RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ALS2Q96Q42 1657 aa19.8■□□□□ 0.76
PRPF18-202ENST00000378572 FAM83GA6ND36 823 aa19.79■□□□□ 0.76
PRPF18-202ENST00000378572 SF3B2Q13435 895 aaKnown RBP19.79■□□□□ 0.76
PRPF18-202ENST00000378572 BTG4Q9NY30 223 aa19.79■□□□□ 0.76
PRPF18-202ENST00000378572 ATP7BP35670 1465 aa19.77■□□□□ 0.76
PRPF18-202ENST00000378572 BLMP54132 1417 aaPredicted RBP19.77■□□□□ 0.76
PRPF18-202ENST00000378572 NUDT16Q96DE0 195 aaKnown RBP19.77■□□□□ 0.76
PRPF18-202ENST00000378572 COL14A1Q05707 1796 aaKnown RBP19.77■□□□□ 0.76
PRPF18-202ENST00000378572 NRAPQ86VF7 1730 aa19.77■□□□□ 0.75
PRPF18-202ENST00000378572 FAM98CQ17RN3 349 aaKnown RBP19.75■□□□□ 0.75
PRPF18-202ENST00000378572 KRT27Q7Z3Y8 459 aa19.75■□□□□ 0.75
PRPF18-202ENST00000378572 CDK19Q9BWU1 502 aa19.75■□□□□ 0.75
PRPF18-202ENST00000378572 PRDM11Q9NQV5 511 aa19.75■□□□□ 0.75
PRPF18-202ENST00000378572 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
PRPF18-202ENST00000378572 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
PRPF18-202ENST00000378572 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
PRPF18-202ENST00000378572 DEFB132Q7Z7B7 95 aa19.71■□□□□ 0.75
PRPF18-202ENST00000378572 CRYBG1Q9Y4K1 1723 aa19.71■□□□□ 0.75
PRPF18-202ENST00000378572 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
PRPF18-202ENST00000378572 TOPAZ1Q8N9V7 1692 aa19.7■□□□□ 0.74
PRPF18-202ENST00000378572 PHRF1Q9P1Y6 1649 aaKnown RBP19.69■□□□□ 0.74
PRPF18-202ENST00000378572 KIAA0232Q92628 1395 aa19.69■□□□□ 0.74
PRPF18-202ENST00000378572 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
PRPF18-202ENST00000378572 ACEP12821 1306 aa19.69■□□□□ 0.74
PRPF18-202ENST00000378572 CHRNA2Q15822 529 aa19.68■□□□□ 0.74
PRPF18-202ENST00000378572 STRN4Q9NRL3 753 aa19.68■□□□□ 0.74
PRPF18-202ENST00000378572 ONECUT3O60422 494 aaPredicted RBP19.68■□□□□ 0.74
PRPF18-202ENST00000378572 ZC3H6P61129 1189 aaKnown RBP19.68■□□□□ 0.74
PRPF18-202ENST00000378572 CCDC61Q9Y6R9 512 aa19.68■□□□□ 0.74
PRPF18-202ENST00000378572 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
PRPF18-202ENST00000378572 SPATA31A5Q5VU36 1347 aa19.66■□□□□ 0.74
PRPF18-202ENST00000378572 SPATA31A7Q8IWB4 1347 aa19.66■□□□□ 0.74
PRPF18-202ENST00000378572 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
PRPF18-202ENST00000378572 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
PRPF18-202ENST00000378572 BAG6P46379 1132 aa19.65■□□□□ 0.74
PRPF18-202ENST00000378572 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
PRPF18-202ENST00000378572 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
PRPF18-202ENST00000378572 PPIP5K1Q6PFW1 1433 aa19.64■□□□□ 0.73
PRPF18-202ENST00000378572 FAM182BQ5T319 152 aa19.63■□□□□ 0.73
PRPF18-202ENST00000378572 CABP2Q9NPB3 220 aa19.63■□□□□ 0.73
PRPF18-202ENST00000378572 EVA1CP58658 441 aa19.62■□□□□ 0.73
PRPF18-202ENST00000378572 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
PRPF18-202ENST00000378572 PLEKHG3A1L390 1219 aa19.62■□□□□ 0.73
PRPF18-202ENST00000378572 NRKQ7Z2Y5 1582 aa19.61■□□□□ 0.73
PRPF18-202ENST00000378572 SRCAPQ6ZRS2 3230 aa19.61■□□□□ 0.73
PRPF18-202ENST00000378572 ZBTB7CA1YPR0 619 aa19.61■□□□□ 0.73
PRPF18-202ENST00000378572 RGPD1P0DJD0 1748 aa19.6■□□□□ 0.73
PRPF18-202ENST00000378572 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
PRPF18-202ENST00000378572 SPATA31A1Q5TZJ5 1347 aa19.59■□□□□ 0.73
PRPF18-202ENST00000378572 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
PRPF18-202ENST00000378572 L3MBTL2Q969R5 705 aa19.59■□□□□ 0.73
PRPF18-202ENST00000378572 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
PRPF18-202ENST00000378572 SSH2Q76I76 1423 aa19.57■□□□□ 0.72
PRPF18-202ENST00000378572 PSDA5PKW4 1024 aaPredicted RBP19.56■□□□□ 0.72
PRPF18-202ENST00000378572 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
PRPF18-202ENST00000378572 EN1Q05925 392 aaPredicted RBP19.56■□□□□ 0.72
PRPF18-202ENST00000378572 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
PRPF18-202ENST00000378572 USP19O94966 1318 aa19.54■□□□□ 0.72
PRPF18-202ENST00000378572 TRPM1Q7Z4N2 1603 aa19.54■□□□□ 0.72
PRPF18-202ENST00000378572 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
PRPF18-202ENST00000378572 EVC2Q86UK5 1308 aa19.54■□□□□ 0.72
PRPF18-202ENST00000378572 LARP1Q6PKG0 1096 aaKnown RBP19.54■□□□□ 0.72
PRPF18-202ENST00000378572 PDE3BQ13370 1112 aa19.53■□□□□ 0.72
PRPF18-202ENST00000378572 CPDO75976 1380 aa19.53■□□□□ 0.72
PRPF18-202ENST00000378572 CAMTA1Q9Y6Y1 1673 aa19.52■□□□□ 0.72
PRPF18-202ENST00000378572 USP6P35125 1406 aa19.52■□□□□ 0.72
PRPF18-202ENST00000378572 GCP02774 474 aa19.52■□□□□ 0.72
PRPF18-202ENST00000378572 NLRP6P59044 892 aa19.52■□□□□ 0.72
PRPF18-202ENST00000378572 TNS1Q9HBL0 1735 aaKnown RBP19.52■□□□□ 0.72
PRPF18-202ENST00000378572 TRIM37O94972 964 aa19.51■□□□□ 0.71
PRPF18-202ENST00000378572 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
PRPF18-202ENST00000378572 LMO7Q8WWI1 1683 aa19.51■□□□□ 0.71
PRPF18-202ENST00000378572 BRD4O60885 1362 aaPredicted RBP19.51■□□□□ 0.71
PRPF18-202ENST00000378572 TCP11L2Q8N4U5 519 aa19.51■□□□□ 0.71
PRPF18-202ENST00000378572 TIMELESSQ9UNS1 1208 aa19.5■□□□□ 0.71
PRPF18-202ENST00000378572 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
PRPF18-202ENST00000378572 COL5A2P05997 1499 aaPredicted RBP19.48■□□□□ 0.71
PRPF18-202ENST00000378572 SOX12O15370 315 aa19.47■□□□□ 0.71
PRPF18-202ENST00000378572 APBA3O96018 575 aa19.47■□□□□ 0.71
PRPF18-202ENST00000378572 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
PRPF18-202ENST00000378572 EZH2Q15910 746 aaKnown RBP19.47■□□□□ 0.71
PRPF18-202ENST00000378572 LRP5O75197 1615 aa19.47■□□□□ 0.71
PRPF18-202ENST00000378572 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
PRPF18-202ENST00000378572 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
PRPF18-202ENST00000378572 SLIT3O75094 1523 aa19.45■□□□□ 0.7
PRPF18-202ENST00000378572 THRAP3Q9Y2W1 955 aaKnown RBP19.45■□□□□ 0.7
PRPF18-202ENST00000378572 CRB1P82279 1406 aa19.44■□□□□ 0.7
PRPF18-202ENST00000378572 TOM1L2Q6ZVM7 507 aa19.44■□□□□ 0.7
PRPF18-202ENST00000378572 AATKQ6ZMQ8 1374 aa19.42■□□□□ 0.7
PRPF18-202ENST00000378572 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
PRPF18-202ENST00000378572 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
PRPF18-202ENST00000378572 TTC21BQ7Z4L5 1316 aa19.41■□□□□ 0.7
PRPF18-202ENST00000378572 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
PRPF18-202ENST00000378572 KTN1Q86UP2 1357 aaKnown RBP19.4■□□□□ 0.7
PRPF18-202ENST00000378572 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
PRPF18-202ENST00000378572 ZNF692Q9BU19 519 aaPredicted RBP19.4■□□□□ 0.7
PRPF18-202ENST00000378572 CPSF1Q10570 1443 aaKnown RBP19.4■□□□□ 0.7
PRPF18-202ENST00000378572 CAMKK2Q96RR4 588 aa19.39■□□□□ 0.7
PRPF18-202ENST00000378572 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.7
PRPF18-202ENST00000378572 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms