
ECHDC3-201ENST00000379215 SHPRHQ149N8 1683 aa32.71■■■□□ 2.83
ECHDC3-201ENST00000379215 SBNO1A3KN83 1393 aa32.7■■■□□ 2.83
ECHDC3-201ENST00000379215 BRINP3Q76B58 766 aa32.69■■■□□ 2.82
ECHDC3-201ENST00000379215 MAP2P11137 1827 aaKnown RBP32.68■■■□□ 2.82
ECHDC3-201ENST00000379215 DIAPH1O60610 1272 aaKnown RBP32.66■■■□□ 2.82
ECHDC3-201ENST00000379215 KIF24Q5T7B8 1368 aa32.66■■■□□ 2.82
ECHDC3-201ENST00000379215 EMILIN1Q9Y6C2 1016 aa32.66■■■□□ 2.82
ECHDC3-201ENST00000379215 PPM1GO15355 546 aaPredicted RBP32.65■■■□□ 2.82
ECHDC3-201ENST00000379215 KCNH5Q8NCM2 988 aa32.65■■■□□ 2.82
ECHDC3-201ENST00000379215 MARF1Q9Y4F3 1742 aaKnown RBP32.64■■■□□ 2.82
ECHDC3-201ENST00000379215 RRS1Q15050 365 aaKnown RBP32.63■■■□□ 2.81
ECHDC3-201ENST00000379215 PXDNQ92626 1479 aa32.63■■■□□ 2.81
ECHDC3-201ENST00000379215 XPCQ01831 940 aaPredicted RBP32.62■■■□□ 2.81
ECHDC3-201ENST00000379215 FBLN1P23142 703 aa32.61■■■□□ 2.81
ECHDC3-201ENST00000379215 ALS2Q96Q42 1657 aa32.6■■■□□ 2.81
ECHDC3-201ENST00000379215 TNS3Q68CZ2 1445 aa32.6■■■□□ 2.81
ECHDC3-201ENST00000379215 NUTM2GQ5VZR2 741 aa32.6■■■□□ 2.81
ECHDC3-201ENST00000379215 SLIT3O75094 1523 aa32.59■■■□□ 2.81
ECHDC3-201ENST00000379215 ARHGEF10O15013 1369 aa32.59■■■□□ 2.81
ECHDC3-201ENST00000379215 FLT4P35916 1363 aa32.59■■■□□ 2.81
ECHDC3-201ENST00000379215 USP19O94966 1318 aa32.58■■■□□ 2.81
ECHDC3-201ENST00000379215 MAP3K19Q56UN5 1328 aa32.57■■■□□ 2.8
ECHDC3-201ENST00000379215 U2AF1L5P0DN76 240 aaPredicted RBP32.57■■■□□ 2.8
ECHDC3-201ENST00000379215 U2AF1Q01081 240 aaKnown RBP eCLIP32.57■■■□□ 2.8
ECHDC3-201ENST00000379215 NGEFQ8N5V2 710 aa32.57■■■□□ 2.8
ECHDC3-201ENST00000379215 PNNQ9H307 717 aaKnown RBP32.57■■■□□ 2.8
ECHDC3-201ENST00000379215 RTL1A6NKG5 1358 aa32.57■■■□□ 2.8
ECHDC3-201ENST00000379215 SOX12O15370 315 aa32.55■■■□□ 2.8
ECHDC3-201ENST00000379215 LMOD2Q6P5Q4 547 aa32.55■■■□□ 2.8
ECHDC3-201ENST00000379215 NFAT5O94916 1531 aa32.55■■■□□ 2.8
ECHDC3-201ENST00000379215 SOS2Q07890 1332 aaPredicted RBP32.55■■■□□ 2.8
ECHDC3-201ENST00000379215 U2SURPO15042 1029 aaKnown RBP32.55■■■□□ 2.8
ECHDC3-201ENST00000379215 SPATA31A3Q5VYP0 1347 aa32.53■■■□□ 2.8
ECHDC3-201ENST00000379215 AMPHP49418 695 aa32.53■■■□□ 2.8
ECHDC3-201ENST00000379215 IL13P35225 146 aa32.52■■■□□ 2.8
ECHDC3-201ENST00000379215 RUNDC1Q96C34 613 aa32.52■■■□□ 2.8
ECHDC3-201ENST00000379215 NHSL1Q5SYE7 1610 aa32.52■■■□□ 2.8
ECHDC3-201ENST00000379215 DDX17Q92841 729 aaKnown RBP32.51■■■□□ 2.8
ECHDC3-201ENST00000379215 PEAK1Q9H792 1746 aa32.51■■■□□ 2.8
ECHDC3-201ENST00000379215 MED1Q15648 1581 aaPredicted RBP32.49■■■□□ 2.79
ECHDC3-201ENST00000379215 GCP02774 474 aa32.48■■■□□ 2.79
ECHDC3-201ENST00000379215 CCDC146Q8IYE0 955 aa32.48■■■□□ 2.79
ECHDC3-201ENST00000379215 PHRF1Q9P1Y6 1649 aaKnown RBP32.47■■■□□ 2.79
ECHDC3-201ENST00000379215 IQSEC2Q5JU85 1478 aa32.47■■■□□ 2.79
ECHDC3-201ENST00000379215 FCHSD2O94868 740 aa32.47■■■□□ 2.79
ECHDC3-201ENST00000379215 PDE3BQ13370 1112 aa32.45■■■□□ 2.79
ECHDC3-201ENST00000379215 NCBP3Q53F19 620 aaKnown RBP32.45■■■□□ 2.79
ECHDC3-201ENST00000379215 HOXC9P31274 260 aa32.44■■■□□ 2.78
ECHDC3-201ENST00000379215 EIF4A2Q14240 407 aaKnown RBP32.44■■■□□ 2.78
ECHDC3-201ENST00000379215 HSP90AB2PQ58FF8 381 aa32.44■■■□□ 2.78
ECHDC3-201ENST00000379215 TOM1O60784 492 aa32.43■■■□□ 2.78
ECHDC3-201ENST00000379215 NEFMP07197 916 aa32.43■■■□□ 2.78
ECHDC3-201ENST00000379215 ROBO1Q9Y6N7 1651 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms